Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30174.Seq
         (853 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown prot...    32   1.1  
AE014296-2132|AAF49924.2| 1215|Drosophila melanogaster CG32104-P...    32   1.1  
AE014297-3638|AAF56344.1|  841|Drosophila melanogaster CG10951-P...    29   8.1  

>AF225958-1|AAF35374.1| 1215|Drosophila melanogaster unknown
           protein.
          Length = 1215

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = -1

Query: 535 LTDXLRAIDSVTSMFSVSSKGFSREVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGK 356
           L   L A  ++  +FS+ ++GF  +VL   +SK +F    F    +   + +  + AL  
Sbjct: 373 LQQRLSAFGAIAGIFSIYNQGFYDQVLSLPISK-IFFLLRFGLDDNAPAQLEVVSRALSN 431

Query: 355 LFSVTTYEVLL 323
           LF   T EVLL
Sbjct: 432 LFYNETDEVLL 442


>AE014296-2132|AAF49924.2| 1215|Drosophila melanogaster CG32104-PB
           protein.
          Length = 1215

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = -1

Query: 535 LTDXLRAIDSVTSMFSVSSKGFSREVLLSELSKSVFIFAGFSFTFSEWLESDS*TSALGK 356
           L   L A  ++  +FS+ ++GF  +VL   +SK +F    F    +   + +  + AL  
Sbjct: 373 LQQRLSAFGAIAGIFSIYNQGFYDQVLSLPISK-IFFLLRFGLDDNAPAQLEVVSRALSN 431

Query: 355 LFSVTTYEVLL 323
           LF   T EVLL
Sbjct: 432 LFYNETDEVLL 442


>AE014297-3638|AAF56344.1|  841|Drosophila melanogaster CG10951-PA
           protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 554 VIDLTINDKNVPVANGHL*EHSYGPMSRGLVSLMTMEMW-HYPT 682
           ++D+ ++D +  V N     +++G  + G + L  +E W HYP+
Sbjct: 454 IVDVAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPS 497


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,691,257
Number of Sequences: 53049
Number of extensions: 500041
Number of successful extensions: 1132
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)