Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30174.Seq
         (853 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000498E21 Cluster: myotubularin-related protein; n=...    35   3.0  
UniRef50_A4VDB8 Cluster: Phosphatidylinositol 4-kinase; n=1; Tet...    33   9.1  

>UniRef50_UPI0000498E21 Cluster: myotubularin-related protein; n=1;
            Entamoeba histolytica HM-1:IMSS|Rep: myotubularin-related
            protein - Entamoeba histolytica HM-1:IMSS
          Length = 920

 Score = 34.7 bits (76), Expect = 3.0
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
 Frame = -1

Query: 523  LRAIDSVTSMFSVSSKGFS-REVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGKLFS 347
            L+ IDSV  ++S+    F   EV L EL   ++     +F F+ W E +S  + +   +S
Sbjct: 810  LQFIDSVYQLYSLFPSEFEFNEVFLKELLFQLYSCYFCNFRFNCWNEFNSFGNRVMNFYS 869

Query: 346  VTTYEVLLLFDSINE 302
               YE  +LF   NE
Sbjct: 870  FLDYEEEILFSFSNE 884


>UniRef50_A4VDB8 Cluster: Phosphatidylinositol 4-kinase; n=1;
           Tetrahymena thermophila SB210|Rep: Phosphatidylinositol
           4-kinase - Tetrahymena thermophila SB210
          Length = 1748

 Score = 33.1 bits (72), Expect = 9.1
 Identities = 20/75 (26%), Positives = 33/75 (44%)
 Frame = +3

Query: 288 SDSNHSLIESNKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAKINXXXXXXXXXXXX 467
           +D NHS+ ESNKS       +K   + D +  +    EN +E P KI+            
Sbjct: 675 NDINHSIKESNKSMNENNFGQKLKQSDDQFNCELIDLENRQESPCKIDSITQKLELNEDF 734

Query: 468 EKPLEETENIDVTES 512
           +  +   +  D+T+S
Sbjct: 735 DPSIFRLQTEDLTKS 749


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,741,088
Number of Sequences: 1657284
Number of extensions: 10272397
Number of successful extensions: 22811
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22805
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75013275813
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)