Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30137.Seq
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D84273-1|BAA34600.1| 548|Homo sapiens Asparaginyl tRNA Syntheta... 143 6e-34
BC001687-1|AAH01687.1| 548|Homo sapiens asparaginyl-tRNA synthe... 143 6e-34
AK222835-1|BAD96555.1| 548|Homo sapiens asparaginyl-tRNA synthe... 143 6e-34
AJ000334-1|CAA04008.1| 548|Homo sapiens asparaginyl-tRNA synthe... 143 6e-34
AF269088-1|AAK27326.1| 1011|Homo sapiens breast cancer antigen N... 34 0.59
BC015031-1|AAH15031.1| 847|Homo sapiens matrin 3 protein. 32 3.1
AY007157-1|AAG02007.1| 407|Homo sapiens protein ( Homo sapiens ... 32 3.1
AF117236-1|AAF17217.1| 848|Homo sapiens matrin 3 protein. 32 3.1
AB018266-1|BAA34443.2| 853|Homo sapiens KIAA0723 protein protein. 32 3.1
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 30 9.6
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 30 9.6
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 30 9.6
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 30 9.6
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 30 9.6
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 30 9.6
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 30 9.6
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 30 9.6
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 30 9.6
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 30 9.6
U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein. 30 9.6
L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein ... 30 9.6
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 30 9.6
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 30 9.6
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 30 9.6
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 30 9.6
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 30 9.6
AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulat... 30 9.6
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 30 9.6
>D84273-1|BAA34600.1| 548|Homo sapiens Asparaginyl tRNA Synthetase
protein.
Length = 548
Score = 143 bits (347), Expect = 6e-34
Identities = 66/109 (60%), Positives = 81/109 (74%)
Frame = +1
Query: 511 WVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYNALVLSTESSVVLYGKLEAVPEGK 690
WVHRLRRQGK+L FL LRDGTGYLQCVL LCQ YN ++LSTESSV +YG L P+GK
Sbjct: 133 WVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKGK 192
Query: 691 KAPGGHELTADYWGIDWTRTTRWCDAILNEEALPDVQLDHRXIMIRXEN 837
+APGGHEL+ D+W + D ++NEE+ DVQL++R +MIR EN
Sbjct: 193 QAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGEN 241
Score = 77.4 bits (182), Expect = 6e-14
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +2
Query: 257 SKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDP 436
S+ + + ++V +KSQLK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DP
Sbjct: 48 SQKENERWNVISKSQLKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDP 107
Query: 437 SLPKATVVKICETTEHRGQRI 499
SLP+ VKI +RGQR+
Sbjct: 108 SLPEPKCVKIGALEGYRGQRV 128
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3
Query: 123 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYV 254
L+E+Y S EKPFKT LKA+ GKEPFPTIYV
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYV 46
>BC001687-1|AAH01687.1| 548|Homo sapiens asparaginyl-tRNA
synthetase protein.
Length = 548
Score = 143 bits (347), Expect = 6e-34
Identities = 66/109 (60%), Positives = 81/109 (74%)
Frame = +1
Query: 511 WVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYNALVLSTESSVVLYGKLEAVPEGK 690
WVHRLRRQGK+L FL LRDGTGYLQCVL LCQ YN ++LSTESSV +YG L P+GK
Sbjct: 133 WVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKGK 192
Query: 691 KAPGGHELTADYWGIDWTRTTRWCDAILNEEALPDVQLDHRXIMIRXEN 837
+APGGHEL+ D+W + D ++NEE+ DVQL++R +MIR EN
Sbjct: 193 QAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGEN 241
Score = 77.4 bits (182), Expect = 6e-14
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +2
Query: 257 SKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDP 436
S+ + + ++V +KSQLK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DP
Sbjct: 48 SQKENERWNVISKSQLKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDP 107
Query: 437 SLPKATVVKICETTEHRGQRI 499
SLP+ VKI +RGQR+
Sbjct: 108 SLPEPKCVKIGALEGYRGQRV 128
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3
Query: 123 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYV 254
L+E+Y S EKPFKT LKA+ GKEPFPTIYV
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYV 46
>AK222835-1|BAD96555.1| 548|Homo sapiens asparaginyl-tRNA
synthetase variant protein.
Length = 548
Score = 143 bits (347), Expect = 6e-34
Identities = 66/109 (60%), Positives = 81/109 (74%)
Frame = +1
Query: 511 WVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYNALVLSTESSVVLYGKLEAVPEGK 690
WVHRLRRQGK+L FL LRDGTGYLQCVL LCQ YN ++LSTESSV +YG L P+GK
Sbjct: 133 WVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKGK 192
Query: 691 KAPGGHELTADYWGIDWTRTTRWCDAILNEEALPDVQLDHRXIMIRXEN 837
+APGGHEL+ D+W + D ++NEE+ DVQL++R +MIR EN
Sbjct: 193 QAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGEN 241
Score = 77.4 bits (182), Expect = 6e-14
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +2
Query: 257 SKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDP 436
S+ + + ++V +KSQLK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DP
Sbjct: 48 SQKENERWNVISKSQLKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDP 107
Query: 437 SLPKATVVKICETTEHRGQRI 499
SLP+ VKI +RGQR+
Sbjct: 108 SLPEPKCVKIGALEGYRGQRV 128
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3
Query: 123 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYV 254
L+E+Y S EKPFKT LKA+ GKEPFPTIYV
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYV 46
>AJ000334-1|CAA04008.1| 548|Homo sapiens asparaginyl-tRNA
synthetase protein.
Length = 548
Score = 143 bits (347), Expect = 6e-34
Identities = 66/109 (60%), Positives = 81/109 (74%)
Frame = +1
Query: 511 WVHRLRRQGKSLAFLTLRDGTGYLQCVLHGLLCQTYNALVLSTESSVVLYGKLEAVPEGK 690
WVHRLRRQGK+L FL LRDGTGYLQCVL LCQ YN ++LSTESSV +YG L P+GK
Sbjct: 133 WVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKGK 192
Query: 691 KAPGGHELTADYWGIDWTRTTRWCDAILNEEALPDVQLDHRXIMIRXEN 837
+APGGHEL+ D+W + D ++NEE+ DVQL++R +MIR EN
Sbjct: 193 QAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGEN 241
Score = 77.4 bits (182), Expect = 6e-14
Identities = 36/81 (44%), Positives = 56/81 (69%)
Frame = +2
Query: 257 SKDDTKDYDVAAKSQLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDP 436
S+ + + ++V +KSQLK I+K+W RE K+ + K E E++ +R +NL+EAKKI ++ DP
Sbjct: 48 SQKENERWNVISKSQLKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDP 107
Query: 437 SLPKATVVKICETTEHRGQRI 499
SLP+ VKI +RGQR+
Sbjct: 108 SLPEPKCVKIGALEGYRGQRV 128
Score = 46.8 bits (106), Expect = 1e-04
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +3
Query: 123 LSEIYTSXXXXXXXXXXXXXEKPFKTILKAMHHAGKEPFPTIYV 254
L+E+Y S EKPFKT LKA+ GKEPFPTIYV
Sbjct: 3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYV 46
>AF269088-1|AAK27326.1| 1011|Homo sapiens breast cancer antigen
NY-BR-1.1 protein.
Length = 1011
Score = 34.3 bits (75), Expect = 0.59
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 329 RENYKA--MDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETTEHRGQRIC 502
RE +KA M +++++++ E+ S + + + LLQ D LPKAT K +T + +
Sbjct: 552 RETFKAAQMFPSESKQKDDEENSWDFESFLETLLQNDVCLPKATHQKEFDTLSGKLEESP 611
Query: 503 IRDGYI--VSGAKVNL 544
+DG + G K++L
Sbjct: 612 DKDGLLKPTCGMKISL 627
Score = 31.1 bits (67), Expect = 5.5
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQEDPSLPKATVVKICETT 478
+LK Q + + + + K K +EEN S + + + + Q+D LPKAT K +T
Sbjct: 395 ELKNEQTLRAAQMFPSESKQKDDEEN----SWDSESPCETVSQKDVYLPKATHQKEFDTL 450
Query: 479 EHRGQRICIRDGYI--VSGAKVNL 544
+ + ++DG + G KV+L
Sbjct: 451 SGKLEESPVKDGLLKPTCGRKVSL 474
>BC015031-1|AAH15031.1| 847|Homo sapiens matrin 3 protein.
Length = 847
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 287 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 415
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 709 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 756
>AY007157-1|AAG02007.1| 407|Homo sapiens protein ( Homo sapiens
clone CDABP0107 mRNA sequence. ).
Length = 407
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 287 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 415
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 269 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 316
>AF117236-1|AAF17217.1| 848|Homo sapiens matrin 3 protein.
Length = 848
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 287 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 415
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 710 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 757
>AB018266-1|BAA34443.2| 853|Homo sapiens KIAA0723 protein protein.
Length = 853
Score = 31.9 bits (69), Expect = 3.1
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +2
Query: 287 AAKSQLKKIQKIWV--RENYKAMDKAKAEEENTE---KRSQNLDEAKK 415
AAK +LKK+ KI +EN A++ EENTE + S+N D+ K
Sbjct: 715 AAKKKLKKVDKIEELDQENEAALENGIKNEENTEPGAESSENADDPNK 762
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1304 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1348
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2454
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1217 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1261
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2288
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1217 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1261
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2337
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1266 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1310
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent ATPase
and helicase protein.
Length = 2375
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1304 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1348
>U09820-1|AAC50069.1| 1641|Homo sapiens helicase II protein.
Length = 1641
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 562 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 606
>L34363-1|AAA20872.1| 1298|Homo sapiens X-linked nuclear protein
protein.
Length = 1298
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 301 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 345
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1383 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
>AB209545-1|BAD92782.1| 1224|Homo sapiens transcriptional regulator
ATRX isoform 1 variant protein.
Length = 1224
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 718 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 762
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 299 QLKKIQKIWVRENYKAMDKAKAEEENTEKRSQNLDEAKKILLQED 433
Q KK ++I V+E+ + +K+ +EEE EK + +E ++ +ED
Sbjct: 1421 QKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,262,497
Number of Sequences: 237096
Number of extensions: 2893353
Number of successful extensions: 7065
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 6524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7061
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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