Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30147.Seq
(878 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 202 3e-52
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 202 3e-52
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 202 3e-52
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 202 3e-52
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 113 1e-25
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 108 4e-24
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 68 7e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 4e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 41 0.001
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 41 0.001
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 38 0.007
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.009
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.036
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.036
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 34 0.11
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.33
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.33
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.33
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.77
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 31 0.77
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.77
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 31 0.77
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 1.3
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 31 1.3
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 31 1.3
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 3.1
At1g12570.1 68414.m01459 glucose-methanol-choline (GMC) oxidored... 29 3.1
At5g35980.1 68418.m04333 protein kinase family protein contains ... 29 4.1
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 29 5.4
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 5.4
At5g04540.1 68418.m00454 expressed protein 28 7.2
At3g10550.1 68416.m01266 expressed protein 28 7.2
At2g43510.1 68415.m05406 trypsin inhibitor, putative similar to ... 28 7.2
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 7.2
At5g26570.1 68418.m03152 glycoside hydrolase starch-binding doma... 28 9.5
At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) / beta-fruc... 28 9.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 202 bits (492), Expect = 3e-52
Identities = 105/195 (53%), Positives = 127/195 (65%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQ+I NKMD+ + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISG+ GDNM+E ST + W+K G L+EALD I P RP P P +
Sbjct: 193 ISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 241 VYKIGGIGTVPVGRV 255
Score = 130 bits (313), Expect = 2e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 42 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 DKLKAERE 245
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 202 bits (492), Expect = 3e-52
Identities = 105/195 (53%), Positives = 127/195 (65%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQ+I NKMD+ + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISG+ GDNM+E ST + W+K G L+EALD I P RP P P +
Sbjct: 193 ISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 241 VYKIGGIGTVPVGRV 255
Score = 130 bits (313), Expect = 2e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 42 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 DKLKAERE 245
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 202 bits (492), Expect = 3e-52
Identities = 105/195 (53%), Positives = 127/195 (65%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQ+I NKMD+ + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISG+ GDNM+E ST + W+K G L+EALD I P RP P P +
Sbjct: 193 ISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 241 VYKIGGIGTVPVGRV 255
Score = 130 bits (313), Expect = 2e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 42 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 DKLKAERE 245
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 202 bits (492), Expect = 3e-52
Identities = 105/195 (53%), Positives = 127/195 (65%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
IDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQ
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
TREHALLAFTLGVKQ+I NKMD+ + ++ +++GYNP + FVP
Sbjct: 133 TREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVP 192
Query: 616 ISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFPARR 795
ISG+ GDNM+E ST + W+K G L+EALD I P RP P P +
Sbjct: 193 ISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQD 240
Query: 796 IXNSVVXVPCPSGRI 840
+ P GR+
Sbjct: 241 VYKIGGIGTVPVGRV 255
Score = 130 bits (313), Expect = 2e-30
Identities = 61/68 (89%), Positives = 62/68 (91%)
Frame = +3
Query: 42 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 221
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 222 DKLKAERE 245
DKLKAERE
Sbjct: 61 DKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 113 bits (273), Expect = 1e-25
Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 3/144 (2%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQ
Sbjct: 167 VEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 226
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAA-VAFV 612
TREH LA TLGV +LIV VNKMD + + +K + GYN V F+
Sbjct: 227 TREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFL 286
Query: 613 PISGWHGDNMLEPSTK--MPWFKG 678
PISG G NM + + PW+ G
Sbjct: 287 PISGLMGKNMDQRMGQEICPWWSG 310
Score = 68.1 bits (159), Expect = 7e-12
Identities = 28/64 (43%), Positives = 46/64 (71%)
Frame = +3
Query: 51 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 230
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 231 KAER 242
+ ER
Sbjct: 158 EEER 161
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 108 bits (260), Expect = 4e-24
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 2/177 (1%)
Frame = +1
Query: 262 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQT 438
+A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQT
Sbjct: 307 VAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQT 366
Query: 439 REHALLAFTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVPI 618
REHA + GV+Q+IV +NKMD + + DL K S R + +++ ++P+
Sbjct: 367 REHARVLRGFGVEQVIVAINKMDIVGYSKERFDLIKQHVGSFLQSCR--FKDSSLTWIPL 424
Query: 619 SGWHGDNML-EPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPLTSPCVFP 786
S N++ PS W G CL++A+D++ P R ++ P + P
Sbjct: 425 SAMENQNLVAAPSDNR--LSSWY--------QGPCLLDAVDSVKSPDRDVSKPLLMP 471
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +3
Query: 57 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 236
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 237 ERE 245
ERE
Sbjct: 298 ERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 68.1 bits (159), Expect = 7e-12
Identities = 34/87 (39%), Positives = 52/87 (59%)
Frame = +1
Query: 256 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 435
I+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G Q
Sbjct: 130 INTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------Q 182
Query: 436 TREHALLAFTLGVKQLIVGVNKMDSLN 516
T+EH LLA +GV ++V +NK D ++
Sbjct: 183 TKEHILLAKQVGVPDMVVFLNKEDQVD 209
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 39 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 173
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/78 (41%), Positives = 48/78 (61%)
Frame = +1
Query: 274 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 453
++ET+K + +D PGH D++KNMITG +Q D +L+V+ G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 454 LAFTLGVKQLIVGVNKMD 507
LA +GV L+ +NK+D
Sbjct: 177 LARQVGVPSLVCFLNKVD 194
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 48 KEKTHINIVVIGHVDSGKSTTT 113
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +1
Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 462
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 463 TLGVKQLIVGVNKMDSLN 516
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +1
Query: 283 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 462
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 463 TLGVKQLIVGVNKMDSLN 516
+ +K +I+ NK+D +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +1
Query: 277 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 444
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 445 HALLAFTLGVKQLIVGVNKMDSLNHH 522
H + +K +I+ NK+D + +
Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQEN 191
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 295 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 474
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 475 KQLIVGVNKMDSLNHH 522
K +I+ NK+D + +
Sbjct: 174 KDIIIIQNKIDLIQEN 189
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 235 LSVXRYQIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+S+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 235 LSVXRYQIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+S+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 190 ISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +1
Query: 280 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLA 459
E S Y + +ID PGH DF + S A+L+V A G QT + LA
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLA 183
Query: 460 FTLGVKQLIVGVNKMDSLNHHTVSPDLRKSRRK 558
F + ++ +NK+D T P+ K++ K
Sbjct: 184 FEANL-TIVPVINKID---QPTADPERVKAQLK 212
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 30 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 149
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 66 NIVVIGHVDSGKSTTTGHLIYKCGG 140
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.33
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 54 KTHINIVVIGHVDSGKSTTTGHLIYKCG 137
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 447
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 66 NIVVIGHVDSGKSTTTGHLIYKCGGI 143
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 483
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 484 IVGVNKMDSL 513
I+ +NK+D L
Sbjct: 757 IIALNKVDRL 766
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 447
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 66 NIVVIGHVDSGKSTTTGHLIYKCGGI 143
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 477
+ +ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610
Query: 478 QLIVGVNKMDSL 513
I+ +NK+D L
Sbjct: 611 -FIIALNKVDRL 621
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 277 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 402
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 7.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 66 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 164
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 483
+ID PGH F G+S D A+L+V + G+ QT E +L + +
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DITHGLQP--QTIE-SLNLLRMRNTEF 164
Query: 484 IVGVNKMDSL 513
I+ +NK+D L
Sbjct: 165 IIALNKVDRL 174
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 483
+ID PGH F G+S D A+L+V + G+ QT E +L + +
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIMHGLEP--QTIE-SLNLLRMRNTEF 823
Query: 484 IVGVNKMDSL 513
IV +NK+D L
Sbjct: 824 IVALNKVDRL 833
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 286 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 66 NIVVIGHVDSGKSTTTGHLIYKCG 137
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g12570.1 68414.m01459 glucose-methanol-choline (GMC)
oxidoreductase family protein similar to mandelonitrile
lyase from Prunus serotina [SP|P52706, SP|P52707];
contains Pfam profile PF00732 GMC oxidoreductase
Length = 572
Score = 29.5 bits (63), Expect = 3.1
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Frame = +1
Query: 268 LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 447
L ++ K ++ A HR + GT++ ++ TG+ K G E
Sbjct: 216 LLEYADPKGITVLLHATVHRILFRTR--GTTKPIANGVVYRDRTGQAHRAYLKEGALSEI 273
Query: 448 ALLAFTLGVKQLIV--GVNKMDSLNHHTVSPDLRKSRRKYPHTSRRLGYNPAAVAFVP 615
L A TLG QL++ GV L ++ + + PH + + NP FVP
Sbjct: 274 ILSAGTLGSPQLLMLSGVGPSAQLQAQNITVVMDQ-----PHVGQGMYDNPMNAVFVP 326
>At5g35980.1 68418.m04333 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 956
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +1
Query: 529 SPDLRKSRRKYPHTS--RRLGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 678
SPD R+ +YPH + LG +P+A F P+ + P+T + G
Sbjct: 587 SPDARRRVMQYPHGNGPNGLGTSPSAGNFAPLPLGTSPSQFTPNTNNQFLAG 638
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 694 KEGKADGKCLIEALDAILPPARPLTSP 774
KE +A G + +ALD +PP RP P
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 643 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 741
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At5g04540.1 68418.m00454 expressed protein
Length = 833
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 548 QEGSILIHQED-W-ATTQLLSLSCPFLD 625
+ S+L+H D W TTQL+SL+C LD
Sbjct: 432 ESASVLVHCSDGWDRTTQLVSLACLLLD 459
>At3g10550.1 68416.m01266 expressed protein
Length = 634
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +2
Query: 548 QEGSILIHQED-W-ATTQLLSLSCPFLD 625
+ S+L+H D W TTQL+SL+C LD
Sbjct: 229 ESASVLVHCSDGWDRTTQLVSLACLLLD 256
>At2g43510.1 68415.m05406 trypsin inhibitor, putative similar to
SP|P26780 Trypsin inhibitor 2 precursor (MTI-2) {Sinapis
alba}
Length = 89
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 804 IXYTSCREDAGACQGXGRWQDG 739
I YT CRE+ GA G RW G
Sbjct: 53 ICYTRCRENKGAKGGRCRWGQG 74
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 307 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 486
+D PGH F G D A+++VAA G QT E A+ ++
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAVPIV 608
Query: 487 VGVNKMD 507
+ +NK+D
Sbjct: 609 IAINKID 615
>At5g26570.1 68418.m03152 glycoside hydrolase starch-binding
domain-containing protein similar to SEX1 (starch
excess) [Arabidopsis thaliana] GI:12044358; contains
Pfam profile PF00686: Starch binding domain
Length = 1191
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 610 VPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL-IEALDAILPPARPLTS 771
V +SGW + L ++ ++ + KEG+ DGK + L A L AR LT+
Sbjct: 571 VGLSGWKQEECLAIGNELLAWRERDLLEKEGEEDGKTIWAMRLKATLDRARRLTA 625
>At1g62660.1 68414.m07071 beta-fructosidase (BFRUCT3) /
beta-fructofuranosidase / invertase, vacuolar identical
to beta-fructosidase GB:CAA67560 GI:1429209 [Arabidopsis
thaliana]; supported by full-length cDNA GI:14517549;
identical to cDNA Beta-fructosidase GI:3115854
Length = 648
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -3
Query: 537 IWAHCMVVQ*IHFVYSYDELFDTEGESEQGMLTG-LTVLRDTSFEFTGTGSYDE 379
+W H + IH++Y + + G+ TG T L D S TGS DE
Sbjct: 148 VWGHAVSKDLIHWLYLPIAMVPDQWYDANGVWTGSATFLDDGSIVMLYTGSTDE 201
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,583,342
Number of Sequences: 28952
Number of extensions: 421806
Number of successful extensions: 1253
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2067932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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