Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30164.Seq
(888 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 161 3e-38
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 116 1e-24
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 110 4e-23
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 95 2e-18
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 69 2e-10
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 60 1e-07
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 45 0.002
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 44 0.007
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 42 0.016
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 41 0.037
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 40 0.11
UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 39 0.15
UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog ... 38 0.45
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 36 1.4
UniRef50_Q6CL50 Cluster: Similarities with sp|Q9Y909 Aeropyrum p... 36 1.4
UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1; Methanop... 36 1.8
UniRef50_Q59WG1 Cluster: Putative uncharacterized protein; n=1; ... 35 2.4
UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:... 35 3.2
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 34 5.6
UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48... 34 5.6
UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1... 33 9.7
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 161 bits (390), Expect = 3e-38
Identities = 99/224 (44%), Positives = 128/224 (57%), Gaps = 2/224 (0%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWL 582
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F G K + + +
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYC--I 175
Query: 583 LIP*YTVTVNRLNVRKKRKH*MLSAMMTSAV--VANNWAQIKEMVELPLRSSFTVSRLLE 756
+ P + ++++ + L+ + + AQIKEMVELPLR + + +
Sbjct: 176 VAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHP-ALFKAIG 234
Query: 757 *KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLINGPGIMS 888
K PRGIL ++G TGK T + ETGA FLINGP IMS
Sbjct: 235 VKPPRGIL-LYGPPGTGK-TLIARAVANETGAFFFLINGPEIMS 276
Score = 138 bits (333), Expect = 2e-31
Identities = 76/118 (64%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCRKQL
Sbjct: 154 VRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQL 213
Query: 690 GAN*GDGGVATAVILH--CFKAIGVKASTRHSPCMGPPXNRKKHSLARAVANGNRGFF 857
+ + H FKAIGVK R GPP K +ARAVAN FF
Sbjct: 214 AQ---IKEMVELPLRHPALFKAIGVK-PPRGILLYGPPGTGKT-LIARAVANETGAFF 266
Score = 101 bits (241), Expect = 3e-20
Identities = 48/65 (73%), Positives = 61/65 (93%)
Frame = +2
Query: 62 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 241
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 242 RKETV 256
R+E V
Sbjct: 64 RREAV 68
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 116 bits (278), Expect = 1e-24
Identities = 57/87 (65%), Positives = 67/87 (77%), Gaps = 2/87 (2%)
Frame = +3
Query: 507 QVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQ 686
Q+RGGMRAVEFKVVETDP P+CIV+PDTVIH +G+ IKRE+EEE LN +GYDDIGGCRKQ
Sbjct: 123 QIRGGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDAIKREDEEENLNEIGYDDIGGCRKQ 182
Query: 687 LGAN*GDGGVATAVILH--CFKAIGVK 761
L + + + H FKAIGVK
Sbjct: 183 LAS---IKEMVELPLRHPALFKAIGVK 206
Score = 102 bits (245), Expect = 1e-20
Identities = 48/66 (72%), Positives = 62/66 (93%)
Frame = +2
Query: 59 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 238
MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1 MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59
Query: 239 RRKETV 256
+R++TV
Sbjct: 60 KRRDTV 65
Score = 47.2 bits (107), Expect = 6e-04
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Frame = +1
Query: 436 NLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASWLLIP*YTVTVNR 615
NLF+VYL+PYF EAYRP+ + D F+ G K + + ++ P +
Sbjct: 99 NLFDVYLRPYFQEAYRPVRKGDIFQIRGGMRAVEFKVVETDPGPYC--IVSPDTVIHFEG 156
Query: 616 LNVRKKRKH*MLSAMMTSAV--VANNWAQIKEMVELPLR 726
++++ + L+ + + A IKEMVELPLR
Sbjct: 157 DAIKREDEEENLNEIGYDDIGGCRKQLASIKEMVELPLR 195
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 110 bits (265), Expect = 4e-23
Identities = 48/100 (48%), Positives = 63/100 (63%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + CI + DD CP EKI+M D + I PC V YG RVH+L
Sbjct: 49 LVKGKKHRSTVCIAMEDDECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLL 108
Query: 403 PIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFRSAGA 522
PIDD+VE LTG+LFE +LKPYF+E+YRP+ + D+F GA
Sbjct: 109 PIDDTVENLTGDLFENFLKPYFLESYRPVKKGDSFVCRGA 148
Score = 81.8 bits (193), Expect = 2e-14
Identities = 36/52 (69%), Positives = 44/52 (84%)
Frame = +3
Query: 513 RGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDI 668
RG MR+VEFKVVE DP +CIV+PDT+IH +G+PI R E+EEAL+ VGYDDI
Sbjct: 146 RGAMRSVEFKVVEVDPGDYCIVSPDTIIHSEGDPIHR-EDEEALDGVGYDDI 196
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/49 (59%), Positives = 40/49 (81%)
Frame = +2
Query: 110 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETV 256
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TV
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTV 59
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 95.5 bits (227), Expect = 2e-18
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ CI+L+D++ + KIR+ D+V + CP + YGK++ +L
Sbjct: 59 LIKGKKRHSTICIILNDNDLDEGKIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVL 118
Query: 403 PIDDSVEGLT-GNLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASW 579
PIDD++EGL LFE++LKPYF E+YRP+ + D F G S K + +
Sbjct: 119 PIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGG---FMSVEFKVVEVDPDDF 175
Query: 580 LLIP*YTVTVNRLNVRKKRKH*MLSAMMTSAV--VANNWAQIKEMVELPLRSSFTVSRLL 753
++ TV + K+ L + + AQI+EM+ELPLR + + L
Sbjct: 176 CIVSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHP-GLFKTL 234
Query: 754 E*KLPRGIL 780
K PRG+L
Sbjct: 235 GVKPPRGVL 243
Score = 94.3 bits (224), Expect = 4e-18
Identities = 41/60 (68%), Positives = 52/60 (86%)
Frame = +3
Query: 510 VRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
VRGG +VEFKVVE DP FCIV+PDTVI+ +G+PIKR++EE+ L+ +GYDDIGGC+KQL
Sbjct: 156 VRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEK-LDEIGYDDIGGCKKQL 214
Score = 70.1 bits (164), Expect = 7e-11
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +2
Query: 65 DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 244
D K+ D + L +K RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R
Sbjct: 6 DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65
Query: 245 KETV 256
T+
Sbjct: 66 HSTI 69
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 68.9 bits (161), Expect = 2e-10
Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLGAN*G 704
R +EFKVV TDPSP CIV I +GEPI R+E E VGY D+GG K+LG
Sbjct: 174 REIEFKVVLTDPSPACIVMDGGEIFYEGEPIDRDEHERENTKVGYSDLGGLGKELGMI-R 232
Query: 705 DGGVATAVILHCFKAIGVKASTRHSPCMGPPXNRKKHSLARAVAN-GNRGFFLFN 866
+ FK +GVK R GPP K ++ +A+AN FFL N
Sbjct: 233 EQIELPLRHPELFKYLGVK-PPRGILLTGPP-GCGKTTIGKAIANEAGAYFFLLN 285
Score = 40.3 bits (90), Expect = 0.064
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 27/209 (12%)
Frame = +1
Query: 343 DVVSIAPCPSVKYGKRVHILPIDDSVEGL-----------------------TGNLFEVY 453
D+V + P ++ Y KR+ ++P + +EGL T +LF++
Sbjct: 86 DIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYTVKQGEDGKPAPAPFPGPTYDLFDIC 145
Query: 454 LKPYFMEAYRPIHRDDTFRSAGACAPSSSK--WSKQIHHHFASWLLIP*YTVTVNRLNVR 627
+ PYF + RP+ +TF+ P + + + + + +++ + +
Sbjct: 146 IAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVVLTDPSPACIVMDGGEIFYEGEPID 205
Query: 628 KKRKH*MLSAMMTSAV--VANNWAQIKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLV 801
+ + + S + + I+E +ELPLR + + L K PRGIL + G
Sbjct: 206 RDEHERENTKVGYSDLGGLGKELGMIREQIELPLRHP-ELFKYLGVKPPRGIL-LTGPPG 263
Query: 802 TGKNTHWLVLLLMETGASSFLINGPGIMS 888
GK T + E GA FL+NG IMS
Sbjct: 264 CGKTTIGKAIA-NEAGAYFFLLNGAEIMS 291
Score = 39.1 bits (87), Expect = 0.15
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +2
Query: 122 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
NR IV + D+S + LS K+ L LF+GD V LKG+ K T A
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHA 57
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 59.7 bits (138), Expect = 1e-07
Identities = 28/46 (60%), Positives = 37/46 (80%)
Frame = +2
Query: 122 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TVA
Sbjct: 17 NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVA 62
Score = 56.4 bits (130), Expect = 9e-07
Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 3/225 (1%)
Frame = +1
Query: 223 LAQGQTPQGNRCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 402
L +G+ + I +S+ E + M D ++I P S+ +VHIL
Sbjct: 51 LLEGKNNKKTVAIAISNRQ-DKESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHIL 109
Query: 403 PIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHRDDTFRSAGACAPSSSKWSKQIHHHFASW 579
P DS+ G NL + YL PYF++AYRP+ + D F A + +
Sbjct: 110 PFQDSISGTNEKNLTQNYLIPYFLDAYRPVSKGDCFVVKMAKEIEFKIIATEPEDMGVVG 169
Query: 580 LLIP*YTV--TVNRLNVRKKRKH*MLSAMMTSAVVANNWAQIKEMVELPLRSSFTVSRLL 753
+ YT TV R + K + + + IK +VEL LR+ ++ +
Sbjct: 170 PITILYTEGGTVKR-EIENKEQFDNQNGYANIGGMNKQLTIIKTIVELQLRNP-SILKAS 227
Query: 754 E*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLINGPGIMS 888
+ G+L + G +GK T + L +ETGA+ + +NG ++S
Sbjct: 228 GLQTINGLL-ISGASGSGK-TLIVKALAIETGANIYFLNGSELVS 270
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEE--EEALNAVGYDDIGGCRKQL 689
+ +EFK++ T+P +V P T+++ +G +KRE E E+ N GY +IGG KQL
Sbjct: 151 KEIEFKIIATEPEDMGVVGPITILYTEGGTVKREIENKEQFDNQNGYANIGGMNKQL 207
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 119 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE +A
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLA 317
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 576 VAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
V + +I D E + RE+ EE + + Y+D+GG +KQL
Sbjct: 448 VGDNAIITLDEEYLNREDYEEHTDDITYEDLGGMKKQL 485
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 43.6 bits (98), Expect = 0.007
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 573 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLGAN*GDGGVATAVILH--CFK 746
++ ++VI G + RE +++ VGYDDIGG KQL + +LH FK
Sbjct: 336 LIVGESVIDSSGNYLTRENHDDSYGEVGYDDIGGMNKQLSK---IRELIELPLLHPELFK 392
Query: 747 AIGVKASTRHSPCMGPPXNRKKHSLARAVAN 839
+G+ + GPP + K +ARA+AN
Sbjct: 393 TVGIN-PPKGVILHGPPGSGKT-LVARAIAN 421
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 42.3 bits (95), Expect = 0.016
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +3
Query: 573 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLGAN*GDGGVATAVILH--CFK 746
+++ ++V+ C G + RE+ + + +GYD+IGG KQL + +LH +K
Sbjct: 332 LISGESVLDCSGPSLTREQHDASYGELGYDEIGGMDKQLSK---IRELIELPLLHPEVYK 388
Query: 747 AIGVKASTRHSPCMGPPXNRKKHSLARAVAN 839
A+G+ + + GPP K +ARA+A+
Sbjct: 389 AVGI-SPPKGVILHGPPGTGKT-LIARAIAS 417
Score = 33.9 bits (74), Expect = 5.6
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +1
Query: 691 AQIKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLIN 870
++I+E++ELPL V + + P+G++ + G TGK T + ETGA +IN
Sbjct: 371 SKIRELIELPLLHP-EVYKAVGISPPKGVI-LHGPPGTGK-TLIARAIASETGAHCVVIN 427
Query: 871 GPGIMS 888
GP IMS
Sbjct: 428 GPEIMS 433
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 41.1 bits (92), Expect = 0.037
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +2
Query: 119 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVA 259
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE VA
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVA 148
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 525 RAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
R +EFKVV P I+ VI +PI RE + V YD IGG KQ+
Sbjct: 140 RVIEFKVVNCSPEEEVIIQDKEVILYRNQPIHRENIN--FSTVSYDSIGGLHKQI 192
>UniRef50_Q1GSQ3 Cluster: AAA family ATPase, CDC48 subfamily; n=15;
cellular organisms|Rep: AAA family ATPase, CDC48
subfamily - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 773
Score = 39.1 bits (87), Expect = 0.15
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +1
Query: 694 QIKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLING 873
Q++EMVELPLR + R L PRG+L + G TGK T + E+ A FLING
Sbjct: 218 QLREMVELPLRYP-ELFRRLGVDPPRGVL-LHGPPGTGK-TRLARAVANESEAQFFLING 274
Query: 874 PGIM 885
P IM
Sbjct: 275 PEIM 278
>UniRef50_Q58556 Cluster: Cell division cycle protein 48 homolog
MJ1156; n=64; cellular organisms|Rep: Cell division
cycle protein 48 homolog MJ1156 - Methanococcus
jannaschii
Length = 903
Score = 37.5 bits (83), Expect = 0.45
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +1
Query: 694 QIKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLING 873
+++EM+ELP+R +L + P+G+L V G TGK T + E GA+ ++ING
Sbjct: 190 KVREMIELPMRHPELFEKL-GIEPPKGVLLV-GPPGTGK-TLLAKAVANEAGANFYVING 246
Query: 874 PGIMS 888
P IMS
Sbjct: 247 PEIMS 251
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 573 IVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQL 689
++ ++VI G + RE+++ + VGYDDIGG KQL
Sbjct: 312 LIVGESVIDSGGNYLSREDDD-SFGEVGYDDIGGMNKQL 349
>UniRef50_Q6CL50 Cluster: Similarities with sp|Q9Y909 Aeropyrum
pernix Putative uncharacterized protein APE2475; n=1;
Kluyveromyces lactis|Rep: Similarities with sp|Q9Y909
Aeropyrum pernix Putative uncharacterized protein
APE2475 - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 85
Score = 35.9 bits (79), Expect = 1.4
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = -2
Query: 887 DMIPGPLIKKEEAPVSISNSTSQ*VFFPVTRRPHTWRMPRGSFHSNSLETVKDDRSGNST 708
DM GPLIKK+ APVS++ + + V PV P+ ++P G +L + +GNST
Sbjct: 25 DMTSGPLIKKKNAPVSLATALAIRV-LPVPGGPYI-KIPFGGLIPMALNSC-GCLNGNST 81
Query: 707 ISLI 696
SLI
Sbjct: 82 NSLI 85
>UniRef50_Q8TY20 Cluster: ATPase of the AAA+ class; n=1;
Methanopyrus kandleri|Rep: ATPase of the AAA+ class -
Methanopyrus kandleri
Length = 1249
Score = 35.5 bits (78), Expect = 1.8
Identities = 27/64 (42%), Positives = 36/64 (56%)
Frame = +1
Query: 697 IKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLINGP 876
I+E VELPL+ + L K P+G+L ++G TGK T + E GA + INGP
Sbjct: 227 IREYVELPLKRPELLKEL-GIKPPKGVL-LYGPPGTGK-TLLAKAVANECGAKFYSINGP 283
Query: 877 GIMS 888
IMS
Sbjct: 284 EIMS 287
>UniRef50_Q59WG1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 100
Score = 35.1 bits (77), Expect = 2.4
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = -2
Query: 887 DMIPGPLIKKEEAPVSISNSTSQ*VFFPVTRRPHTWRMPRGSFHSNSLETVKDDRSGNST 708
D+I GP IKK++APVS++ + + + PV P+ ++P G L GNST
Sbjct: 28 DIISGPFIKKKKAPVSLATALAI-MVLPVPGGPYI-KIPFGGLIPIDLNNC-GCLKGNST 84
Query: 707 ISLICAQLF 681
SLI A F
Sbjct: 85 NSLIWAICF 93
>UniRef50_Q74M89 Cluster: NEQ475; n=1; Nanoarchaeum equitans|Rep:
NEQ475 - Nanoarchaeum equitans
Length = 826
Score = 34.7 bits (76), Expect = 3.2
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +1
Query: 694 QIKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLING 873
+++E+VELPLR R L + P+G+L ++G TGK T + E+GA ING
Sbjct: 202 KVRELVELPLRHPEIFER-LGIEPPKGVL-LYGPPGTGK-TLLAKAVANESGAYFISING 258
Query: 874 PGIMS 888
P I+S
Sbjct: 259 PEIVS 263
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 33.9 bits (74), Expect = 5.6
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 188 MEQLQLFRGDTVLLKGKRRKETVA 259
M LQ+ RGD VLL G+R++ETVA
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVA 24
Score = 33.9 bits (74), Expect = 5.6
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +1
Query: 697 IKEMVELPLRSSFTVSRLLE*KLPRGILHVWGRLVTGKNTHWLVLLLMETGASSFLINGP 876
I+E+VELPLR + + + + PRG+L + G GK T + E GA+ +NGP
Sbjct: 212 IRELVELPLRFP-EIFKQVGVQTPRGVL-LHGSSGCGK-TLLAKAIANECGANFLTVNGP 268
Query: 877 GIMS 888
+MS
Sbjct: 269 EVMS 272
>UniRef50_Q0W6B6 Cluster: Putative cell division cycle protein 48;
n=1; uncultured methanogenic archaeon RC-I|Rep: Putative
cell division cycle protein 48 - Uncultured methanogenic
archaeon RC-I
Length = 942
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +3
Query: 537 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCRKQLG 692
F V T P+ I T + +P++ E+ E+ + + Y+DIGG R+++G
Sbjct: 142 FVVTNTRPAGTVIADMSTEVTISEKPVEAEKAEKTPH-ISYEDIGGLRREIG 192
>UniRef50_A1HPK1 Cluster: AAA family ATPase, CDC48 subfamily; n=1;
Thermosinus carboxydivorans Nor1|Rep: AAA family ATPase,
CDC48 subfamily - Thermosinus carboxydivorans Nor1
Length = 720
Score = 33.1 bits (72), Expect = 9.7
Identities = 42/142 (29%), Positives = 61/142 (42%)
Frame = +3
Query: 435 QSIRSILEAVLHGGLPSDPS*RHLQVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEP 614
Q IR LE +L+G LP + G RA F V+ T P ++ T I
Sbjct: 113 QDIRH-LERLLNG-LPVIIGDKIKVTLAGARAQYFTVIGTSPQGPVVINAATKITVT--- 167
Query: 615 IKREEEEEALNAVGYDDIGGCRKQLGAN*GDGGVATAVILHCFKAIGVKASTRHSPCMGP 794
K + +E+ Y+D+GG K+L + F+ +GV A + GP
Sbjct: 168 -KPDVQEDMSYCASYEDVGGLDKEL-QRIREMIELPLKYPEVFRQLGVDA-PKGVLLYGP 224
Query: 795 PXNRKKHSLARAVANGNRGFFL 860
P K +ARAVA+ +R FL
Sbjct: 225 PGTGKT-LMARAVASESRATFL 245
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 927,409,591
Number of Sequences: 1657284
Number of extensions: 19091093
Number of successful extensions: 50050
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 47905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50028
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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