Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30175.Seq
(878 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 90 2e-18
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 90 2e-18
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 85 8e-17
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 85 8e-17
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 34 0.12
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 34 0.12
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z66519-5|CAA91382.2| 500|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 1.1
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 31 1.1
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.9
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 4.4
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 29 5.8
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 29 5.8
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 29 5.8
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p... 28 7.7
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 7.7
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 7.7
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDII 438
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL RL ++
Sbjct: 52 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVM 111
Query: 439 RPNVGQIREFIEKFPVRLTPGI 504
+PN Q+ +F+ +LT GI
Sbjct: 112 KPNHEQLEQFVNISKPKLTVGI 133
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKFYFNGXYAG 665
LV LH RG VYLVSGGFR LI PVAE L I I+AN + F G Y G
Sbjct: 136 LVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHG 187
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/82 (51%), Positives = 56/82 (68%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDII 438
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL RL ++
Sbjct: 49 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVM 108
Query: 439 RPNVGQIREFIEKFPVRLTPGI 504
+PN Q+ +F+ +LT GI
Sbjct: 109 KPNHEQLEQFVNISKPKLTVGI 130
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKFYFNGXYAG 665
LV LH RG VYLVSGGFR LI PVAE L I I+AN + F G Y G
Sbjct: 133 LVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHG 184
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALKKRLD 432
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL RL
Sbjct: 53 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQ 112
Query: 433 IIRPNVGQIREFIEKFPVRLTPGI 504
+++PN Q+ +F+ +LT GI
Sbjct: 113 VMKPNHEQLEQFVNISKPKLTVGI 136
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKFYFNGXYAG 665
LV LH RG VYLVSGGFR LI PVAE L I I+AN + F G Y G
Sbjct: 139 LVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHG 190
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 84.6 bits (200), Expect = 8e-17
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +1
Query: 259 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTF--QEALKKRLD 432
++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F ++AL RL
Sbjct: 36 VWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDALAARLQ 95
Query: 433 IIRPNVGQIREFIEKFPVRLTPGI 504
+++PN Q+ +F+ +LT GI
Sbjct: 96 VMKPNHEQLEQFVNISKPKLTVGI 119
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = +3
Query: 510 LVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKFYFNGXYAG 665
LV LH RG VYLVSGGFR LI PVAE L I I+AN + F G Y G
Sbjct: 122 LVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHG 173
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -1
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 482 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 541
Query: 215 VRASSTSRTAGCFSNCKEPS 156
+ + S S + G P+
Sbjct: 542 MTSPSQSSSVGSSQGSTSPA 561
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = -1
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P S+ S +T P+ +SS S + S + + S SG S+G S S+P
Sbjct: 424 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 479
Query: 209 ASSTSRTAGCFSNCKEPS 156
+S + T+G + EPS
Sbjct: 480 SSLSPSTSGMSTLTSEPS 497
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -1
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 215 VRASSTSRTAGCFSNCKEPS 156
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = -1
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P S+ S +T P+ +SS S + S + + S SG S+G S S+P
Sbjct: 631 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Query: 209 ASSTSRTAGCFSNCKEPS 156
+S + T+G + EPS
Sbjct: 687 SSLSPSTSGMSTLTSEPS 704
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/80 (25%), Positives = 36/80 (45%)
Frame = -1
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STP 216
L P S +S LTS P P + SS S+ T Q+ S++ +++ + ++ T
Sbjct: 689 LSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSLESSTSGATTSSGSAGTT 748
Query: 215 VRASSTSRTAGCFSNCKEPS 156
+ + S S + G P+
Sbjct: 749 MTSPSQSSSVGSSQGSTSPA 768
Score = 33.5 bits (73), Expect = 0.20
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = -1
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
S V+ T+SP ASS+ PSS T+ STS T + ++ S + A+S+ + V S
Sbjct: 1500 STVASSTASP----AASSTAPSSTGTMSSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1555
Query: 200 TSRTAG 183
+S T+G
Sbjct: 1556 SS-TSG 1560
Score = 33.1 bits (72), Expect = 0.27
Identities = 24/76 (31%), Positives = 37/76 (48%)
Frame = -1
Query: 383 ASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRAS 204
+SA S + SS ASS+ PSS T+ STS T + ++ S + TS + V
Sbjct: 1745 SSAGSTVVSST-ASPAASSTAPSSTGTMSSTSSGTVGSTMSQSSTAASTTSHTGSTVTLG 1803
Query: 203 STSRTAGCFSNCKEPS 156
S+S ++ S + S
Sbjct: 1804 SSSTSSNQMSTSQGSS 1819
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = -1
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
S+V +S +++S++PSS T+ STS T + ++ S + A+S+ + V S
Sbjct: 1818 SSVGSTVASSTAGLVSTSTVPSSTGTMGSTSSGTVGSTISESSTTASASSQTGSTVTMGS 1877
Query: 200 TSRTAG 183
+S T+G
Sbjct: 1878 SS-TSG 1882
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = -1
Query: 338 LASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRT 189
+++S++PSS T+ STS T + ++ S + +S+ + V STS T
Sbjct: 1915 VSTSTVPSSTGTMGSTSSGTVGSTISESSTAASTSSQTGSTVTIGSTSGT 1964
Score = 29.9 bits (64), Expect = 2.5
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = -1
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P S+ S +T P+ +SS S + S + + S SG S+G S S+P
Sbjct: 631 PTGSSQSTIT----PEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
Query: 209 ASSTSRTAGCFSNCKEPS 156
+S + T+G + EPS
Sbjct: 687 SSLSPSTSGMSTLTSEPS 704
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -1
Query: 338 LASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRTAG 183
+++S++PSS T+ STS T + ++ S + A+S+ + V S+S T+G
Sbjct: 1593 VSTSTVPSSTGTMGSTSSGTVGSTISESSTTASASSQTGSTVTMGSSS-TSG 1643
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = -1
Query: 338 LASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRTAG 183
+++S++PSS T+ STS T + ++ S + A+S+ + V S+S T+G
Sbjct: 1676 VSTSTVPSSTGTMGSTSSGTVGSTISESSTAASASSQTGSTVTMGSSS-TSG 1726
>Z66519-5|CAA91382.2| 500|Caenorhabditis elegans Hypothetical
protein B0334.5 protein.
Length = 500
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +2
Query: 506 QVSERVTRKRSHRISSFGRIQESXRTGRGET-KHPNYQHLR*STQVLFQWGIRWASMKTS 682
QV+ R +RS ++S I++ ++ PN + ST LF W +W ++
Sbjct: 74 QVTPRPIMRRSTQLSIIHHIRQPCQSNVPRICDAPNLETTATSTTKLFSWNSQWTCLR-- 131
Query: 683 PHSXSGGQRLMVRRLXGFSXVTS 751
S S G+RL RR G + +++
Sbjct: 132 --SYSNGRRL-GRRFSGITSISA 151
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1
Query: 362 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTS 195
++SP S++ PS+ T S+S T S+ ++S S ++++ ST + SST+
Sbjct: 482 STSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
+ V TS+ S+S PS+ T+ESTS T ++ + S S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 200 TSRT 189
+S T
Sbjct: 353 SSTT 356
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = -1
Query: 500 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 321
P +LT + + S P+ + +S S + + + S+ S T+ P + S+S
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTS----PSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 320 -PSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASST 198
PSS +T +T+ T + ++S + +T+ S ASST
Sbjct: 484 SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = -1
Query: 362 TSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTS 195
++SP S++ PS+ T S+S T S+ ++S S ++++ ST + SST+
Sbjct: 482 STSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTSTQQSSTT 537
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1
Query: 380 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASS 201
+ V TS+ S+S PS+ T+ESTS T ++ + S S T + S+ + +S
Sbjct: 294 TTVPTSTSTVTTAMSTSTSTPSTSTTIESTS-TTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 200 TSRT 189
+S T
Sbjct: 353 SSTT 356
Score = 29.5 bits (63), Expect = 3.3
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = -1
Query: 500 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 321
P +LT + + S P+ + +S S + + + S+ S T+ P + S+S
Sbjct: 428 PTTTLTTSTASTSTTEPSTSTVTTS----PSTSPVTSTVTSSSSSSTTVTTPTSTESTST 483
Query: 320 -PSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASST 198
PSS +T +T+ T + ++S + +T+ S ASST
Sbjct: 484 SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASST 525
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = -1
Query: 389 PIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVR 210
P + AVS T++P P N + ++P + + + V +S + GA S +T
Sbjct: 2228 PTSGAVSSTTNTPSPTNQSPVTLPPPSVATAGPTGPILTVVPVSSAPTSGAVSSTATAAP 2287
Query: 209 ASSTSRTAGCFS 174
+T++T+ S
Sbjct: 2288 VITTTKTSSVLS 2299
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAVLNNSGQSVGATSR*ST 219
+PP S S T P S+ P+S T +T+ K T S + S + TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 218 PVRASSTSRTA 186
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 395 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTS-KQTQSAVLNNSGQSVGATSR*ST 219
+PP S S T P S+ P+S T +T+ K T S + S + TS +T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 218 PVRASSTSRTA 186
+T+ T+
Sbjct: 643 TTPQPTTTTTS 653
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = -1
Query: 386 IASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRA 207
+AS+ TSS ++ASSS PS TV + S T + S + G T + +
Sbjct: 489 VASSTIAPTSSQESSSIASSSAPSQSTTVITVS-TTATVSSGQSTSTFGTTIGQGSSFGS 547
Query: 206 SSTSRTAGCFSNCKEPS 156
S+ T G S PS
Sbjct: 548 STIQTTQGTSSFAPIPS 564
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = -2
Query: 151 CFFSE*RNYYDRIHFNLIY*LRYYLSFVKVTSVIMKDPLCGKYDE 17
C+++E NY++ N + Y+ SF + + I+++ L GK+++
Sbjct: 1502 CYWNEGMNYWETDCGNFYGAIIYFCSFYLIITYIVRNLLVGKFEK 1546
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -1
Query: 401 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*S 222
V +PPIA S +P P++ S S + ST + + + S Q SR S
Sbjct: 10 VNIPPIAKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQ----VSRES 65
Query: 221 TPVRAS 204
P+RAS
Sbjct: 66 PPIRAS 71
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -1
Query: 401 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*S 222
V +PPIA S +P P++ S S + ST + + + S Q SR S
Sbjct: 10 VNIPPIAKTRSTSHLAPTPEHHRSVSYEDTTTASTSTDSVPEVRIRSESSQ----VSRES 65
Query: 221 TPVRAS 204
P+RAS
Sbjct: 66 PPIRAS 71
>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
protein F40G12.3 protein.
Length = 1099
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -1
Query: 353 PFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSGQSVGATSR*STPVRASSTSRT 189
P + + S ++ + EST TQS S S G T+ T R S S+T
Sbjct: 522 PHRDDSTTDSKTTTSLDYESTPTSTQSTASTKSSTSEGITTSEQTSHRMFSASKT 576
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 355 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 447
D+VK +T E M GNM + RLD+ P+
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical protein
F40H6.5 protein.
Length = 1288
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = -1
Query: 320 PSSCMTVESTSKQTQSAVLNNSGQSVGATSR---*STPVRASSTSRTAGCFS 174
PS+ + STS+ T SA L ++ +++ +TS+ ST R +S T+G S
Sbjct: 913 PSTPLETASTSQSTPSATLTSTTENIPSTSKIPETSTTQRPTSPILTSGATS 964
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -1
Query: 392 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLN--NSGQSV 243
P + S TS+P +AS+ PS+ +V STS Q +A + NSG+ +
Sbjct: 2859 PTTSKQASASTSTPSTSAVASAQTPST--SVPSTSSQAAAAAASSANSGEDI 2908
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,606,038
Number of Sequences: 27780
Number of extensions: 365058
Number of successful extensions: 1198
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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