Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30159.Seq
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.5  
AF317817-1|AAL18436.1|  137|Anopheles gambiae glucose-6-phosphat...    23   9.5  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.5  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 474 FCDVQVKIAHLKV*Q 430
           FCDV + IAH+ V Q
Sbjct: 679 FCDVWINIAHIYVEQ 693


>AF317817-1|AAL18436.1|  137|Anopheles gambiae glucose-6-phosphate
           dehydrogenase protein.
          Length = 137

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 604 SNSKYRGYCASKLSKLQLPE 663
           S++K+ GY  SKLS  +L E
Sbjct: 6   SDTKFIGYARSKLSVAELKE 25


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -1

Query: 82  HYVIRCYF 59
           HYVIRCY+
Sbjct: 101 HYVIRCYY 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,007
Number of Sequences: 2352
Number of extensions: 10053
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)