Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30149.Seq
(867 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2732|AAN11752.1| 739|Drosophila melanogaster CG13035-P... 73 4e-13
AE014296-2731|AAF49466.1| 717|Drosophila melanogaster CG13035-P... 73 4e-13
AY060861-1|AAL28409.1| 441|Drosophila melanogaster GM03427p pro... 32 0.89
AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA... 30 4.7
AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p pro... 29 8.3
AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes ... 29 8.3
AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC... 29 8.3
AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB... 29 8.3
>AE014296-2732|AAN11752.1| 739|Drosophila melanogaster CG13035-PB,
isoform B protein.
Length = 739
Score = 73.3 bits (172), Expect = 4e-13
Identities = 43/148 (29%), Positives = 71/148 (47%)
Frame = +2
Query: 308 GPVWDIGQVLKAARLLCKPPQQVDFEDEQEMRFVYSVIYDVFRYKCVLDQAMDDIEFLAD 487
G W + + AA+LL KPP VDF++E EMR +S+IYDVFRYK V+ A+ D+ F +
Sbjct: 116 GARWTLPTIANAAKLLRKPPILVDFQNEHEMRLAFSLIYDVFRYKVVMSNALADVSFFEE 175
Query: 488 YPQYTGNVT*FGYS*WS*RDVAGRPDQGQSKNALHNYWKALDNHLRKWRTLSGKQRVHFX 667
+ + + + D + + K+ +K ++ + + L + R+
Sbjct: 176 HTELKNDEQRIWLMLFELYDRQFKGRNSEEKDLQARLYK--ESEVTELADLLWQHRIRLA 233
Query: 668 XXXXXXXXKNXALSLSDLLPPHCVRERI 751
+ AL LS LLP H E++
Sbjct: 234 ASISRMRIQVGALRLSQLLPIHLQNEKV 261
>AE014296-2731|AAF49466.1| 717|Drosophila melanogaster CG13035-PA,
isoform A protein.
Length = 717
Score = 73.3 bits (172), Expect = 4e-13
Identities = 43/148 (29%), Positives = 71/148 (47%)
Frame = +2
Query: 308 GPVWDIGQVLKAARLLCKPPQQVDFEDEQEMRFVYSVIYDVFRYKCVLDQAMDDIEFLAD 487
G W + + AA+LL KPP VDF++E EMR +S+IYDVFRYK V+ A+ D+ F +
Sbjct: 116 GARWTLPTIANAAKLLRKPPILVDFQNEHEMRLAFSLIYDVFRYKVVMSNALADVSFFEE 175
Query: 488 YPQYTGNVT*FGYS*WS*RDVAGRPDQGQSKNALHNYWKALDNHLRKWRTLSGKQRVHFX 667
+ + + + D + + K+ +K ++ + + L + R+
Sbjct: 176 HTELKNDEQRIWLMLFELYDRQFKGRNSEEKDLQARLYK--ESEVTELADLLWQHRIRLA 233
Query: 668 XXXXXXXXKNXALSLSDLLPPHCVRERI 751
+ AL LS LLP H E++
Sbjct: 234 ASISRMRIQVGALRLSQLLPIHLQNEKV 261
>AY060861-1|AAL28409.1| 441|Drosophila melanogaster GM03427p
protein.
Length = 441
Score = 32.3 bits (70), Expect = 0.89
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = -3
Query: 568 LVWPPSDVSLTPSGIAKLCDVAGVLWVVSQELNIVHGLVQ 449
++W PSDV+LT G AK ++A W+ + ++HGLV+
Sbjct: 360 VLWGPSDVALT--GSAKERELALQRWLDLERATVLHGLVR 397
>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
protein.
Length = 1784
Score = 29.9 bits (64), Expect = 4.7
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = -3
Query: 568 LVWPPSDVSLTPSGIAKLCDVAGVLWVVSQELNIVHGLVQ 449
++W PSDV+LT G AK ++ W+ + ++HGLV+
Sbjct: 1703 VLWGPSDVALT--GSAKERELDLQRWLDLERATVLHGLVR 1740
>AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p
protein.
Length = 660
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/79 (29%), Positives = 29/79 (36%)
Frame = +3
Query: 261 LRRILMHHHRFPLKLPAQFGTSDRS*KRLVFSASHHSKSISRTNKKCVSFILLFMTFSDI 440
L R HH +P + + + HH KS R VSFI MT D+
Sbjct: 41 LERPHSHHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKR-----VSFISCSMTCGDV 95
Query: 441 NVSWTRPWTILSSWLTTHS 497
N+ W P THS
Sbjct: 96 NI-WPHPTQKFLLSSQTHS 113
>AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes
protein.
Length = 660
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/79 (29%), Positives = 29/79 (36%)
Frame = +3
Query: 261 LRRILMHHHRFPLKLPAQFGTSDRS*KRLVFSASHHSKSISRTNKKCVSFILLFMTFSDI 440
L R HH +P + + + HH KS R VSFI MT D+
Sbjct: 41 LERPHSHHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKR-----VSFISCSMTCGDV 95
Query: 441 NVSWTRPWTILSSWLTTHS 497
N+ W P THS
Sbjct: 96 NI-WPHPTQKFLLSSQTHS 113
>AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC,
isoform C protein.
Length = 660
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/79 (29%), Positives = 29/79 (36%)
Frame = +3
Query: 261 LRRILMHHHRFPLKLPAQFGTSDRS*KRLVFSASHHSKSISRTNKKCVSFILLFMTFSDI 440
L R HH +P + + + HH KS R VSFI MT D+
Sbjct: 41 LERPHSHHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKR-----VSFISCSMTCGDV 95
Query: 441 NVSWTRPWTILSSWLTTHS 497
N+ W P THS
Sbjct: 96 NI-WPHPTQKFLLSSQTHS 113
>AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB,
isoform B protein.
Length = 673
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/79 (29%), Positives = 29/79 (36%)
Frame = +3
Query: 261 LRRILMHHHRFPLKLPAQFGTSDRS*KRLVFSASHHSKSISRTNKKCVSFILLFMTFSDI 440
L R HH +P + + + HH KS R VSFI MT D+
Sbjct: 54 LERPHSHHDASGFPIPVEKSWTYKCENDRCMRVGHHGKSAKR-----VSFISCSMTCGDV 108
Query: 441 NVSWTRPWTILSSWLTTHS 497
N+ W P THS
Sbjct: 109 NI-WPHPTQKFLLSSQTHS 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,173,632
Number of Sequences: 53049
Number of extensions: 770345
Number of successful extensions: 1783
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1781
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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