Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30155.Seq
(883 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 32 0.91
AY058638-1|AAL13867.1| 492|Drosophila melanogaster LD33732p pro... 31 2.8
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,... 31 2.8
AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,... 31 2.8
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,... 31 2.8
AY113409-1|AAM29414.1| 525|Drosophila melanogaster RE13562p pro... 29 6.4
AY060938-1|AAL28486.1| 277|Drosophila melanogaster GM08053p pro... 29 6.4
AE014298-1174|AAF46370.2| 525|Drosophila melanogaster CG12125-P... 29 6.4
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P... 29 6.4
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P... 29 6.4
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P... 29 6.4
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 32.3 bits (70), Expect = 0.91
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +1
Query: 223 NRPKSAKSLINKRIDRDRVECCSSLEQESTIKERGLQRQRAKNR 354
+RPK K ++KR RDR S Q S ++R +RQR+K R
Sbjct: 509 HRPKDEKQTLDKR--RDRSTDRSKENQRSNERQRSKERQRSKER 550
>AY058638-1|AAL13867.1| 492|Drosophila melanogaster LD33732p
protein.
Length = 492
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 223 NRPKSAKSLINKRIDRDRVECCSSLEQESTIKERGLQRQRAKNR 354
+RPK + ++KR RDR S Q S ++R +RQR+K R
Sbjct: 152 HRPKDEQQSVDKR--RDRSTDRSKENQRSNERQRSKERQRSKER 193
>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
isoform A protein.
Length = 1062
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 223 NRPKSAKSLINKRIDRDRVECCSSLEQESTIKERGLQRQRAKNR 354
+RPK + ++KR RDR S Q S ++R +RQR+K R
Sbjct: 509 HRPKDEQQSVDKR--RDRSTDRSKENQRSNERQRSKERQRSKER 550
>AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,
isoform D protein.
Length = 849
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 223 NRPKSAKSLINKRIDRDRVECCSSLEQESTIKERGLQRQRAKNR 354
+RPK + ++KR RDR S Q S ++R +RQR+K R
Sbjct: 509 HRPKDEQQSVDKR--RDRSTDRSKENQRSNERQRSKERQRSKER 550
>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
isoform C protein.
Length = 1107
Score = 30.7 bits (66), Expect = 2.8
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 223 NRPKSAKSLINKRIDRDRVECCSSLEQESTIKERGLQRQRAKNR 354
+RPK + ++KR RDR S Q S ++R +RQR+K R
Sbjct: 509 HRPKDEQQSVDKR--RDRSTDRSKENQRSNERQRSKERQRSKER 550
>AY113409-1|AAM29414.1| 525|Drosophila melanogaster RE13562p
protein.
Length = 525
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 554 RARKPPHPPRLMRRYRARQ 610
R RKPP PPR R+Y R+
Sbjct: 46 RRRKPPRPPRRARKYTGRR 64
>AY060938-1|AAL28486.1| 277|Drosophila melanogaster GM08053p
protein.
Length = 277
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 554 RARKPPHPPRLMRRYRARQ 610
R RKPP PPR R+Y R+
Sbjct: 46 RRRKPPRPPRRARKYTGRR 64
>AE014298-1174|AAF46370.2| 525|Drosophila melanogaster CG12125-PA
protein.
Length = 525
Score = 29.5 bits (63), Expect = 6.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2
Query: 554 RARKPPHPPRLMRRYRARQ 610
R RKPP PPR R+Y R+
Sbjct: 46 RRRKPPRPPRRARKYTGRR 64
>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
isoform B protein.
Length = 1257
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 23 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 136
TG A +L++ H PL GVI K P LP+S A
Sbjct: 26 TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63
>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
isoform C protein.
Length = 1294
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 23 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 136
TG A +L++ H PL GVI K P LP+S A
Sbjct: 63 TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100
>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
isoform D protein.
Length = 1272
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 23 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 136
TG A +L++ H PL GVI K P LP+S A
Sbjct: 41 TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,168,045
Number of Sequences: 53049
Number of extensions: 792244
Number of successful extensions: 1766
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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