Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30147.Seq
(878 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 299 3e-83
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 299 3e-83
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 295 3e-82
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 285 3e-79
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 36 5e-04
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 2.1
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 3.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.9
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 8.6
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 299 bits (733), Expect = 3e-83
Identities = 143/195 (73%), Positives = 155/195 (79%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 16 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 75
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQLIVGVNKMDS + +++ +++GYNPAAVAFVP
Sbjct: 76 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 135
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RP P +
Sbjct: 136 ISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQD 195
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 196 VYKIGGIGTVPVGRV 210
Score = 27.5 bits (58), Expect = 0.17
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 213 WVLDKLKAERE 245
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 299 bits (733), Expect = 3e-83
Identities = 143/195 (73%), Positives = 155/195 (79%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ
Sbjct: 73 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQLIVGVNKMDS + +++ +++GYNPAAVAFVP
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVP 192
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RP P +
Sbjct: 193 ISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQD 252
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 253 VYKIGGIGTVPVGRV 267
Score = 145 bits (352), Expect = 4e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 42 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 222 DKLKAERE 245
DKLKAERE
Sbjct: 61 DKLKAERE 68
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 295 bits (724), Expect = 3e-82
Identities = 138/168 (82%), Positives = 147/168 (87%)
Frame = +1
Query: 259 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 438
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 439 REHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVPI 618
REHALLAFTLGVKQLIVGVNKMDS + +++ +++GYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 619 SGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARP 762
SGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALDAILPP RP
Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRP 168
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 285 bits (700), Expect = 3e-79
Identities = 136/195 (69%), Positives = 153/195 (78%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQ
Sbjct: 73 IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQLIVGVNKMD + + +++ +++GYN A+VAFVP
Sbjct: 133 TREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVP 192
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIEALDAILPP+RP P +
Sbjct: 193 ISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQD 252
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 253 VYKIGGIGTVPVGRV 267
Score = 145 bits (352), Expect = 4e-37
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +3
Query: 42 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 222 DKLKAERE 245
DKLKAERE
Sbjct: 61 DKLKAERE 68
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.9 bits (79), Expect = 5e-04
Identities = 27/73 (36%), Positives = 34/73 (46%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 477
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 478 QLIVGVNKMDSLN 516
+IV +NK+D N
Sbjct: 247 PIIVAINKIDKPN 259
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 54 KTHINIVVIGHVDSGKST 107
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 63 INIVVIGHVDSGKST 107
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.8 bits (49), Expect = 2.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -2
Query: 631 RAIQKWARKRQQLGCSPIFLMYEDTSFLISSNLGS 527
+A +KWA + C L +DT ++ +LGS
Sbjct: 652 QAFRKWAADTFAVACETFCLDDDDTLLEVALSLGS 686
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 55 FSLPIFG*SRITNCV*Y 5
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 384
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 384
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 878 DNNGTWFSTHQFQILPD 828
D N + S H+FQILP+
Sbjct: 294 DENLSQNSYHEFQILPE 310
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,164
Number of Sequences: 438
Number of extensions: 5336
Number of successful extensions: 32
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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