Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30156.Seq
(961 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 165 2e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 155 2e-36
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 144 2e-33
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 129 9e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 124 3e-27
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 121 3e-26
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 105 2e-21
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 99 1e-19
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 93 7e-18
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 90 7e-17
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 86 1e-15
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 79 2e-13
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 79 2e-13
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 78 4e-13
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 77 7e-13
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 73 8e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 1e-11
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 71 3e-11
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 71 6e-11
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 69 2e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 67 5e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 2e-09
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 65 2e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 65 3e-09
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 64 4e-09
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 64 5e-09
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 63 1e-08
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 62 2e-08
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 59 1e-07
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 58 3e-07
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 56 1e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 55 3e-06
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 55 3e-06
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 54 4e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 54 5e-06
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 53 1e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 52 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 52 3e-05
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 51 4e-05
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 50 7e-05
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 50 9e-05
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 49 2e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 49 2e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 48 3e-04
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 48 3e-04
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 48 4e-04
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 48 5e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 48 5e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 46 0.001
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 45 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 45 0.003
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 44 0.004
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 44 0.006
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 44 0.006
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 43 0.010
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 42 0.031
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.041
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 40 0.071
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 39 0.22
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 39 0.22
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 39 0.22
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.50
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.50
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.66
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 36 1.2
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.7
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 35 2.7
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 3.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 165 bits (400), Expect = 2e-39
Identities = 83/108 (76%), Positives = 88/108 (81%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHNRP 543
NGH+GLGVKCSKEVATAIRGAIILAKLS++ + GNKIGKPH P
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVP 181
Score = 54.8 bits (126), Expect = 3e-06
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSL---ISSSARP*MMRFLRSC 331
K + KEW+PVTKLGRLV++ KI LE IYLF K S + + +S + +++ +
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMP-- 111
Query: 332 LYRNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCQF*PVRRSYG 511
+ + + + + V +++ + L PVRR Y
Sbjct: 112 VQKQTRAGQRTRFKAFVAIGDYNGHVGLGV-KCSKEVATAIRGAIILAKLSIVPVRRGYW 170
Query: 512 VTR*ESHTTVPCKVXGQXWFPKQFRLIPAP 601
+ TVPCKV G+ RLIPAP
Sbjct: 171 GNKIGKPHTVPCKVTGRCG-SVLVRLIPAP 199
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 155 bits (375), Expect = 2e-36
Identities = 79/108 (73%), Positives = 84/108 (77%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 400 NGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHNRP 543
NGH+GL VKCSKEVATAIRGAIILAKLS++ + GNKIGKPH P
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTVP 121
Score = 39.5 bits (88), Expect = 0.12
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = +2
Query: 182 VPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSL---ISSSARP*MMRFLRSCLYRNKHV 352
+PVTKLG L+ + KI LE IYLF K S + + +S + +++ + K
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPV----QKQT 56
Query: 353 PDSAHVS-RHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCQF*PVRRSYGVTR*ES 529
H + +P+ + +++ + L PV R Y +
Sbjct: 57 CAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGK 116
Query: 530 HTTVPCKVXGQXWFPKQFRLIPAP 601
TVPCKV G+ LIPAP
Sbjct: 117 PHTVPCKVTGRC-SSVLVHLIPAP 139
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 144 bits (350), Expect = 2e-33
Identities = 67/110 (60%), Positives = 87/110 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 400 NGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHNRPLQ 549
+GH+GLG+KC+KEVATAIRGAII+ KLS++ + G +G PH P++
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVK 156
Score = 51.2 bits (117), Expect = 4e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 253
++++KEWVPVTKLGRLV+ GKI +E IYL+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLY 58
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 129 bits (312), Expect = 9e-29
Identities = 61/103 (59%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
Frame = +1
Query: 238 EHLLVF-LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 414
EH+ +F LPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 415 LGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHNRP 543
LGVK KEVA +I+G++ILAKL+++ + G+K+G+PH P
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHTIP 171
Score = 50.4 bits (115), Expect = 7e-05
Identities = 39/146 (26%), Positives = 62/146 (42%)
Frame = +2
Query: 164 EDQKEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSLISSSARP*MMRFLRSCLYRN 343
+D+ WVP TKLGRLV++GKI LE I+LF K + + ++ C +
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 344 KHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSCQF*PVRRSYGVTR* 523
+ + + + + A ++ + + L PVRR Y ++
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 524 ESHTTVPCKVXGQXWFPKQFRLIPAP 601
T+P KV G+ RLIPAP
Sbjct: 165 GEPHTIPTKVHGKCG-SVHVRLIPAP 189
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 124 bits (300), Expect = 3e-27
Identities = 61/100 (61%), Positives = 75/100 (75%)
Frame = +1
Query: 238 EHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 417
E L LP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GL
Sbjct: 55 EIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGL 113
Query: 418 GVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHN 537
G+K +KEVA AIR II+AKLSV+ + G +G+PH+
Sbjct: 114 GIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS 153
Score = 43.6 bits (98), Expect = 0.008
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKIDKLESIYL 250
++K WVPVTKLGRLV+ GKI +E I+L
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFL 58
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 121 bits (291), Expect = 3e-26
Identities = 61/78 (78%), Positives = 65/78 (83%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 490 TSPKKLRGNKIGKPHNRP 543
+ GNKIGKP+ P
Sbjct: 108 PLRQGYWGNKIGKPNTVP 125
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 105 bits (251), Expect = 2e-21
Identities = 52/66 (78%), Positives = 54/66 (81%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 400 NGHIGL 417
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 50.8 bits (116), Expect = 5e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 99.1 bits (236), Expect = 1e-19
Identities = 49/91 (53%), Positives = 60/91 (65%)
Frame = +1
Query: 262 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 441
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 442 ATAIRGAIILAKLSVLTSPKKLRGNKIGKPH 534
A+AIRGAI AK ++ L GKPH
Sbjct: 109 ASAIRGAIARAKCAIRPVRLGLWDGAQGKPH 139
Score = 35.9 bits (79), Expect = 1.5
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 253
++++ EW+P T +GRLV+ KI LE I+ F
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKF 45
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 93.5 bits (222), Expect = 7e-18
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 400 NGHIG 414
NG+ G
Sbjct: 62 NGYAG 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 90.2 bits (214), Expect = 7e-17
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +1
Query: 361 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHNR 540
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+L P+ GN+I KPH
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 541 P 543
P
Sbjct: 121 P 121
Score = 33.5 bits (73), Expect = 8.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 167 DQKEWVPVTKLGRLVREGKI 226
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 86.2 bits (204), Expect = 1e-15
Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +K
Sbjct: 90 IPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAK 148
Query: 436 EVATAIRGAIILAKLSVL--TSPKKLRGNKIGKPHNRPLQSXR 558
EV AI+ L + +S K++ G + + P+QS R
Sbjct: 149 EVQGAIQELCNLNQCQTQFDSSQKRILGKQDRLTTHSPMQSDR 191
Score = 44.0 bits (99), Expect = 0.006
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +2
Query: 170 QKEWVPVTKLGRLVREGKIDKLESIYLF 253
++EWVP+TKLGRLV+ GKI LE+I+ F
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQF 88
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 79.0 bits (186), Expect = 2e-13
Identities = 44/109 (40%), Positives = 61/109 (55%)
Frame = +1
Query: 160 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 339
QG + P K + + +L LPIKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFS-LPIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 340 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 486
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 79.0 bits (186), Expect = 2e-13
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 375
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 50.8 bits (116), Expect = 5e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 77.8 bits (183), Expect = 4e-13
Identities = 45/93 (48%), Positives = 58/93 (62%)
Frame = +1
Query: 253 FLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 432
+LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCS
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCS 74
Query: 433 KEVATAIRGAIILAKLSVLTSPKKLRGNKIGKP 531
K+V TA+ G + P+ GN I KP
Sbjct: 75 KKVGTAV-GLSSWSSFLSSCLPRDYCGNNIRKP 106
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 77.4 bits (182), Expect = 5e-13
Identities = 43/96 (44%), Positives = 61/96 (63%)
Frame = -2
Query: 549 LQGTVVWLSYLVTP*LLRTG*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLE 370
L G V + LVTP N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 19 LAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLE 78
Query: 369 TCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFD 262
L+GT L L HDL++ ++Q A+EEI+DLE F+
Sbjct: 79 ARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 77.0 bits (181), Expect = 7e-13
Identities = 49/99 (49%), Positives = 59/99 (59%)
Frame = +1
Query: 238 EHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 417
E L LPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 418 GVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPH 534
G+ EVA I+ IIL KL ++ + G+K KPH
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPH 157
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.3 bits (172), Expect = 8e-12
Identities = 39/93 (41%), Positives = 60/93 (64%)
Frame = +1
Query: 238 EHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 417
E L LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 418 GVKCSKEVATAIRGAIILAKLSVLTSPKKLRGN 516
+ KEVA+ IR AI AKL+++ +RGN
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMI---PVMRGN 100
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/78 (46%), Positives = 55/78 (70%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SK
Sbjct: 42 LPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSK 100
Query: 436 EVATAIRGAIILAKLSVL 489
EV AIR AI AKLS++
Sbjct: 101 EVGPAIRKAIAHAKLSLI 118
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/98 (36%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +K
Sbjct: 31 LPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAK 89
Query: 436 EVATAIRGAIILAKLSVLTSPKKLRGNK--IGKPHNRP 543
E A AI+ AI AKL+++ + + GKPH P
Sbjct: 90 EAAPAIKKAIDNAKLNIIEIKRGCGSWECGCGKPHTLP 127
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 70.5 bits (165), Expect = 6e-11
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 283 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 462
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 463 IILAKLSVLTSPKKLRGNKIGKPH 534
IIL + S+ + GNKI KPH
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPH 78
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 68.9 bits (161), Expect = 2e-10
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 375
K + E L LPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 46.8 bits (106), Expect = 8e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + KEW+P TKLG LV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 67.3 bits (157), Expect = 5e-10
Identities = 34/78 (43%), Positives = 52/78 (66%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G
Sbjct: 84 LPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDD 142
Query: 436 EVATAIRGAIILAKLSVL 489
+V AI+ AI +AKL+++
Sbjct: 143 QVGGAIQKAIDVAKLNII 160
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 2e-09
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +1
Query: 337 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 480
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +1
Query: 259 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 438
PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE
Sbjct: 14 PIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKE 73
Query: 439 VATAIRGAIIL 471
+ A+ IIL
Sbjct: 74 LLIAVCRTIIL 84
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 64.9 bits (151), Expect = 3e-09
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG
Sbjct: 33 LPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDD 91
Query: 436 EVATAIRGAIILAKLSVLTSPKKLRGNK--IGKPHNRPLQS 552
+V AI+ AI +AKL+++ + + G+PH L++
Sbjct: 92 QVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRPHTVALRT 132
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 64.5 bits (150), Expect = 4e-09
Identities = 33/76 (43%), Positives = 52/76 (68%)
Frame = -2
Query: 486 N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLKNLII 307
N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+
Sbjct: 121 NGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFIL 180
Query: 306 QGRAEEEINDLEFFDW 259
Q ++ +NDLEF DW
Sbjct: 181 QVW-QQLVNDLEFLDW 195
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 64.1 bits (149), Expect = 5e-09
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K
Sbjct: 39 LPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAK 97
Query: 436 EVATAIRGAIILAKLSVLTSPKKLRGNK--IGKPHNRPLQ 549
++ AI+ AI AK++++ + + G+PH+ P +
Sbjct: 98 QLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFK 137
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 62.9 bits (146), Expect = 1e-08
Identities = 36/80 (45%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = +1
Query: 262 IKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 429
IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 44 IKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGH 102
Query: 430 SKEVATAIRGAIILAKLSVL 489
KEV AIR AI AKL+++
Sbjct: 103 GKEVGIAIRKAINYAKLNII 122
Score = 34.7 bits (76), Expect = 3.5
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESIYLFFYQSK 268
EW P TKLG +V+EG+I + I+ YQ K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 62.5 bits (145), Expect = 2e-08
Identities = 44/96 (45%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +1
Query: 259 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 438
P +II+FFLG L DEVL+ M Q QRTR K F + + L V CSKE
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKE 99
Query: 439 VATAIRGAIILAKLSVLTSPKK-LRGNKIGKPHNRP 543
V TA + AI L LS L S + +GNKIG PH P
Sbjct: 100 VGTAAQRAITL--LSFLFSTQTGYKGNKIGNPHTIP 133
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +1
Query: 295 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 474
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 475 KLSVLTSP 498
K + +T P
Sbjct: 128 KKTAITVP 135
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 58.4 bits (135), Expect = 3e-07
Identities = 35/77 (45%), Positives = 46/77 (59%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 435
L I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK
Sbjct: 72 LRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSK 130
Query: 436 EVATAIRGAIILAKLSV 486
++ AI A A L+V
Sbjct: 131 QMRIAIEKATNAAYLNV 147
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 56.0 bits (129), Expect = 1e-06
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEF-----EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 384
KN Q +L +L +K ++++ G SL +V++ + V + T++G++ + K V
Sbjct: 75 KNFQINLKILDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAV 134
Query: 385 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPH 534
+GD +GH+GLGVK S + I+ A+ AKL++ + + GKP+
Sbjct: 135 LVGDLDGHVGLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPN 184
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.8 bits (126), Expect = 3e-06
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 417
+ IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 60 IKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 34.3 bits (75), Expect = 4.7
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 185 PVTKLGRLVREGKIDKLESIYLF 253
PVTKLGRLV++GK+ ++ I+ F
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEF 58
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 54.8 bits (126), Expect = 3e-06
Identities = 33/75 (44%), Positives = 45/75 (60%)
Frame = +1
Query: 262 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 441
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 442 ATAIRGAIILAKLSV 486
AI A A L+V
Sbjct: 114 RIAIEKANNQALLNV 128
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 54.4 bits (125), Expect = 4e-06
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = +1
Query: 265 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 444
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+ A
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTA 143
Query: 445 TAI 453
TAI
Sbjct: 144 TAI 146
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 54.0 bits (124), Expect = 5e-06
Identities = 25/65 (38%), Positives = 40/65 (61%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 483
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 484 VLTSP 498
+++ P
Sbjct: 72 LISVP 76
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 52.8 bits (121), Expect = 1e-05
Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 426
+ IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ LG+K
Sbjct: 67 MKIKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLGIK 125
Query: 427 CSKEVATAIRGAIILAKLSVLTSPKKLRGNKIGKPHNRP 543
S EV AIILAKLS++ G ++ +PH P
Sbjct: 126 YSMEV------AIILAKLSIIPVETATGGKRL-EPHMVP 157
Score = 48.0 bits (109), Expect = 4e-04
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2
Query: 170 QKEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSLISSSARP 304
+ +W+P+TKLG LV+E KI LE IY F S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/72 (33%), Positives = 43/72 (59%)
Frame = +1
Query: 283 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 462
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 463 IILAKLSVLTSP 498
++ AK SV+ P
Sbjct: 566 LVDAKKSVVRVP 577
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 51.6 bits (118), Expect = 3e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 298 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 477
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 478 LSVLTSP 498
++ P
Sbjct: 73 KQLVRIP 79
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 51.2 bits (117), Expect = 4e-05
Identities = 30/82 (36%), Positives = 44/82 (53%)
Frame = +1
Query: 289 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 468
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 469 LAKLSVLTSPKKLRGNKIGKPH 534
AK +++ P LRG + PH
Sbjct: 98 EAKKNLIRVP--LRGTTV--PH 115
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 50.4 bits (115), Expect = 7e-05
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +1
Query: 301 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 480
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 481 SVLTSPKKLRGN 516
+++ + +G+
Sbjct: 108 NLIKVKQTKKGS 119
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 50.0 bits (114), Expect = 9e-05
Identities = 23/63 (36%), Positives = 39/63 (61%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 490 TSP 498
T P
Sbjct: 79 TVP 81
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 161 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 253
K + KEW+PVTKLGRLV++ KI LE IYLF
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLF 84
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 490 TSP 498
P
Sbjct: 77 EVP 79
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 48.4 bits (110), Expect = 3e-04
Identities = 20/63 (31%), Positives = 39/63 (61%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 490 TSP 498
T P
Sbjct: 246 TVP 248
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.4 bits (110), Expect = 3e-04
Identities = 29/75 (38%), Positives = 41/75 (54%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 490 TSPKKLRGNKIGKPH 534
L+ N I PH
Sbjct: 71 KI--SLKNNTI--PH 81
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 48.0 bits (109), Expect = 4e-04
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 477
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAK 135
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 47.6 bits (108), Expect = 5e-04
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +1
Query: 337 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKLRGN 516
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ +
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSW 131
Query: 517 K--IGKPHNRPLQ 549
+ G PH+ P Q
Sbjct: 132 ECACGAPHSIPYQ 144
Score = 37.1 bits (82), Expect = 0.66
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 173 KEWVPVTKLGRLVREGKIDKLESI 244
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.6 bits (108), Expect = 5e-04
Identities = 19/63 (30%), Positives = 40/63 (63%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 490 TSP 498
P
Sbjct: 209 QVP 211
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +1
Query: 295 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 474
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 475 KLSVLTSPKKLRG 513
K + + P ++RG
Sbjct: 102 KKHMFSVP-RVRG 113
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 462
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 45.2 bits (102), Expect = 0.003
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK ++
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 490 TSPKKLRGNK 519
P LRG +
Sbjct: 84 FVP--LRGGR 91
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 490 TSPKKLRGNKIGK-PHNRPLQSXRAXV 567
P NKI PH S A V
Sbjct: 128 RVPL----NKINSIPHPMSGSSGAANV 150
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +1
Query: 295 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 474
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 475 KLSVLTSP 498
K +++ P
Sbjct: 116 KKTMIRVP 123
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 44.0 bits (99), Expect = 0.006
Identities = 27/74 (36%), Positives = 37/74 (50%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 490 TSPKKLRGNKIGKP 531
P L G I P
Sbjct: 104 RVP--LIGGTITHP 115
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 44.0 bits (99), Expect = 0.006
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 483
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 484 VLTSP 498
V+ P
Sbjct: 88 VIRVP 92
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.2 bits (97), Expect = 0.010
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 307 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 477
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAK 87
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.5 bits (93), Expect = 0.031
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 490 TSP 498
P
Sbjct: 79 EVP 81
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.041
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 477
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 40.3 bits (90), Expect = 0.071
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 483
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 484 VLTSPKKLRGNKIGKPH 534
++T + L G+ I PH
Sbjct: 73 LITI-ESLEGDSI--PH 86
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 38.7 bits (86), Expect = 0.22
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 400 NGHIGLGVKCSKEVATAIRGAIILAKLSVLTSPKKL--RGNKIGK--PHNRPLQ 549
GH GL CS EVATAI+ +L S L SP L GN GK P P+Q
Sbjct: 98 -GHSGLSSMCSGEVATAIQ---VLGITSYLGSPWPLCREGNMTGKSLPSVCPMQ 147
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 38.7 bits (86), Expect = 0.22
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 307 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 486
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 487 LTSP 498
+T P
Sbjct: 76 VTVP 79
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 38.7 bits (86), Expect = 0.22
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 179 WVPVTKLGRLVREGKIDKLESIYLF 253
W PVTKLGRLV++GK+ ++ I+ F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEF 59
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.50
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 456
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.5 bits (83), Expect = 0.50
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 490 TSP 498
P
Sbjct: 151 RVP 153
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.66
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -2
Query: 465 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 367
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.3 bits (80), Expect = 1.2
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAI 465
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAM 74
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 35.1 bits (77), Expect = 2.7
Identities = 21/68 (30%), Positives = 38/68 (55%)
Frame = +1
Query: 292 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 471
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 472 AKLSVLTS 495
AK+ L +
Sbjct: 150 AKIKALNN 157
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.1 bits (77), Expect = 2.7
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 316 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 489
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMI 77
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 3.5
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 289 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 453
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,758,357
Number of Sequences: 1657284
Number of extensions: 15866881
Number of successful extensions: 38183
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 35655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37924
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88998789286
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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