Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30174.Seq
         (853 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL833970-1|CAD38815.1|  199|Homo sapiens hypothetical protein pr...    34   0.75 
AF532837-1|AAN15046.1|  101|Homo sapiens T-cell receptor alpha p...    32   2.3  
BC013568-1|AAH13568.1|  493|Homo sapiens phosphatidylinositol gl...    31   4.0  
AL034380-11|CAB92120.1|  493|Homo sapiens phosphatidylinositol g...    31   4.0  
AK000484-1|BAA91196.1|  493|Homo sapiens protein ( Homo sapiens ...    31   4.0  

>AL833970-1|CAD38815.1|  199|Homo sapiens hypothetical protein
           protein.
          Length = 199

 Score = 33.9 bits (74), Expect = 0.75
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 611 EHSYGPMSRGLVSLMTMEMWHYPTXAYPV 697
           E+ YGP   GLVS+     +HYP+ + PV
Sbjct: 147 ENGYGPSPSGLVSITVRSKFHYPSFSQPV 175


>AF532837-1|AAN15046.1|  101|Homo sapiens T-cell receptor alpha
           protein.
          Length = 101

 Score = 32.3 bits (70), Expect = 2.3
 Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
 Frame = -2

Query: 669 HISIVIRDTKPRDIGP*LCS--HRWPFATGTFLSFI 568
           ++S++IRD++P D    LC+  H++ F TGT L+ I
Sbjct: 60  YVSLLIRDSQPSDSATYLCAVKHQFYFGTGTSLTVI 95


>BC013568-1|AAH13568.1|  493|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class V protein.
          Length = 493

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 595 CNWHIFIIYSQINDIYWDYG 536
           C W + +IYS I D+YW+ G
Sbjct: 296 CFWDVPLIYSYIQDVYWNVG 315


>AL034380-11|CAB92120.1|  493|Homo sapiens phosphatidylinositol
           glycan anchor biosynthesis, class V protein.
          Length = 493

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 595 CNWHIFIIYSQINDIYWDYG 536
           C W + +IYS I D+YW+ G
Sbjct: 296 CFWDVPLIYSYIQDVYWNVG 315


>AK000484-1|BAA91196.1|  493|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20477 fis, clone KAT07271. ).
          Length = 493

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -1

Query: 595 CNWHIFIIYSQINDIYWDYG 536
           C W + +IYS I D+YW+ G
Sbjct: 296 CFWDVPLIYSYIQDVYWNVG 315


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,734,608
Number of Sequences: 237096
Number of extensions: 1535837
Number of successful extensions: 6636
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6626
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)