Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30123.Seq
(694 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 152 3e-37
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 151 7e-37
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 150 9e-37
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 125 3e-29
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 111 7e-25
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 89 4e-18
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 89 4e-18
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 7e-18
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 88 7e-18
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 86 2e-17
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 5e-17
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 7e-17
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 59 3e-09
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 54 8e-08
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 53 3e-07
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 51 8e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 41 0.001
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 31 0.67
SB_33414| Best HMM Match : TSP_1 (HMM E-Value=0.00041) 31 0.89
SB_18800| Best HMM Match : Cytomega_UL20A (HMM E-Value=7.7) 30 1.5
SB_6478| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0) 28 6.2
SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 152 bits (368), Expect = 3e-37
Identities = 76/145 (52%), Positives = 95/145 (65%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEA+ GKYVPR+VLIDL+P TMD+VRSGPFG +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEATGGKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + +T + + + P
Sbjct: 103 KGHYTEGAELMDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMNTFSIVPSPKVSDTVVEPYNATL 187
Score = 85.4 bits (202), Expect = 4e-17
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI++LQ G CGNQIG KFWEVISDEHGIDP+G YHGDSDL
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/50 (44%), Positives = 30/50 (60%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DC+Q F+ +++IREEYPDRI+ TFS+ PSP+VSD
Sbjct: 128 DCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSD 177
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 151 bits (365), Expect = 7e-37
Identities = 75/145 (51%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEA+ GKYVPR VL+DL+P TMD+VRSGPFG +FRPDNFV+GQ+ A NNWA
Sbjct: 256 QLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 315
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + +T + + + P
Sbjct: 316 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 375
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 376 IMNTFSVVPSPKVSDTVVEPYNATL 400
Score = 85.4 bits (202), Expect = 4e-17
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 127 KMREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
KMREI++ Q G CGNQIG KFWEVISDEHGIDP+G YHGDSDL
Sbjct: 213 KMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 255
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ +++IREEYPDRI+ TFSV PSP+VSD
Sbjct: 341 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 390
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 150 bits (364), Expect = 9e-37
Identities = 74/145 (51%), Positives = 94/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEA+ GKYVPR +L+DL+P TMD+VRSGPFG +FRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E+++S LDV+R+EAE + +T + + + P
Sbjct: 103 KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMNTFSVVPSPKVSDTVVEPYNATL 187
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI++ Q G CGNQIG KFWEVISDEHGIDP+G YHGDSDL
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ +++IREEYPDRI+ TFSV PSP+VSD
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 177
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 125 bits (302), Expect = 3e-29
Identities = 63/131 (48%), Positives = 80/131 (61%)
Frame = +3
Query: 297 GKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESA 476
GKYVPR VL+DL+P TMD+VRSGPFG +FRPDNFV+GQ+ A NNWAKGHYTEG E+++S
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 477 LDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTELY*PFQSFQVPECR 656
LDV+R+EAE + +T + + P + F P+
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVS 121
Query: 657 ICVVEPYNTTL 689
VVEPYN TL
Sbjct: 122 DTVVEPYNATL 132
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DC+Q F+ + +IREEYPDRI+ TFSV PSP+VSD
Sbjct: 73 DCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSD 122
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 111 bits (266), Expect = 7e-25
Identities = 45/71 (63%), Positives = 60/71 (84%)
Frame = +3
Query: 291 SAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILE 470
+ G+YVPR++L+DL+P TMDAVR GP G +FRPDNFV Q+ AANNWAKGHY+EG E+++
Sbjct: 11 TGGRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELID 70
Query: 471 SALDVIRREAE 503
+ DV+R+EAE
Sbjct: 71 NIFDVLRKEAE 81
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRV 652
DC+Q + +++IREEYPDRI+ FSV PSP+V
Sbjct: 84 DCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 93.5 bits (222), Expect = 1e-19
Identities = 39/50 (78%), Positives = 46/50 (92%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVY 404
QLERINVYYNEA+ GKYVPR +L+DL+P TMD+VRSGPFG +FRPDNFV+
Sbjct: 43 QLERINVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI++ Q G CGNQIG KFWEVISDEHGIDP+G YHGDSDL
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 88.6 bits (210), Expect = 4e-18
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 46 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 105
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IR+ A +G+ I F T + + R + Y K
Sbjct: 106 HYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD---YGK 162
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 163 KSKLE----FAIYPAPQVSTAVVEPYNSIL 188
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
RE I++ VG G QIG WE+ EHGI P G D + + T
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 50
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 88.6 bits (210), Expect = 4e-18
Identities = 55/150 (36%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ V G+ AANN+A+G
Sbjct: 47 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARG 106
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IR+ A +G+ I F T + + R + Y K
Sbjct: 107 HYTVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 163
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 164 KSKLE----FAIYPAPQVSTAVVEPYNSIL 189
Score = 88.2 bits (209), Expect = 6e-18
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 480 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 539
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IR+ A +G+ I F T + + R + Y K
Sbjct: 540 HYTVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 596
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 597 KSKLE----FAIYPAPQVSTAVVEPYNSIL 622
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE I++ VG G QIG WE+ EHGI P G D + + T
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 51
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
RE I++ VG G QIG WE+ EHGI P G D + + T
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 484
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 87.8 bits (208), Expect = 7e-18
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E +GK+VPR V DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DSFNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 441 HYTEGVEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G E++++ LD +R+ A+G I F T + + R + Y K
Sbjct: 107 HYTVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 163
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 164 KSKLE----FAIYPAPQISTAVVEPYNSVL 189
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE I++ VG G Q+G WE+ EHGI P G D + + T
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 51
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 87.8 bits (208), Expect = 7e-18
Identities = 54/150 (36%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 111 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 170
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IR+ A +G+ I F T + + R + Y K
Sbjct: 171 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 227
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 228 KSKLE----FAIYPAPQISTAVVEPYNSIL 253
Score = 87.8 bits (208), Expect = 7e-18
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 632 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 691
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G E+++ LD IR+ A +G+ I F T + + R + Y K
Sbjct: 692 HYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 748
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 749 KSKLE----FAIYPAPQVSTAVVEPYNSIL 774
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 121 INKMREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
+ RE I++ VG G QIG WE+ EHGI P G D + + T
Sbjct: 510 VEYQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 563
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
+RE I++ VG G QIG WE+ EHGI P G D + + T
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 636
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
RE I++ VG G QIG WE+ EHGI P G D + + T
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 115
Score = 36.7 bits (81), Expect = 0.018
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAV 356
+ N +++E AGK+VPR V +DL+P + +
Sbjct: 559 DSFNTFFSETGAGKHVPRAVFVDLEPTVRECI 590
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 86.2 bits (204), Expect = 2e-17
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P+ +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 465 DSFNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARG 524
Query: 441 HYTEGVEILESALDVIRREA------EGWIAC-KFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G + +++ LD IR+ A +G++ F T + + R + Y K
Sbjct: 525 HYTVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVD---YGK 581
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 582 KSKLE----FAIYPAPQISTAVVEPYNSVL 607
Score = 85.4 bits (202), Expect = 4e-17
Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 32 DSFNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 91
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G +++E LD +R+ A +G+ I F T + + R + Y K
Sbjct: 92 HYTVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 148
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 149 KSKLE----FAIYPAPQISTAVVEPYNSIL 174
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
RE +++ VG G Q+G WE+ EHGI P G D + + T
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 469
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 86.2 bits (204), Expect = 2e-17
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 106
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD R+ A +G+ I F T + + R + Y K
Sbjct: 107 HYTIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVD---YGK 163
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 164 KSKLE----FAIYPAPQISTAVVEPYNSIL 189
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE I++ VG G Q+G WE+ EHGI P G D + + T
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 51
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 85.8 bits (203), Expect = 3e-17
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 851 DSFNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 910
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G E+++ LD IR+ A +G+ I F T + + R + Y K
Sbjct: 911 HYTVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD---YGK 967
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 968 KSKLE----FAIYPAPQISTAVVEPYNSIL 993
Score = 85.4 bits (202), Expect = 4e-17
Identities = 36/82 (43%), Positives = 55/82 (67%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N ++ E AGK+VPR V +DL+P +D VR+G + LF P+ + G+ AANN+A+G
Sbjct: 418 DAFNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARG 477
Query: 441 HYTEGVEILESALDVIRREAEG 506
HYT G E ++ LD +R+ A+G
Sbjct: 478 HYTVGKEQIDIVLDRLRKLADG 499
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
RE I++ VG G QIG WE+ EHGI P G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
RE I++ VG G Q+G WE+ EHGI P G D + + T
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNT 855
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 85.0 bits (201), Expect = 5e-17
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N ++ E AGK+VPR V +DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARG 71
Query: 441 HYTEGVEILESALDVIRREA------EGW-IACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G E ++ ALD IR+ A +G+ I F T + + R + Y K
Sbjct: 72 HYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD---YGK 128
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 129 KSKLE----FAVYPAPQISTAVVEPYNSIL 154
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 84.6 bits (200), Expect = 7e-17
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +3
Query: 282 NEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVE 461
+EA+AGKYVPR VL+DL+P +D VR+G + L+ P+ + G+ AANN+A+GHYT G E
Sbjct: 965 SEAAAGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKE 1024
Query: 462 ILESALDVIRR 494
++E +D IR+
Sbjct: 1025 MVEVVMDKIRK 1035
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/81 (34%), Positives = 47/81 (58%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR V +DL+P + P+ + G+ AANN+A+G
Sbjct: 47 DSFNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARG 96
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G + ++ LD +R+ A+
Sbjct: 97 HYTIGKQQVDQVLDRLRKLAD 117
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSG 231
MRE I++ VG G QIG WE+ EHGI P G
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG 34
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Frame = +3
Query: 348 DAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVIRREA------EGW 509
D VR+G + LF P+ + G+ AANN+A+GHYT G E+++ LD IR+ A +G+
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 510 -IACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTELY*PFQSFQVPECRICVVEPYNTT 686
I F T + + R + Y K E F + P+ VVEPYN+
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVD---YGKKSKLE----FAIYPAPQISTAVVEPYNSI 125
Query: 687 L 689
L
Sbjct: 126 L 126
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 54.4 bits (125), Expect = 8e-08
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Frame = +3
Query: 354 VRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVIRREA------EGW-I 512
VR+G + LF P+ + G+ AANN+A+GHYT G E+++ LD IR+ A +G+ I
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 513 ACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTELY*PFQSFQVPECRICVVEPYNTTL 689
F T + + R + Y K E F + P+ VVEPYN+ L
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVD---YGKKSKLE----FAIYPAPQISTAVVEPYNSIL 114
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 52.8 bits (121), Expect = 3e-07
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Frame = +3
Query: 354 VRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVIRREA------EGW-I 512
+R+G + LF P+ + G+ AANN+A+GHYT G E ++ ALD IR+ A +G+ I
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 513 ACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTELY*PFQSFQVPECRICVVEPYNTTL 689
F T + + R + Y K E F + P+ VVEPYN+ L
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVD---YGKKSKLE----FAVYPAPQISTAVVEPYNSIL 114
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +3
Query: 354 VRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVIRR 494
VR+G + LF P+ + G+ AANN+A+GHYT G E+++ LD IR+
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 51.2 bits (117), Expect = 8e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 408 QNCAANNWAKGHYTEGVEILESALDVIRREAE 503
QN AANNWAKG YTEG E+++S +D IR+ AE
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAE 33
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +2
Query: 461 DSGVCFRCHSKGS*GLDCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFP 640
DSG+ C K + D +Q F+ +++IREEYPDR++ +F V P
Sbjct: 22 DSGM--DCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIREEYPDRLVSSFCVLP 79
Query: 641 SPRVSD 658
SP VS+
Sbjct: 80 SPLVSE 85
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 354 VRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEGVEILESALDVIRR 494
VR G + LF PD + G+ AANN+A+GHYT G E ++ L+ IR+
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/44 (47%), Positives = 25/44 (56%)
Frame = +1
Query: 121 INKMREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSD 252
I MRE +++ VG G QIG WE+ EHGI P G H SD
Sbjct: 193 IQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSD 234
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE I++ VG G QIG WE+ EHGI P G D ++ + T
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNT 51
Score = 34.7 bits (76), Expect = 0.072
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVR 359
+ N +++E GK+VPR V +DL+P+ + ++
Sbjct: 47 DSFNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = +2
Query: 590 IREEYPDRIILTFSVFPSPRVSDL 661
++EEYPDRI+ + SVFPSPRVS++
Sbjct: 36 LQEEYPDRILSSVSVFPSPRVSEI 59
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 34.3 bits (75), Expect = 0.095
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 187 FWEVISDEHGIDPSG 231
FWEVI++EHGIDP G
Sbjct: 1 FWEVIAEEHGIDPDG 15
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 139 IINLQVGSCGNQIGGKFWEVISDE 210
I+ LQ+G CGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 417 AANNWAKGHYTEGVEILESALDVIRREAE 503
+ NNWA G G + ++ LD+++RE E
Sbjct: 105 SGNNWAHGFSEHGPKSIDKVLDLVQREVE 133
>SB_33414| Best HMM Match : TSP_1 (HMM E-Value=0.00041)
Length = 428
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 426 NWAKGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSI 605
N + Y E ESAL+ + +E EG++ + D++ + +R RY + T ++ +
Sbjct: 299 NKSSEDYKAEKERFESALEPVMKETEGFLDAEVIDMSKGSIMFTYRARYRRTSTITSERM 358
Query: 606 PTELY 620
+ LY
Sbjct: 359 RSTLY 363
>SB_18800| Best HMM Match : Cytomega_UL20A (HMM E-Value=7.7)
Length = 140
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +3
Query: 420 ANNWAKGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS 581
A+ + H T+ E ++ + IR WI + SDV L W+ R+R +T+
Sbjct: 79 ASTAPRTHETDKSERTKTIIKTIRVSDVNWIDWQVSDVNLIDWQVSERVRDSTA 132
>SB_6478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +2
Query: 278 LQRGIGWEICSSHGSYRLEAGHDGRGEVGTLRMPIQTGQFRLRTKLCGQQL 430
L G G + SY L+ G D + L+ P+ G F +L +Q+
Sbjct: 350 LNTGFGNALVGFFKSYSLDPGGDSENSLNRLQNPVDPGNFLFPEELSNEQI 400
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +2
Query: 581 VNRIREEYPDRIILTFSVFPSPRVS 655
+ +++E+YPD I+ +F +FP + S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_48964| Best HMM Match : TRAP_240kDa (HMM E-Value=0)
Length = 1227
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 604 ILFAYPVHEVAYLIRNRYRHLASVTSENLQAIQPSASLRMTSKADSRI 461
I F + V L+RNR + + + Q IQPSA L + SK R+
Sbjct: 975 IFFTFSVKNHRILLRNRPKAGTASNAFCKQGIQPSAILDVDSKISFRV 1022
>SB_43063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -1
Query: 619 YNSVGILFAYPVHEVAYLIRNRYRHLASVTSENLQAIQPSASLRMTSKADSRISTPSV*C 440
YN +GI FA V E ++ + A++ ++ + S L+M K + S V
Sbjct: 98 YNMIGIPFAAGVFEPLGVVMKPWMASAAMALSSVSVVTSSLMLKMYKKPEPDESQMGVRL 157
Query: 439 PFA 431
PF+
Sbjct: 158 PFS 160
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,579,411
Number of Sequences: 59808
Number of extensions: 450216
Number of successful extensions: 1340
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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