Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30174.Seq
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.1  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   7.1  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -2

Query: 639  PRDIGP*LCSH-RWPFATGTFLSFIVKSMTS 550
            P DI P LC+H  + FA   F + IVK+  S
Sbjct: 1419 PEDIDPDLCTHIVYGFAVLDFENLIVKAHDS 1449


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 597 FATGTFLSFIVKSMTSIGTTVSLI 526
           F TG+F   +V ++ S GTT  L+
Sbjct: 75  FRTGSFTFLMVVAVLSSGTTFKLV 98


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 597 FATGTFLSFIVKSMTSIGTTVSLI 526
           F TG+F   +V ++ S GTT  L+
Sbjct: 75  FRTGSFTFLMVVAVLSSGTTFKLV 98


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = -2

Query: 639 PRDIGP*LCSH-RWPFAT 589
           P DI P LC+H  + FAT
Sbjct: 543 PEDINPSLCTHIIYAFAT 560


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 318 NKSKTSYVVTEKSLPNADVYESDSSHSENVKEKPAK 425
           N  KT Y +  KSLP     +S   H+++  ++  K
Sbjct: 186 NTGKTQYNLNSKSLPR-QYSQSRGRHNQSRSKRQPK 220


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 496 MFSVSSKGFSREVLLSEL 443
           +FSVSS  ++ EVL S L
Sbjct: 229 LFSVSSSSYNCEVLFSFL 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,674
Number of Sequences: 336
Number of extensions: 2683
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)