BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= psV30139.Seq (697 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 60 2e-09 AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 49 3e-06 AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 48 8e-06 Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr... 44 1e-04 Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr... 44 1e-04 Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr... 44 1e-04 Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr... 44 1e-04 AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 43 2e-04 Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 42 6e-04 Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 41 7e-04 Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 41 7e-04 Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 41 0.001 Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 41 0.001 Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 40 0.002 U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 36 0.037 U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 36 0.037 AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 36 0.037 U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical pr... 34 0.11 U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical pr... 34 0.11 Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical pr... 29 4.2 AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 29 4.2 Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 28 5.5 U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 28 5.5 Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 7.3 >Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical protein K09A9.4 protein. Length = 716 Score = 59.7 bits (138), Expect = 2e-09 Identities = 28/62 (45%), Positives = 37/62 (59%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFSA 491 SL+ CL FF L+ DN YSCS+C+ L + K + LP V+ + LKRFRH + S Sbjct: 403 SLESCLDRFFQNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVIIIQLKRFRHTMFGSC 462 Query: 492 KV 497 KV Sbjct: 463 KV 464 Score = 35.1 bits (77), Expect = 0.048 Identities = 17/38 (44%), Positives = 23/38 (60%) Frame = +1 Query: 64 RSIISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPI 177 ++ IS +F G L + +QC C S IE F DLS+PI Sbjct: 320 KTAISAIFQGVLENQIQCHSCGFRSRTIENFLDLSIPI 357 >AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical protein Y71A12B.9 protein. Length = 699 Score = 49.2 bits (112), Expect = 3e-06 Identities = 23/54 (42%), Positives = 31/54 (57%) Frame = +3 Query: 309 VSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFR 470 V L DCL+ FF + L+ C++CK + K I LP VLC+H+KRFR Sbjct: 550 VRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRKLPQVLCLHMKRFR 603 Score = 39.5 bits (88), Expect = 0.002 Identities = 19/45 (42%), Positives = 27/45 (60%) Frame = +1 Query: 73 ISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPIPSREHLAVLR 207 IS F G L S+V C C S +I+ F DLSL IP++ + + +R Sbjct: 507 ISKYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDIPAQRNASKVR 551 >AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical protein Y59A8B.2 protein. Length = 357 Score = 47.6 bits (108), Expect = 8e-06 Identities = 21/52 (40%), Positives = 32/52 (61%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 SL CL + FS +L GD+ ++C +CK+ R + S + P V+ +HLKRF Sbjct: 210 SLDMCLRSHFSQTKLDGDSRWNCPKCKEPRASTRTSKLWQPPPVMIIHLKRF 261 >Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein T24B8.7b protein. Length = 2923 Score = 44.0 bits (99), Expect = 1e-04 Identities = 16/57 (28%), Positives = 34/57 (59%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELL 482 +L++ L F +A ++G+N Y C +C + + + + + LP + + LKRF ++L+ Sbjct: 1921 NLEEALENFLAAHVMEGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTYDLV 1977 >Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein T24B8.7a protein. Length = 2920 Score = 44.0 bits (99), Expect = 1e-04 Identities = 16/57 (28%), Positives = 34/57 (59%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELL 482 +L++ L F +A ++G+N Y C +C + + + + + LP + + LKRF ++L+ Sbjct: 1918 NLEEALENFLAAHVMEGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTYDLV 1974 >Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein T24B8.7b protein. Length = 2923 Score = 44.0 bits (99), Expect = 1e-04 Identities = 16/57 (28%), Positives = 34/57 (59%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELL 482 +L++ L F +A ++G+N Y C +C + + + + + LP + + LKRF ++L+ Sbjct: 1921 NLEEALENFLAAHVMEGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTYDLV 1977 >Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein T24B8.7a protein. Length = 2920 Score = 44.0 bits (99), Expect = 1e-04 Identities = 16/57 (28%), Positives = 34/57 (59%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELL 482 +L++ L F +A ++G+N Y C +C + + + + + LP + + LKRF ++L+ Sbjct: 1918 NLEEALENFLAAHVMEGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTYDLV 1974 >AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical protein H34C03.2 protein. Length = 900 Score = 42.7 bits (96), Expect = 2e-04 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Frame = +3 Query: 309 VSLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFS 488 V LQ+ L F + ++L + + C +CKK K + LP +L +HLKRF++ Sbjct: 698 VLLQETLDWFTTKEQLGEQDSWYCPQCKKHERATKQLALWKLPEILILHLKRFQYTKWSR 757 Query: 489 AKVXXXXXXXXTIWT*RLTRTKSAPRXVSR-YSLXAVISHMGTVGGG 626 K+ + LT + P Y L AV H G++ GG Sbjct: 758 EKL--TWEVVIPVRGLDLTDKVANPNHEKAIYDLIAVSRHYGSLSGG 802 Score = 41.9 bits (94), Expect = 4e-04 Identities = 17/43 (39%), Positives = 28/43 (65%) Frame = +1 Query: 67 SIISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195 SII D G+L S + C +C+++S + + F LSLP+P +E + Sbjct: 419 SIIVDTLHGQLKSTLICPVCEKISIKFDPFGYLSLPLPPKEQI 461 >Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical protein T05H10.1 protein. Length = 1326 Score = 41.5 bits (93), Expect = 6e-04 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 S+++ L AF + L G N Y C CK ++ K I P +L + LKRF Sbjct: 249 SVEEALTAFVQPELLDGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRF 300 Score = 31.5 bits (68), Expect = 0.60 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = +1 Query: 58 KYRSIISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPI 177 ++ +I D++ G + V CL C R S + + F DL L + Sbjct: 199 EHEKLIQDLYRGTMEDFVACLKCGRESVKTDYFLDLPLAV 238 >Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical protein R10E11.3b protein. Length = 414 Score = 41.1 bits (92), Expect = 7e-04 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFR 470 S+ CL F + L GD Y C C + K I P +L +HLKRF+ Sbjct: 224 SISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFK 276 Score = 34.3 bits (75), Expect = 0.084 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +1 Query: 73 ISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPI 177 I ++F G L + +CL C+ VS++ E F DLS+ + Sbjct: 185 IHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDV 219 >Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical protein R10E11.3a protein. Length = 426 Score = 41.1 bits (92), Expect = 7e-04 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFR 470 S+ CL F + L GD Y C C + K I P +L +HLKRF+ Sbjct: 236 SISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFK 288 Score = 34.3 bits (75), Expect = 0.084 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = +1 Query: 73 ISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPI 177 I ++F G L + +CL C+ VS++ E F DLS+ + Sbjct: 197 IHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDV 231 >Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical protein F30A10.10 protein. Length = 1262 Score = 40.7 bits (91), Expect = 0.001 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFSA 491 +L D L A+F + L + CS+C K + K S V LP V+ + L R+++ Sbjct: 262 TLLDALDAYFGEEHLDD---FKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSKGRQ 318 Query: 492 KVXXXXXXXXTIWT*RLTRT-KSAPRXVSRYSLXAVISHMG 611 K+ I RT S P Y L AV H G Sbjct: 319 KLKTPMAYPREIPAKAFQRTNNSIPPPAEMYDLFAVTIHEG 359 >Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical protein F30A10.10 protein. Length = 1262 Score = 40.7 bits (91), Expect = 0.001 Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 1/101 (0%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRFRHELLFSA 491 +L D L A+F + L + CS+C K + K S V LP V+ + L R+++ Sbjct: 262 TLLDALDAYFGEEHLDD---FKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTSKGRQ 318 Query: 492 KVXXXXXXXXTIWT*RLTRT-KSAPRXVSRYSLXAVISHMG 611 K+ I RT S P Y L AV H G Sbjct: 319 KLKTPMAYPREIPAKAFQRTNNSIPPPAEMYDLFAVTIHEG 359 >Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical protein F07A11.4 protein. Length = 1095 Score = 39.5 bits (88), Expect = 0.002 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = +1 Query: 67 SIISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPIPSRE 189 SI D+F G+L S VQC CDRVS + F L +P P + Sbjct: 566 SIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFPKNK 606 Score = 34.3 bits (75), Expect = 0.084 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +3 Query: 315 LQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 L L F + LK + + CS CK+ K + LP VL + LKRF Sbjct: 910 LTQMLDLFSETERLKPEESWYCSTCKENVEATKKLQLYRLPPVLIIQLKRF 960 >U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect protein 3, isoforma protein. Length = 1175 Score = 35.5 bits (78), Expect = 0.037 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 SL+ C+ F + L D C RC+K K+ I LP L +HLKRF Sbjct: 1029 SLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRF 1078 >U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect protein 3, isoformb protein. Length = 1178 Score = 35.5 bits (78), Expect = 0.037 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 SL+ C+ F + L D C RC+K K+ I LP L +HLKRF Sbjct: 1032 SLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRF 1081 >AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-terminal hydrolase protein. Length = 1175 Score = 35.5 bits (78), Expect = 0.037 Identities = 20/52 (38%), Positives = 26/52 (50%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 SL+ C+ F + L D C RC+K K+ I LP L +HLKRF Sbjct: 1029 SLEHCIEKFSCPETL--DAAIQCDRCEKKTMRDKVMTIWKLPKYLIIHLKRF 1078 >U64844-5|AAM45362.1| 368|Caenorhabditis elegans Hypothetical protein T22F3.2b protein. Length = 368 Score = 33.9 bits (74), Expect = 0.11 Identities = 15/52 (28%), Positives = 30/52 (57%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 S+++ + A F+ ++ G Y+CS+CKK + ++ P +L +H+ RF Sbjct: 223 SIKELMQALFTESKIFG---YNCSKCKKKSDAPVKPTLLRAPQILLMHISRF 271 >U64844-4|AAB18307.1| 376|Caenorhabditis elegans Hypothetical protein T22F3.2a protein. Length = 376 Score = 33.9 bits (74), Expect = 0.11 Identities = 15/52 (28%), Positives = 30/52 (57%) Frame = +3 Query: 312 SLQDCLAAFFSADELKGDNMYSCSRCKKLRNGVKLSGIVVLPXVLCVHLKRF 467 S+++ + A F+ ++ G Y+CS+CKK + ++ P +L +H+ RF Sbjct: 223 SIKELMQALFTESKIFG---YNCSKCKKKSDAPVKPTLLRAPQILLMHISRF 271 >Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical protein H19N07.2c protein. Length = 1135 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 73 ISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195 I ++F G + S ++CL D S+R E+F D+ L + + L Sbjct: 299 IPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSL 339 >Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical protein H19N07.2b protein. Length = 1130 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 73 ISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195 I ++F G + S ++CL D S+R E+F D+ L + + L Sbjct: 299 IPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSL 339 >Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical protein H19N07.2a protein. Length = 1133 Score = 30.7 bits (66), Expect = 1.0 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +1 Query: 73 ISDVFXGKLLSAVQCLICDRVSTRIETFQDLSLPIPSREHL 195 I ++F G + S ++CL D S+R E+F D+ L + + L Sbjct: 299 IPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSL 339 >Z81507-2|CAB04135.1| 388|Caenorhabditis elegans Hypothetical protein F18A11.2 protein. Length = 388 Score = 28.7 bits (61), Expect = 4.2 Identities = 13/47 (27%), Positives = 21/47 (44%) Frame = -3 Query: 221 MGCWQRSTAKCSRDGIGSDKSWNVSILVDTLSHIRH*TADSNFPSNT 81 M W+ T C R + SW ++ +D IR+ +S + S T Sbjct: 317 MDLWREMTVGCERPALSQIDSWKYTVPIDGFYFIRYGNHNSWYFSTT 363 >AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical protein W05F2.7 protein. Length = 1424 Score = 28.7 bits (61), Expect = 4.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = +1 Query: 325 VWPPSSAPTNSKATTCTAAPAA 390 +WP S AP S+ T T APAA Sbjct: 378 IWPASYAPNASRIVTGTMAPAA 399 >Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical protein C40H5.5 protein. Length = 409 Score = 28.3 bits (60), Expect = 5.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 IPRLVAADPVPGTLGRAALPAAHAEPPR 236 +P +VA P P T A PAA +PPR Sbjct: 243 VPAVVAPPPPPPTTTTAPPPAAPEQPPR 270 >U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transcription factor TTX-3 protein. Length = 409 Score = 28.3 bits (60), Expect = 5.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 153 IPRLVAADPVPGTLGRAALPAAHAEPPR 236 +P +VA P P T A PAA +PPR Sbjct: 243 VPAVVAPPPPPPTTTTAPPPAAPEQPPR 270 >Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical protein ZK593.5 protein. Length = 1326 Score = 27.9 bits (59), Expect = 7.3 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = +1 Query: 94 KLLSAVQCLICDRVSTRIETFQDLSLPIPSREHLAVLRCQQPMLNHHA 237 K SAV LI ++ +T QDL L + H LR ++ +NH A Sbjct: 1198 KRFSAVPGLISGPITLESQTRQDLLLKLIDNLHDESLRLRREEVNHQA 1245 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,875,699 Number of Sequences: 27780 Number of extensions: 241480 Number of successful extensions: 745 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 744 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1602927856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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