Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30123.Seq
(694 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 152 3e-37
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 151 7e-37
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 150 9e-37
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 147 6e-36
03_01_0034 + 318432-318825,318902-319851 147 6e-36
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 147 6e-36
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 142 2e-34
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 140 1e-33
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 87 2e-17
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 86 2e-17
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 86 3e-17
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 83 2e-16
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 60 1e-09
06_03_1025 - 26980631-26981286,26981434-26981557,26982290-269824... 31 0.87
12_01_0633 - 5241098-5241283,5241361-5241453,5241555-5241615,524... 30 2.0
08_01_0431 + 3779519-3780393,3780402-3780768 29 2.6
05_07_0031 - 27183252-27183317,27183542-27184282 29 3.5
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 29 4.6
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 29 4.6
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 28 6.1
05_03_0485 + 14608663-14608989,14609265-14609535,14609720-146098... 28 8.1
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 152 bits (368), Expect = 3e-37
Identities = 76/145 (52%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEAS G+YVPR VL+DL+P TMD+VRSGPFG +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + V + + + P
Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F F P+ VVEPYN TL
Sbjct: 163 MMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVI DEHG+D +G Y GDSDL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL 42
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 DCLQVFR-CHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ CH+ +++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 128 DCLQGFQVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 151 bits (365), Expect = 7e-37
Identities = 75/145 (51%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEAS G+YVPR VL+DL+P TMD+VRSGP+G +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + V + + + P
Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F F P+ VVEPYN TL
Sbjct: 163 MMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVI DEHGID +G Y GDSDL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL 42
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 DCLQVFR-CHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ CH+ +++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 128 DCLQGFQVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 150 bits (364), Expect = 9e-37
Identities = 75/145 (51%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEAS G++VPR VL+DL+P TMD+VRSGPFG +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + V + + + P
Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F F P+ VVEPYN TL
Sbjct: 163 MMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVI DEHGID +G Y GDSDL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL 42
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 DCLQVFR-CHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ CH+ +++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 128 DCLQGFQVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 147 bits (357), Expect = 6e-36
Identities = 72/145 (49%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLER+NVYYNEAS G++VPR VL+DL+P TMD+VR+GP+G +FRPDNFV+GQ+ A NNWA
Sbjct: 223 QLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA 282
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + V + + + P
Sbjct: 283 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 342
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F F P+ VVEPYN TL
Sbjct: 343 MMLTFSVFPSPKVSDTVVEPYNATL 367
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +1
Query: 127 KMREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
KMREI+++Q G CGNQIG KFWEV+ DEHGIDP+G Y G SDL
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL 222
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 DCLQVFR-CHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ CH+ +++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 308 DCLQGFQVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 357
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 147 bits (357), Expect = 6e-36
Identities = 72/145 (49%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLER+NVYYNEAS G++VPR VL+DL+P TMD+VRSGP+G +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDV+R+EAE + V + + + P
Sbjct: 103 KGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F F P+ VVEPYN TL
Sbjct: 163 MMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEV+ EHGID +G Y GDSDL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL 42
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 DCLQVFR-CHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ CH+ +++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 128 DCLQGFQVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 147 bits (357), Expect = 6e-36
Identities = 72/145 (49%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLER+NVYYNEAS G++VPR VL+DL+P TMD+VR+GP+G +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + V + + + P
Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F F P+ VVEPYN TL
Sbjct: 163 MMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEV+ DEHGIDP+G Y G SDL
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDL 42
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 509 DCLQVFR-CHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ CH+ +++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 128 DCLQGFQVCHS-LGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSD 177
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 142 bits (345), Expect = 2e-34
Identities = 59/83 (71%), Positives = 75/83 (90%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLER+NVYYNEAS G++VPR VL+DL+P TMD+VR+GP+G +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAE 503
KGHYTEG E+++S LDV+R+EAE
Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAE 125
Score = 73.7 bits (173), Expect = 1e-13
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEV+ DEHGIDP+G Y G+SDL
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL 42
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/26 (76%), Positives = 26/26 (100%)
Frame = +2
Query: 581 VNRIREEYPDRIILTFSVFPSPRVSD 658
+++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 173 ISKIREEYPDRMMLTFSVFPSPKVSD 198
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 140 bits (338), Expect = 1e-33
Identities = 59/83 (71%), Positives = 74/83 (89%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVY+NEAS G++VPR VL+DL+P TMD++RSGP G +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYFNEASGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAE 503
KGHYTEG E+++S LDV+R+EAE
Sbjct: 103 KGHYTEGAELIDSVLDVVRKEAE 125
Score = 66.9 bits (156), Expect = 1e-11
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDS 249
MREI+++Q G CGNQIG KFWEVI EHG+DP+G Y G S
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTS 40
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/26 (76%), Positives = 26/26 (100%)
Frame = +2
Query: 581 VNRIREEYPDRIILTFSVFPSPRVSD 658
+++IREEYPDR++LTFSVFPSP+VSD
Sbjct: 168 ISKIREEYPDRMMLTFSVFPSPKVSD 193
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARG 106
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G EI++ LD IR+ A+
Sbjct: 107 HYTIGKEIVDLCLDRIRKLAD 127
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGD 246
MRE I++ +G G Q+G WE+ EHGI P G GD
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGD 39
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 86.2 bits (204), Expect = 2e-17
Identities = 35/81 (43%), Positives = 56/81 (69%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR + +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARG 106
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G EI++ LD +R+ A+
Sbjct: 107 HYTVGKEIVDLCLDRVRKLAD 127
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDS 249
MREII++ +G G Q+G WE+ EHGI+P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDT 40
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARG 106
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G EI++ LD IR+ A+
Sbjct: 107 HYTIGKEIVDLCLDRIRKLAD 127
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSG 231
MRE I++ +G G Q+G WE+ EHGI G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADG 34
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 83.0 bits (196), Expect = 2e-16
Identities = 33/81 (40%), Positives = 57/81 (70%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E S+GK+VPR + +DL+P +D V++GP+ LF P+ + + AANN+A+G
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARG 166
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G E+++ LD +R+ A+
Sbjct: 167 HYTVGREVVDLCLDRLRKLAD 187
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDS 249
MREII++ +G G Q+G WE+ EHGI P G D+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRDA 40
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/84 (30%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQN--CAANNWA 434
+R +V++ +A Y+PR +L+DL+P ++ +++ + L+ +N ++ A NNWA
Sbjct: 46 DRKDVFFYQADDQHYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWA 105
Query: 435 KGHYTEGVEILESALDVIRREAEG 506
G Y +G ++++ +D+I REA+G
Sbjct: 106 SG-YHQGEQVVDDIMDMIDREADG 128
Score = 48.0 bits (109), Expect = 7e-06
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSG 231
REII +QVG CGNQIG +FW+ + EHGI G
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDG 35
>06_03_1025 -
26980631-26981286,26981434-26981557,26982290-26982426,
26983220-26983355,26983615-26983922,26985159-26985207
Length = 469
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Frame = -3
Query: 464 NLYSFSVVSLRPVVGRTVLSVDEIVRSE*ASEGSRPHRVHRGRL-QVDKNRARNIFPSRC 288
++Y F VV L ++GR + R E +RP VH +L ++ R + ++
Sbjct: 259 DVYGFGVVLLEMIIGRRAVDKSRPSREHNLVEWARPLLVHNRKLFRIIDPRMEGQYSTKA 318
Query: 287 LVVVHVDPFELRSESPW*HPLGSMPCSSDITSQNFP 180
+ V + S++P P S + QN P
Sbjct: 319 AIEVAGLAYRCLSQNPKGRPTMSQVVETFEAVQNMP 354
>12_01_0633 -
5241098-5241283,5241361-5241453,5241555-5241615,
5241703-5241813,5241960-5242145,5242229-5242590,
5242730-5243152,5243159-5244382,5244468-5244707
Length = 961
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 205 DEHGIDPSGCYHGDSDLNSKGSTCTTTRHR 294
D HG +GC H D ++G C T+R +
Sbjct: 602 DSHGDSSAGCAHRDYSGRTRGGICGTSREK 631
>08_01_0431 + 3779519-3780393,3780402-3780768
Length = 413
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 190 WEVISDEHGIDPSGCYHGDSDLNSKGSTCTTTRHRLGNMFLARFLST*SRPRW 348
W + D+ I G DL G+ C+T R R ST +RP W
Sbjct: 10 WSALPDDVVITVMGYLADPDDLVRSGAVCSTWRAAYATFRRLRLPSTTARPPW 62
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -3
Query: 410 LSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRCLVVVHVDPFELRSE 246
L+ +EI A GSRP R R R +V + + ++FP L V D + + E
Sbjct: 214 LTPEEIEEDIYALTGSRPRRRPRKRPRVVQRQLDSLFPGLWLTEVTADAYRVPDE 268
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFW 192
MRE + +QVG N +G FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 28.7 bits (61), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFW 192
MRE + +QVG N +G FW
Sbjct: 1 MREAVTVQVGGFANYVGSHFW 21
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 300 KYVPRTVLIDLKPATMDAVRSGPFGCLF 383
KY P T LIDL+P + A+R+ + L+
Sbjct: 1298 KYAPPTELIDLQPLPVTALRNARYESLY 1325
>05_03_0485 +
14608663-14608989,14609265-14609535,14609720-14609830,
14609870-14610423
Length = 420
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Frame = +3
Query: 330 LKPATMDAVRSG--PFGCLFRPDNFVYGQNCAANNWAK-----GHYTEGVEILESALDVI 488
+K + D VR PF L R ++ Y + A N W K H + E+L + LD++
Sbjct: 69 IKGVSPDTVRLRLFPFSLLGRAKHWFYANSAAVNTWDKCSMRGMHTVKETELLTAKLDLL 128
Query: 489 RREAE 503
+ +
Sbjct: 129 MKRLD 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,717,004
Number of Sequences: 37544
Number of extensions: 391881
Number of successful extensions: 1161
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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