Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30132.Seq
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 33 0.19
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 33 0.19
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 33 0.25
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 33 0.25
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 33 0.25
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 33 0.25
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 33 0.25
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 31 0.59
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 30 1.4
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 30 1.4
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 30 1.8
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 30 1.8
U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related... 29 4.1
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 28 5.5
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 5.5
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 5.5
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 5.5
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 28 5.5
U39471-2|AAA80131.1| 92|Caenorhabditis elegans Hypothetical pr... 28 5.5
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 28 5.5
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 5.5
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 5.5
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 7.2
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 7.2
U58751-9|AAB00660.1| 133|Caenorhabditis elegans Hypothetical pr... 28 7.2
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 7.2
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 9.6
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 9.6
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 9.6
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 9.6
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like tra... 27 9.6
AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-lik... 27 9.6
AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical ... 27 9.6
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 367 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 501
S A N + ++CS C + I + +++ + +HS C +C C
Sbjct: 34 SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTC 78
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 367 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 501
S A N + ++CS C + I + +++ + +HS C +C C
Sbjct: 34 SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTC 78
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 319 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 498
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 100 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 157
Query: 499 CHTVHRPTSTSAM 537
+ + T A+
Sbjct: 158 RKCISKGMLTEAV 170
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 319 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 498
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 100 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 157
Query: 499 CHTVHRPTSTSAM 537
+ + T A+
Sbjct: 158 RKCISKGMLTEAV 170
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 319 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 498
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 102 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 159
Query: 499 CHTVHRPTSTSAM 537
+ + T A+
Sbjct: 160 RKCISKGMLTEAV 172
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 319 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 498
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 101 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 158
Query: 499 CHTVHRPTSTSAM 537
+ + T A+
Sbjct: 159 RKCISKGMLTEAV 171
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/73 (30%), Positives = 37/73 (50%)
Frame = +1
Query: 319 CGKFGNGQEGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYF 498
C G+ G + GA++ E +G KRSV ++ + +++N EIDKQ + C C F
Sbjct: 101 CSVCGDKSTGLHYGAAT-CEGCKGFFKRSVQNKKVYHCSQDNCCEIDKQN-RNRCQSCRF 158
Query: 499 CHTVHRPTSTSAM 537
+ + T A+
Sbjct: 159 RKCISKGMLTEAV 171
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 391 NTKRSVCSRCLQMINENNKIEI--DKQAFHSHCAKCYFCHT 507
N+K+ C+RC + + +K+ D FH C KCY C T
Sbjct: 2 NSKQH-CNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGT 41
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 391 NTKRSVCSRCLQMINENNKIEI--DKQAFHSHCAKCYFCHT 507
N+K+ C+RC + + +K+ D FH C KCY C T
Sbjct: 2 NSKQH-CNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGT 41
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 409 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHT 507
C+ C + I + +D +++H +C KC C +
Sbjct: 29 CNCCNEQIYDRYIYRMDNRSYHENCVKCTICES 61
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 409 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHT 507
C+ C + I + +D +++H +C KC C +
Sbjct: 29 CNCCNEQIYDRYIYRMDNRSYHENCVKCTICES 61
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 400 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCH 504
R VC +C MI++ I+ +FH + KC C+
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCN 177
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 400 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCH 504
R VC +C MI++ I+ +FH + KC C+
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCN 177
>U53149-4|AAA96120.1| 956|Caenorhabditis elegans Patched related
family protein 1 protein.
Length = 956
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 481 CAKCYFCHTVHRPTSTSAMVKSSASLASNITSCTDIRTTPM 603
CA+ + + H P S A++A +ITS TDI T M
Sbjct: 376 CAEWHRTNPQHSPEKRIGKTLSEAAVAISITSLTDIATFAM 416
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 463 CHKHCLYGFETNSAGCSLCKCR 484
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 463 CHKHCLYGFETNSAGCSLCKCR 484
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/43 (23%), Positives = 20/43 (46%)
Frame = +1
Query: 373 SEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 501
S + T+ +CS C +I + + + ++H C +C C
Sbjct: 7 SATTSSTTEDKLCSGCGCLIKDRYIYRVMEDSYHESCLRCSCC 49
>U39471-2|AAA80131.1| 92|Caenorhabditis elegans Hypothetical
protein T16D1.1 protein.
Length = 92
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 196 NSVGGEDVLRARILQWMLQAHVLDRFRGEC 285
++VG E+++ R QW L H+L F+ C
Sbjct: 23 SNVGSEEIIEER-KQWTLDGHLLGHFQRRC 51
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = -2
Query: 628 CSKHCL----KNSLGLSLCRCK 575
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 564 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 647
QH H +H D PN F + QF++P +
Sbjct: 264 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 292
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 564 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 647
QH H +H D PN F + QF++P +
Sbjct: 277 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 305
>U58751-9|AAB00660.1| 133|Caenorhabditis elegans Hypothetical
protein C07G1.6 protein.
Length = 133
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 430 INENNKIEIDKQAFHSHCAKCYFCHTVHRPTSTSAMVKSSASLASNITS 576
+N N + H AK F HT H P A S+++ AS TS
Sbjct: 23 VNMNVVVNFFTGLDHYEYAKLRFAHTAHTPPLIRASSTSASASASTSTS 71
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 564 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 647
QH H +H D PN F + QF++P +
Sbjct: 265 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 293
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 556 GQKFCESCFEQHIAPR 571
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 1296 GQKFCESCFEQHIAPR 1311
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 643 GQKFCESCFEQHIAPR 658
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 517 GQKFCESCFEQHIAPR 532
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 556 GQKFCESCFEQHIAPR 571
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 1296 GQKFCESCFEQHIAPR 1311
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 643 GQKFCESCFEQHIAPR 658
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.5 bits (58), Expect = 9.6
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 537 GQVFCEPCFQHHVLHR 584
GQ FCE CF+ H+ R
Sbjct: 517 GQKFCESCFEQHIAPR 532
>AF353303-1|AAK32717.1| 367|Caenorhabditis elegans GATA-like
transcription factorELT-6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 361 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVHRP 519
A S + + N+ S CS C + + +++ + + C Y H HRP
Sbjct: 249 AGSSEDDTSANSSISKCSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTHRP 301
>AF100657-1|AAC68957.3| 367|Caenorhabditis elegans Erythroid-like
transcription factorfamily protein 6 protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 361 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVHRP 519
A S + + N+ S CS C + + +++ + + C Y H HRP
Sbjct: 249 AGSSEDDTSANSSISKCSNCSTIKTTAWRRDLEGKLVCNACGLYYRLHRTHRP 301
>AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical
protein Y41D4B.16 protein.
Length = 453
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 493 YFCHTVHRPTSTSAMVKSSASLASNITSCTDIRTTP 600
YF PT+TSA + S+AS S ++ T T P
Sbjct: 357 YFNMDTGAPTTTSAALSSTASTPSIASTATSAATNP 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,637,017
Number of Sequences: 27780
Number of extensions: 358329
Number of successful extensions: 1078
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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