BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30124.Seq
(669 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase pr... 24 5.0
AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding pr... 23 6.6
AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding pr... 23 6.6
AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding pr... 23 6.6
AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase... 23 6.6
DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted ... 23 8.7
AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding pr... 23 8.7
AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding pr... 23 8.7
>Z49815-1|CAA89969.1| 237|Anopheles gambiae serine proteinase
protein.
Length = 237
Score = 23.8 bits (49), Expect = 5.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -3
Query: 565 MLLEVIGIRCPLSLANPRLILTHGHSLSWGIPKQCKARRY 446
MLL C SL N R I+T H + P+Q A+ Y
Sbjct: 17 MLLYRGAFYCGGSLINDRYIVTAAHCVLSFTPQQLLAKLY 56
>AY146758-1|AAO12073.1| 289|Anopheles gambiae odorant-binding
protein AgamOBP30 protein.
Length = 289
Score = 23.4 bits (48), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 119 ERGSSH*EITGYAKEAFFCHQEEEGNL 199
+R + H E A E+F C+ E GNL
Sbjct: 135 DRPAPHDEACERAYESFRCYYEHYGNL 161
>AJ618930-1|CAF02010.2| 273|Anopheles gambiae odorant-binding
protein OBPjj83c protein.
Length = 273
Score = 23.4 bits (48), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 119 ERGSSH*EITGYAKEAFFCHQEEEGNL 199
+R + H E A E+F C+ E GNL
Sbjct: 119 DRPAPHDEACERAYESFRCYYEHYGNL 145
>AF393485-1|AAL60410.1| 289|Anopheles gambiae odorant binding
protein 1 protein.
Length = 289
Score = 23.4 bits (48), Expect = 6.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 119 ERGSSH*EITGYAKEAFFCHQEEEGNL 199
+R + H E A E+F C+ E GNL
Sbjct: 135 DRPAPHDEACERAYESFRCYYEHYGNL 161
>AF004916-1|AAB94672.1| 686|Anopheles gambiae pro-phenol oxidase
subunit 2 protein.
Length = 686
Score = 23.4 bits (48), Expect = 6.6
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 323 IRIRGINQVSPKSVKFCNC 379
+ + IN+ S + +FCNC
Sbjct: 564 VALSNINEPSTEQFRFCNC 582
>DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted
carbonic anhydrase protein.
Length = 318
Score = 23.0 bits (47), Expect = 8.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 526 LANPRLILTHGHSLSWGIPK 467
L P I +GHS+S IPK
Sbjct: 84 LPGPMTIHNNGHSVSLSIPK 103
>AY146755-1|AAO12070.1| 320|Anopheles gambiae odorant-binding
protein AgamOBP32 protein.
Length = 320
Score = 23.0 bits (47), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 128 SSH*EITGYAKEAFFCHQEEEGNL 199
S H ++ A E+F C+ E+ GN+
Sbjct: 122 SPHVDVCERAYESFRCYYEQYGNI 145
>AY146754-1|AAO12069.1| 334|Anopheles gambiae odorant-binding
protein AgamOBP33 protein.
Length = 334
Score = 23.0 bits (47), Expect = 8.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 128 SSH*EITGYAKEAFFCHQEEEGNL 199
S H ++ A E+F C+ E+ GN+
Sbjct: 122 SPHVDVCERAYESFRCYYEQYGNI 145
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,261
Number of Sequences: 2352
Number of extensions: 13005
Number of successful extensions: 64
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -