Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30167.Seq
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105294-1|AAI05295.1|  125|Homo sapiens hypothetical protein HS...    72   2e-12
BC029482-1|AAH29482.1|  125|Homo sapiens hypothetical protein HS...    72   2e-12
BC017172-1|AAH17172.1|  125|Homo sapiens hypothetical protein HS...    72   2e-12
AF110774-1|AAF14857.1|  125|Homo sapiens adrenal gland protein A...    72   2e-12

>BC105294-1|AAI05295.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCPNLXDNFRFLKG 541
           EFL+  H          G L CP     F   +G
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRG 112



 Score = 37.9 bits (84), Expect = 0.049
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +1

Query: 496 LDLSKSGRQFPISKGIPNMXLNEAEVQ 576
           L   +SGR FPIS+GIPNM L+E E +
Sbjct: 98  LQCPESGRMFPISRGIPNMLLSEEETE 124


>BC029482-1|AAH29482.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCPNLXDNFRFLKG 541
           EFL+  H          G L CP     F   +G
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRG 112



 Score = 35.1 bits (77), Expect = 0.35
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +1

Query: 496 LDLSKSGRQFPISKGIPNMXLNEAEVQ 576
           L   +SGR FPIS+GIPNM L+  E +
Sbjct: 98  LQCPESGRMFPISRGIPNMLLSGEETE 124


>BC017172-1|AAH17172.1|  125|Homo sapiens hypothetical protein
           HSPC152 protein.
          Length = 125

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCPNLXDNFRFLKG 541
           EFL+  H          G L CP     F   +G
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRG 112



 Score = 37.9 bits (84), Expect = 0.049
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +1

Query: 496 LDLSKSGRQFPISKGIPNMXLNEAEVQ 576
           L   +SGR FPIS+GIPNM L+E E +
Sbjct: 98  LQCPESGRMFPISRGIPNMLLSEEETE 124


>AF110774-1|AAF14857.1|  125|Homo sapiens adrenal gland protein
           AD-001 protein.
          Length = 125

 Score = 72.1 bits (169), Expect = 2e-12
 Identities = 33/94 (35%), Positives = 52/94 (55%)
 Frame = +2

Query: 260 GYPLAINATDIKVKEVDFNPEFISRVIPKLDWEVLWVAADSIGHSDGLPRSLENKYDENE 439
           G+PL + AT++++  V+FNP F++R+IPK++W     AAD++     +P+     Y+ENE
Sbjct: 20  GFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNL-RLIQVPKGPVEGYEENE 78

Query: 440 EFLKKAHKXXXXXXXXXGHLTCPNLXDNFRFLKG 541
           EFL+  H          G L CP     F   +G
Sbjct: 79  EFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRG 112



 Score = 37.9 bits (84), Expect = 0.049
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +1

Query: 496 LDLSKSGRQFPISKGIPNMXLNEAEVQ 576
           L   +SGR FPIS+GIPNM L+E E +
Sbjct: 98  LQCPESGRMFPISRGIPNMLLSEEETE 124


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,664,155
Number of Sequences: 237096
Number of extensions: 1733502
Number of successful extensions: 3308
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3304
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)