Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30176.Seq
(834 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal p... 65 3e-10
Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal p... 65 3e-10
Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal p... 65 3e-10
Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal p... 65 3e-10
Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal p... 65 3e-10
BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal... 65 3e-10
BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal... 65 3e-10
U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15 prot... 52 2e-06
CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein. 52 3e-06
BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal... 52 3e-06
AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated ant... 46 2e-04
AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens ... 38 0.034
>Z97634-6|CAI95596.1| 218|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 218
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>Z97634-5|CAM26404.1| 194|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 194
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 48.0 bits (109), Expect = 4e-05
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTY 674
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF 194
>Z97634-4|CAI95595.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LK DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKASGEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>Z97634-3|CAI95594.1| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>Z97634-2|CAM26403.1| 240|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 240
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>BC000990-1|AAH00990.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>BC000507-1|AAH00507.2| 256|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 256
Score = 65.3 bits (152), Expect = 3e-10
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG--FQKRDDRRRRVPHYWVPVLKRTVVRS 444
G+ ++++PIP+ FP E G+WGGE + G + D +R+ W P L S
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYS 116
Query: 445 EVLNTHLSVTVTDRTISLINDPMGL 519
E+L+ +VTVT RT+ LI++ GL
Sbjct: 117 EILDKKFTVTVTMRTLDLIDEAYGL 141
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 138 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 195
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 196 IPEEEAEWVG 205
>U19796-1|AAC50181.1| 128|Homo sapiens melanoma antigen p15
protein.
Length = 128
Score = 52.4 bits (120), Expect = 2e-06
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S ++LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 10 AYGLDFYILKTPKEDLCSKFGMELKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 67
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 68 IPEEEAEWVG 77
>CR541751-1|CAG46551.1| 128|Homo sapiens MRPL28 protein.
Length = 128
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 10 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 67
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 68 IPEEEAEWVG 77
>BT009857-1|AAP88859.1| 128|Homo sapiens mitochondrial ribosomal
protein L28 protein.
Length = 128
Score = 51.6 bits (118), Expect = 3e-06
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +3
Query: 507 SYGFDHYLLKTPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTYLSS 683
+YG D Y+LKTP DL S + LK+ +L L P+ H DP+++ IY++Y+ + +
Sbjct: 10 AYGLDFYILKTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF--A 67
Query: 684 YTPEXIEWYG 713
E EW G
Sbjct: 68 IPEEEAEWVG 77
>AE006463-6|AAK61226.1| 131|Homo sapiens melanoma-associated
antigen recgonized by T lymphocytes ; P15 protein.
Length = 131
Score = 45.6 bits (103), Expect = 2e-04
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +3
Query: 507 SYGFDHYLLK---TPACDLVSVLALKLKKPILTELMNGCPR-HAYDPKKQMGIYEEYQTY 674
+YG D Y+LK TP DL S + LK+ +L L P+ H DP+++ IY++Y+ +
Sbjct: 10 AYGLDFYILKASGTPKEDLCSKFGMDLKRGMLLRLARQDPQLHPEDPERRAAIYDKYKEF 69
Query: 675 LSSYTPEXIEWYG 713
+ E EW G
Sbjct: 70 --AIPEEEAEWVG 80
>AK096844-1|BAC04874.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ39525 fis, clone PUAEN2002758. ).
Length = 158
Score = 38.3 bits (85), Expect = 0.034
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 271 GETYPIQNIPIPLKFPAEINEGIWGGEAVVKG 366
G+ ++++PIP+ FP E G+WGGE + G
Sbjct: 57 GQRERVEDVPIPIYFPPESQRGLWGGEGWILG 88
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,206,148
Number of Sequences: 237096
Number of extensions: 2203421
Number of successful extensions: 3784
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3767
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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