Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30125.Seq
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ496105-1|ABF47094.1| 223|Homo sapiens progesterone receptor m... 115 1e-25
BC092478-1|AAH92478.1| 223|Homo sapiens progesterone receptor m... 115 1e-25
BC016692-1|AAH16692.1| 223|Homo sapiens progesterone receptor m... 115 1e-25
AJ002030-1|CAA05152.1| 223|Homo sapiens progresterone binding p... 115 1e-25
Y12711-1|CAA73248.1| 195|Homo sapiens putative progesterone bin... 105 1e-22
DQ496104-1|ABF47093.1| 195|Homo sapiens progesterone receptor m... 105 1e-22
CR456993-1|CAG33274.1| 195|Homo sapiens PGRMC1 protein. 105 1e-22
BC034238-1|AAH34238.1| 195|Homo sapiens progesterone receptor m... 105 1e-22
BC008823-1|AAH08823.1| 172|Homo sapiens neuron derived neurotro... 66 1e-10
AY762102-1|AAX07829.1| 172|Homo sapiens cell growth-inhibiting ... 66 1e-10
AF173937-1|AAD51419.1| 172|Homo sapiens secreted protein of unk... 66 1e-10
AB126219-1|BAD72063.1| 172|Homo sapiens neudesin protein protein. 66 1e-10
AK223135-1|BAD96855.1| 172|Homo sapiens SCIRP10-related protein... 64 3e-10
BC051697-1|AAH51697.1| 264|Homo sapiens cytochrome b5 domain co... 56 1e-07
BC020263-1|AAH20263.1| 264|Homo sapiens cytochrome b5 domain co... 56 1e-07
AK172844-1|BAD18808.1| 264|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AJ249131-1|CAB65109.1| 109|Homo sapiens progesterone membrane b... 53 1e-06
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 32 2.2
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 32 2.2
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 32 2.2
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 32 2.2
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 32 2.2
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 32 2.2
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 31 3.8
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 31 3.8
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 31 3.8
>DQ496105-1|ABF47094.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 115 bits (277), Expect = 1e-25
Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV--TAP 440
+LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+RGLATF + A
Sbjct: 107 QLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDAL 165
Query: 441 EKDYDDLSDLNSMEMESVREWEDNLERIMIWSVDF*GLVKNPG 569
+YDDLSDLN+++MESVREWE + D+ G + PG
Sbjct: 166 RDEYDDLSDLNAVQMESVREWEMQFKE----KYDYVGRLLKPG 204
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEE 586
QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 189 QFKEKYDYVGRLLKPGEEPSEYTDEE 214
>BC092478-1|AAH92478.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 115 bits (277), Expect = 1e-25
Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV--TAP 440
+LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+RGLATF + A
Sbjct: 107 QLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDAL 165
Query: 441 EKDYDDLSDLNSMEMESVREWEDNLERIMIWSVDF*GLVKNPG 569
+YDDLSDLN+++MESVREWE + D+ G + PG
Sbjct: 166 RDEYDDLSDLNAVQMESVREWEMQFKE----KYDYVGRLLKPG 204
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEE 586
QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 189 QFKEKYDYVGRLLKPGEEPSEYTDEE 214
>BC016692-1|AAH16692.1| 223|Homo sapiens progesterone receptor
membrane component 2 protein.
Length = 223
Score = 115 bits (277), Expect = 1e-25
Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV--TAP 440
+LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+RGLATF + A
Sbjct: 107 QLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDAL 165
Query: 441 EKDYDDLSDLNSMEMESVREWEDNLERIMIWSVDF*GLVKNPG 569
+YDDLSDLN+++MESVREWE + D+ G + PG
Sbjct: 166 RDEYDDLSDLNAVQMESVREWEMQFKE----KYDYVGRLLKPG 204
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEE 586
QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 189 QFKEKYDYVGRLLKPGEEPSEYTDEE 214
>AJ002030-1|CAA05152.1| 223|Homo sapiens progresterone binding
protein protein.
Length = 223
Score = 115 bits (277), Expect = 1e-25
Identities = 56/103 (54%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV--TAP 440
+LRQYDG++ R+L+AVNG +FDVT+G++FYGP GPY +F GRDA+RGLATF + A
Sbjct: 107 QLRQYDGSRNP-RILLAVNGKVFDVTKGSKFYGPAGPYGIFAGRDASRGLATFCLDKDAL 165
Query: 441 EKDYDDLSDLNSMEMESVREWEDNLERIMIWSVDF*GLVKNPG 569
+YDDLSDLN+++MESVREWE + D+ G + PG
Sbjct: 166 RDEYDDLSDLNAVQMESVREWEMQFKE----KYDYVGRLLKPG 204
Score = 47.6 bits (108), Expect = 4e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEE 586
QF+E YD VGRLL+PGEEP Y+DEE
Sbjct: 189 QFKEKYDYVGRLLKPGEEPSEYTDEE 214
>Y12711-1|CAA73248.1| 195|Homo sapiens putative progesterone
binding protein protein.
Length = 195
Score = 105 bits (253), Expect = 1e-22
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV-- 431
T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+RGLATF +
Sbjct: 74 TPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDK 132
Query: 432 TAPEKDYDDLSDLNSMEMESVREWE 506
A + +YDDLSDL + + E++ +WE
Sbjct: 133 EALKDEYDDLSDLTAAQQETLSDWE 157
Score = 40.7 bits (91), Expect = 0.005
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 622
QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 159 QFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>DQ496104-1|ABF47093.1| 195|Homo sapiens progesterone receptor
membrane component 1 protein.
Length = 195
Score = 105 bits (253), Expect = 1e-22
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV-- 431
T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+RGLATF +
Sbjct: 74 TPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDK 132
Query: 432 TAPEKDYDDLSDLNSMEMESVREWE 506
A + +YDDLSDL + + E++ +WE
Sbjct: 133 EALKDEYDDLSDLTAAQQETLSDWE 157
Score = 40.7 bits (91), Expect = 0.005
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 622
QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 159 QFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>CR456993-1|CAG33274.1| 195|Homo sapiens PGRMC1 protein.
Length = 195
Score = 105 bits (253), Expect = 1e-22
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV-- 431
T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+RGLATF +
Sbjct: 74 TPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDK 132
Query: 432 TAPEKDYDDLSDLNSMEMESVREWE 506
A + +YDDLSDL + + E++ +WE
Sbjct: 133 EALKDEYDDLSDLTAAQQETLSDWE 157
Score = 40.7 bits (91), Expect = 0.005
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 622
QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 159 QFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>BC034238-1|AAH34238.1| 195|Homo sapiens progesterone receptor
membrane component 1 protein.
Length = 195
Score = 105 bits (253), Expect = 1e-22
Identities = 48/85 (56%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSV-- 431
T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP GPY VF GRDA+RGLATF +
Sbjct: 74 TPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDK 132
Query: 432 TAPEKDYDDLSDLNSMEMESVREWE 506
A + +YDDLSDL + + E++ +WE
Sbjct: 133 EALKDEYDDLSDLTAAQQETLSDWE 157
Score = 40.7 bits (91), Expect = 0.005
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = +2
Query: 509 QFRENYDLVGRLLRPGEEPRNYSDEEPEEADTSALPND 622
QF Y VG+LL+ GEEP YSDEE E D SA ND
Sbjct: 159 QFTFKYHHVGKLLKEGEEPTVYSDEE-EPKDESARKND 195
>BC008823-1|AAH08823.1| 172|Homo sapiens neuron derived
neurotrophic factor protein.
Length = 172
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 437
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 438 PEKDYDDLSDLNSMEMESVRE 500
+ + D + L + E+E++ E
Sbjct: 108 ADLTH-DTTGLTAKELEALDE 127
>AY762102-1|AAX07829.1| 172|Homo sapiens cell growth-inhibiting
protein 47 protein.
Length = 172
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 437
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 438 PEKDYDDLSDLNSMEMESVRE 500
+ + D + L + E+E++ E
Sbjct: 108 ADLTH-DTTGLTAKELEALDE 127
>AF173937-1|AAD51419.1| 172|Homo sapiens secreted protein of
unknown function protein.
Length = 172
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 437
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 438 PEKDYDDLSDLNSMEMESVRE 500
+ + D + L + E+E++ E
Sbjct: 108 ADLTH-DTTGLTAKELEALDE 127
>AB126219-1|BAD72063.1| 172|Homo sapiens neudesin protein protein.
Length = 172
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 437
T EL +Y G +E + +AV G +FDVT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 438 PEKDYDDLSDLNSMEMESVRE 500
+ + D + L + E+E++ E
Sbjct: 108 ADLTH-DTTGLTAKELEALDE 127
>AK223135-1|BAD96855.1| 172|Homo sapiens SCIRP10-related protein
variant protein.
Length = 172
Score = 64.5 bits (150), Expect = 3e-10
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTA 437
T EL +Y G +E + +AV G +F+VT G FYG G PY G+D+TRG+A S+
Sbjct: 48 TEEELARYGGEEEDQPIYLAVKGVVFEVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDP 107
Query: 438 PEKDYDDLSDLNSMEMESVRE 500
+ + D + L + E+E++ E
Sbjct: 108 ADLTH-DTTGLTAKELEALDE 127
>BC051697-1|AAH51697.1| 264|Homo sapiens cytochrome b5 domain
containing 2 protein.
Length = 264
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEK 446
EL +Y G + +A+ G ++DV+ G R Y PG Y+ F GRDA+R T +
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 447 DYDDLSDLNSMEMESVREW 503
DD+SDL++ EM ++ W
Sbjct: 102 -VDDVSDLSAAEMLTLHNW 119
>BC020263-1|AAH20263.1| 264|Homo sapiens cytochrome b5 domain
containing 2 protein.
Length = 264
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEK 446
EL +Y G + +A+ G ++DV+ G R Y PG Y+ F GRDA+R T +
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 447 DYDDLSDLNSMEMESVREW 503
DD+SDL++ EM ++ W
Sbjct: 102 -VDDVSDLSAAEMLTLHNW 119
>AK172844-1|BAD18808.1| 264|Homo sapiens protein ( Homo sapiens
cDNA FLJ24005 fis, clone KAT01883. ).
Length = 264
Score = 56.0 bits (129), Expect = 1e-07
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 267 ELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEK 446
EL +Y G + +A+ G ++DV+ G R Y PG Y+ F GRDA+R T +
Sbjct: 42 ELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGL 101
Query: 447 DYDDLSDLNSMEMESVREW 503
DD+SDL++ EM ++ W
Sbjct: 102 -VDDVSDLSAAEMLTLHNW 119
>AJ249131-1|CAB65109.1| 109|Homo sapiens progesterone membrane
binding protein protein.
Length = 109
Score = 52.8 bits (121), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%)
Frame = +3
Query: 258 TAVELRQYDGTQEGGRVLMAVNGWIFDVTRGNRFYGP 368
T ELR++DG Q+ R+LMA+NG +FDVT+G +FYGP
Sbjct: 74 TPAELRRFDGVQDP-RILMAINGKVFDVTKGRKFYGP 109
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 303 RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDD 458
+ L+ G+ DVT G R YG P +V+ G G F P Y+D
Sbjct: 105 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYED 156
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 303 RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDD 458
+ L+ G+ DVT G R YG P +V+ G G F P Y+D
Sbjct: 102 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYED 153
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 303 RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDD 458
+ L+ G+ DVT G R YG P +V+ G G F P Y+D
Sbjct: 128 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYED 179
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 303 RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDD 458
+ L+ G+ DVT G R YG P +V+ G G F P Y+D
Sbjct: 128 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYED 179
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 303 RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDD 458
+ L+ G+ DVT G R YG P +V+ G G F P Y+D
Sbjct: 128 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYED 179
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 31.9 bits (69), Expect = 2.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 303 RVLMAVNGWIFDVTRGNRFYGPGGPYAVFGGRDATRGLATFSVTAPEKDYDD 458
+ L+ G+ DVT G R YG P +V+ G G F P Y+D
Sbjct: 128 KALLERTGYTLDVTTGQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYED 179
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 433 VTENVASPLVASLPPKTAYGPPGP*NR-FPLVTSNIHPFTAINTLPPSCVPS 281
+T P PP T P P P T+ I P T+ TLPP+ PS
Sbjct: 966 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1017
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 436 AVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPS 281
A T + S P T PP P T+ I P T+ TLPP+ PS
Sbjct: 887 ASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 938
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 433 VTENVASPLVASLPPKTAYGPPGP*NR-FPLVTSNIHPFTAINTLPPSCVPS 281
+T P PP T P P P T+ I P T+ TLPP+ PS
Sbjct: 249 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 300
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 436 AVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPS 281
A T + S P T PP P T+ I P T+ TLPP+ PS
Sbjct: 170 ASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 221
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 31.1 bits (67), Expect = 3.8
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 433 VTENVASPLVASLPPKTAYGPPGP*NR-FPLVTSNIHPFTAINTLPPSCVPS 281
+T P PP T P P P T+ I P T+ TLPP+ PS
Sbjct: 1591 ITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1642
Score = 29.9 bits (64), Expect = 8.8
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -1
Query: 436 AVTENVASPLVASLPPKTAYGPPGP*NRFPLVTSNIHPFTAINTLPPSCVPS 281
A T + S P T PP P T+ I P T+ TLPP+ PS
Sbjct: 1512 ASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1563
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,965,530
Number of Sequences: 237096
Number of extensions: 2332327
Number of successful extensions: 6120
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6094
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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