Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30123.Seq
(694 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 153 2e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 151 6e-37
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 150 8e-37
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 148 3e-36
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 146 1e-35
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 146 1e-35
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 99 3e-21
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 99 3e-21
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 89 3e-18
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 89 3e-18
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 88 6e-18
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 87 9e-18
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 87 9e-18
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 87 9e-18
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 87 9e-18
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 86 2e-17
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 86 2e-17
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 85 5e-17
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 85 5e-17
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 85 6e-17
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 84 8e-17
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 79 3e-15
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 79 3e-15
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 60 1e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 60 1e-09
AF038606-7|AAB92021.1| 344|Caenorhabditis elegans Hypothetical ... 33 0.26
Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 5.5
U42839-4|AAM54197.1| 114|Caenorhabditis elegans Hypothetical pr... 28 7.3
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 7.3
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 153 bits (370), Expect = 2e-37
Identities = 76/145 (52%), Positives = 95/145 (65%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEA+ GKYVPR VL+DL+P TMD+VRSGPFG LFRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEANGGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDV+R+EAEG + +T + + + P
Sbjct: 103 KGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMSSFSVVPSPKVSDTVVEPYNATL 187
Score = 76.2 bits (179), Expect = 2e-14
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVISDEHGI P G Y G+SDL
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL 42
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 503 GLDCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
G DCLQ F+ +++IREEYPDRI+ +FSV PSP+VSD
Sbjct: 126 GCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSD 177
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 151 bits (365), Expect = 6e-37
Identities = 76/145 (52%), Positives = 95/145 (65%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERI+VYYNEA+ GKYVPR VL+DL+P TMD+VRSGPFG LFRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDVIR+EAEG + +T + + + P
Sbjct: 103 KGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMSSFSVVPSPKVSDTVVEPYNATL 187
Score = 74.5 bits (175), Expect = 6e-14
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVISDEHGI P G + G+SDL
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL 42
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/52 (44%), Positives = 31/52 (59%)
Frame = +2
Query: 503 GLDCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
G DCLQ F+ +++IREE+PDRI+ +FSV PSP+VSD
Sbjct: 126 GCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSD 177
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 150 bits (364), Expect = 8e-37
Identities = 76/145 (52%), Positives = 95/145 (65%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERI+VYYNEA+ GKYVPR VL+DL+P TMD+VRSGPFG LFRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDVIR+EAEG + +T + + + P
Sbjct: 103 KGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMSSFSVVPSPKVSDTVVEPYNATL 187
Score = 73.3 bits (172), Expect = 1e-13
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVISDEHGI P G + G++DL
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL 42
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/52 (46%), Positives = 31/52 (59%)
Frame = +2
Query: 503 GLDCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
G DCLQ F+ +++IREEYPDRI+ +FSV PSP+VSD
Sbjct: 126 GCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSD 177
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 148 bits (359), Expect = 3e-36
Identities = 74/145 (51%), Positives = 93/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEAS GKYVPR L+DL+P TMD+VR+GPFG LFRPDNFV+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEASGGKYVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDV+R+EAE + +T + + + P
Sbjct: 103 KGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMMTFSVVPSPKVSDTVVEPYNATL 187
Score = 82.2 bits (194), Expect = 3e-16
Identities = 33/42 (78%), Positives = 38/42 (90%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVISDEHGIDP+G Y+GDSDL
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL 42
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/50 (48%), Positives = 31/50 (62%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ +++IREEYPDRI++TFSV PSP+VSD
Sbjct: 128 DCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSD 177
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 146 bits (355), Expect = 1e-35
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEA + KYVPR VL+DL+P TMD+VRSGPFG LFRPDN+V+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDV+R+EAE + +T + + + P
Sbjct: 103 KGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMNTFSVVPSPKVSDTVVEPYNATL 187
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVISDEHGIDPSG Y GDSDL
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL 42
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ +++IREEYPDRI+ TFSV PSP+VSD
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 177
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 146 bits (355), Expect = 1e-35
Identities = 73/145 (50%), Positives = 93/145 (64%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERINVYYNEA + KYVPR VL+DL+P TMD+VRSGPFG LFRPDN+V+GQ+ A NNWA
Sbjct: 43 QLERINVYYNEAGSNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWA 102
Query: 435 KGHYTEGVEILESALDVIRREAEGWIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
KGHYTEG E++++ LDV+R+EAE + +T + + + P
Sbjct: 103 KGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDR 162
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
+ F P+ VVEPYN TL
Sbjct: 163 IMNTFSVVPSPKVSDTVVEPYNATL 187
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
MREI+++Q G CGNQIG KFWEVISDEHGIDPSG Y GDSDL
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL 42
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 509 DCLQVFRCHTRXXXXXXXXXXRYFVNRIREEYPDRIILTFSVFPSPRVSD 658
DCLQ F+ +++IREEYPDRI+ TFSV PSP+VSD
Sbjct: 128 DCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSD 177
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERI YY E KYVPR +L+DL P +++ VRS +G LF P+N V G++ A NNW+
Sbjct: 43 QLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWS 102
Query: 435 KGHYTEGVEILESALDVIRREAE 503
+G+Y +G EI++ L VIRREAE
Sbjct: 103 RGYYEQGAEIVDKVLSVIRREAE 125
Score = 67.7 bits (158), Expect = 7e-12
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDS 249
M+EIIN+QVG CGNQIG KFWE IS+EHG+ G Y GD+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN 40
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 581 VNRIREEYPDRIILTFSVFPSPRVSD 658
++++REEY D+ + T S+ PS +VSD
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSAKVSD 177
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 99.1 bits (236), Expect = 3e-21
Identities = 44/83 (53%), Positives = 59/83 (71%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
QLERI YY E KYVPR +L+DL P +++ VRS +G LF P+N V G++ A NNW+
Sbjct: 43 QLERITSYYKEMEGRKYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWS 102
Query: 435 KGHYTEGVEILESALDVIRREAE 503
+G+Y +G EI++ L VIRREAE
Sbjct: 103 RGYYEQGAEIVDKVLSVIRREAE 125
Score = 67.7 bits (158), Expect = 7e-12
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDS 249
M+EIIN+QVG CGNQIG KFWE IS+EHG+ G Y GD+
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN 40
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 581 VNRIREEYPDRIILTFSVFPSPRVSD 658
++++REEY D+ + T S+ PS +VSD
Sbjct: 152 ISKLREEYSDKTLSTCSIIPSAKVSD 177
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 89.0 bits (211), Expect = 3e-18
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Frame = +3
Query: 234 LPRRLRPQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQN 413
+P + + E ++++ +G+YVPR++ +DL+P +D +R+G + LF P+ + G+
Sbjct: 36 MPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKE 95
Query: 414 CAANNWAKGHYTEGVEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRY 572
AANN+A+GHYT G E++++ LD IRR A+ ++ F T + + R
Sbjct: 96 DAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
Query: 573 ATS*TGYAKSIPTELY*PFQSFQVPECRICVVEPYNTTL 689
+ Y K E F + P+ VVEPYN+ L
Sbjct: 156 SVD---YGKKSKLE----FSIYPAPQVSTAVVEPYNSIL 187
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE+I++ VG G QIG WE+ EHGI P G S ++G + TT
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQS--TNEGESFTT 49
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 89.0 bits (211), Expect = 3e-18
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 7/159 (4%)
Frame = +3
Query: 234 LPRRLRPQLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQN 413
+P + + E ++++ +G+YVPR++ +DL+P +D +R+G + LF P+ + G+
Sbjct: 36 MPTQSTNEGESFTTFFSDTGSGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKE 95
Query: 414 CAANNWAKGHYTEGVEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRY 572
AANN+A+GHYT G E++++ LD IRR A+ ++ F T + + R
Sbjct: 96 DAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERL 155
Query: 573 ATS*TGYAKSIPTELY*PFQSFQVPECRICVVEPYNTTL 689
+ Y K E F + P+ VVEPYN+ L
Sbjct: 156 SVD---YGKKSKLE----FSIYPAPQVSTAVVEPYNSIL 187
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE+I++ VG G QIG WE+ EHGI P G S ++G + TT
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQS--TNEGESFTT 49
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 87.8 bits (208), Expect = 6e-18
Identities = 34/81 (41%), Positives = 57/81 (70%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ + +++E+ GK+VPR + +DL+P +D +R+G +G LF PD + G+ AANN+A+G
Sbjct: 50 QSLQAFFSESMNGKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G E+++ LD IR++ E
Sbjct: 110 HYTIGKELIDVVLDRIRKQTE 130
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSG 231
RE +++ +G G QIG WE+ EHG+D +G
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAG 38
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 87.4 bits (207), Expect = 9e-18
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ + +++E +G++VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 441 HYTEGVEILESALDVIRREA------EGWIAC-KFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IRR A +G++ F T + + R + Y K
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD---YGK 163
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 164 KAKLE----FSIYPAPQVSTAVVEPYNSIL 189
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE+I++ +G G QIG WE+ EHGI P G D L + +T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 87.4 bits (207), Expect = 9e-18
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ + +++E +G++VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 46 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Query: 441 HYTEGVEILESALDVIRREA------EGWIAC-KFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IRR A +G++ F T + + R + Y K
Sbjct: 106 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD---YGK 162
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 163 KAKLE----FSIYPAPQVSTAVVEPYNSIL 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
RE+I++ +G G QIG WE+ EHGI P G D L + +T
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 50
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 87.4 bits (207), Expect = 9e-18
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ + +++E +G++VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 441 HYTEGVEILESALDVIRREA------EGWIAC-KFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IRR A +G++ F T + + R + Y K
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD---YGK 163
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 164 KAKLE----FSIYPAPQVSTAVVEPYNSIL 189
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE+I++ +G G QIG WE+ EHGI P G D L + +T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 87.4 bits (207), Expect = 9e-18
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ + +++E +G++VPR V++DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 47 DSFSTFFSETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Query: 441 HYTEGVEILESALDVIRREA------EGWIAC-KFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G EI++ LD IRR A +G++ F T + + R + Y K
Sbjct: 107 HYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVD---YGK 163
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 164 KAKLE----FSIYPAPQVSTAVVEPYNSIL 189
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MRE+I++ +G G QIG WE+ EHGI P G D L + +T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 87.0 bits (206), Expect = 1e-17
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
E ++++ G+YVPR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 45 ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 441 HYTEGVEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G E++++ LD IRR A+ ++ F T + + R + Y K
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD---YGK 161
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 162 KSKLE----FSIYPAPQVSTAVVEPYNSIL 187
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTTTRHRLGN 303
MRE+I++ VG G QIG WE+ EHGI P G SD + G + TT GN
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSDQQADGESFTTFFSDTGN 56
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 86.2 bits (204), Expect = 2e-17
Identities = 34/81 (41%), Positives = 56/81 (69%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
+ N +++E AGK+VPR +++DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 52 DSFNTFFSETMAGKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Query: 441 HYTEGVEILESALDVIRREAE 503
HYT G EI++ +D +RR E
Sbjct: 112 HYTIGKEIIDVVMDRVRRLVE 132
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +1
Query: 124 NKMREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDL 255
N+ RE+I++ VG G Q+G WE+ EHGI P G + + L
Sbjct: 4 NRSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSL 47
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 86.2 bits (204), Expect = 2e-17
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKG 440
E ++++ G+YVPR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+G
Sbjct: 45 ESFTTFFSDTGNGRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Query: 441 HYTEGVEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRYATS*TGYAK 599
HYT G E++++ LD IRR A+ ++ F T + + R + Y K
Sbjct: 105 HYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD---YGK 161
Query: 600 SIPTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 162 KSKLE----FSIYPAPQVCTAVVEPYNSIL 187
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/58 (43%), Positives = 31/58 (53%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTTTRHRLGN 303
MRE+I++ VG G QIG WE+ EHGI P G SD + G + TT GN
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSDQQADGESFTTFFSDTGN 56
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.0 bits (201), Expect = 5e-17
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Frame = +3
Query: 276 YYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEG 455
++++ G+YVPR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 456 VEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
E++++ LD IRR A+ ++ F T + + R + Y K E
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD---YGKKSKLE 166
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
F + P+ VVEPYN+ L
Sbjct: 167 ----FSIYPAPQVSTAVVEPYNSIL 187
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTTTRHRLGN 303
MRE+I++ VG G QIG WE+ EHGI P G S+ ++G + TT GN
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSEQQNEGGSFTTFFSDTGN 56
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 85.0 bits (201), Expect = 5e-17
Identities = 47/145 (32%), Positives = 78/145 (53%), Gaps = 7/145 (4%)
Frame = +3
Query: 276 YYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYTEG 455
++++ G+YVPR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHYT G
Sbjct: 50 FFSDTGNGRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVG 109
Query: 456 VEILESALDVIRREAEG-------WIACKFSDVTLARWRYRFRIRYATS*TGYAKSIPTE 614
E++++ LD IRR A+ ++ F T + + R + Y K E
Sbjct: 110 KELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVD---YGKKSKLE 166
Query: 615 LY*PFQSFQVPECRICVVEPYNTTL 689
F + P+ VVEPYN+ L
Sbjct: 167 ----FSIYPAPQVSTAVVEPYNSIL 187
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTTTRHRLGN 303
MRE+I++ VG G QIG WE+ EHGI P G S+ ++G + TT GN
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTM--PSEQQNEGGSFTTFFSDTGN 56
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 84.6 bits (200), Expect = 6e-17
Identities = 33/78 (42%), Positives = 54/78 (69%)
Frame = +3
Query: 270 NVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHYT 449
N +++E +GK+VPR + +DL+P +D VR+G + LF P+ + G+ AANN+A+GHYT
Sbjct: 50 NTFFSETPSGKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYT 109
Query: 450 EGVEILESALDVIRREAE 503
G E+++ +D +RR E
Sbjct: 110 IGKELIDVVMDRVRRLTE 127
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSKGSTCTT 282
MREI+++ +G G QIG WE+ EHGI P G D+ + + T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNT 51
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 84.2 bits (199), Expect = 8e-17
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Frame = +3
Query: 267 INVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWAKGHY 446
+ ++++ G++VPR++ +DL+P +D +R+G + LF P+ + G+ AANN+A+GHY
Sbjct: 46 LGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHY 105
Query: 447 TEGVEILESALDVIRREA---EG----WIACKFSDVTLARWRYRFRIRYATS*TGYAKSI 605
T G EI+++ LD IRR A EG ++ F T + + R + Y K
Sbjct: 106 TVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAE---YGKKS 162
Query: 606 PTELY*PFQSFQVPECRICVVEPYNTTL 689
E F + P+ VVEPYN+ L
Sbjct: 163 KLE----FSIYPAPQISTSVVEPYNSIL 186
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 130 MREIINLQVGSCGNQIGGKFWEVISDEHGIDPSG 231
MRE+I++ VG G QIG WE+ EHGI P G
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG 34
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
+ E IN ++ E + GK+VPR + +DL+P +D VR+G + LF P+ + G+ AAN +A
Sbjct: 51 ETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYA 110
Query: 435 KGHYTEGVEILESALDVIRREAE------GWIAC-KFSDVTLARWRYRFRIRYATS*TGY 593
+G YT G E+++ +D ++R AE G++ F T + + R +T Y
Sbjct: 111 RGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTE---Y 167
Query: 594 AKSIPTELY*PFQSFQVPECRICVVEPYNTTL 689
K E F + P+ +VEPYN+ L
Sbjct: 168 GKKPKLE----FAIYPAPQVSTSMVEPYNSIL 195
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +1
Query: 133 REIINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSD 252
RE+I++ VG G QIG WE+ EHGI P G YH + D
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDG-YHVEDD 46
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Frame = +3
Query: 255 QLERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNFVYGQNCAANNWA 434
+ E IN ++ E + GK+VPR + +DL+P +D VR+G + LF P+ + G+ AAN +A
Sbjct: 23 ETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYA 82
Query: 435 KGHYTEGVEILESALDVIRREAE------GWIAC-KFSDVTLARWRYRFRIRYATS*TGY 593
+G YT G E+++ +D ++R AE G++ F T + + R +T Y
Sbjct: 83 RGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTE---Y 139
Query: 594 AKSIPTELY*PFQSFQVPECRICVVEPYNTTL 689
K E F + P+ +VEPYN+ L
Sbjct: 140 GKKPKLE----FAIYPAPQVSTSMVEPYNSIL 167
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGP-FGCLFRPDNFVYGQN--CAANNW 431
++ ++ + +A YVPR VL+DL+P ++ + P F LF DN + A NNW
Sbjct: 47 DKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNW 106
Query: 432 AKGHYTEGVEILESALDVIRREAE 503
A G Y +G E+ E +D+I REAE
Sbjct: 107 ASG-YCQGQEVQEKIMDIIIREAE 129
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 139 IINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSK 264
++ + VG CGNQ+ FW+ + DEHGI+ G + D+N K
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDK 48
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +3
Query: 261 ERINVYYNEASAGKYVPRTVLIDLKPATMDAVRSGP-FGCLFRPDNFVYGQN--CAANNW 431
++ ++ + +A YVPR VL+DL+P ++ + P F LF DN + A NNW
Sbjct: 47 DKKDLLFYQADDDHYVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNW 106
Query: 432 AKGHYTEGVEILESALDVIRREAE 503
A G Y +G E+ E +D+I REAE
Sbjct: 107 ASG-YCQGQEVQEKIMDIIIREAE 129
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 139 IINLQVGSCGNQIGGKFWEVISDEHGIDPSGCYHGDSDLNSK 264
++ + VG CGNQ+ FW+ + DEHGI+ G + D+N K
Sbjct: 7 LMTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDK 48
>AF038606-7|AAB92021.1| 344|Caenorhabditis elegans Hypothetical
protein C04C3.6 protein.
Length = 344
Score = 32.7 bits (71), Expect = 0.26
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = -3
Query: 452 FSVVSLR-PVVGR---TVLSVDEIVRSE*ASEGSRPHRVHRGRLQVDKNRARNIFPSRCL 285
FSV+ +R P + T++S DEIV E E S VH+ ++ +D R RN RCL
Sbjct: 215 FSVLIMRNPCTSKNAFTLISADEIVHHESTDEKSPLKIVHKSKIMLDIRR-RNDAIRRCL 273
Query: 284 VVVHV 270
++ V
Sbjct: 274 LLATV 278
>Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical
protein F07A5.2 protein.
Length = 310
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Frame = +1
Query: 235 YHGDSDLN--SKGSTCTTTRHRLGNMFLARFLST*SRPR-WTR*GRDPSDAY----SDRT 393
Y G+SD S G+T +++R + FL+ S+ SRPR ++ R S + S+R+
Sbjct: 27 YDGESDSTFVSTGTTPSSSRRSRLDSFLSTTSSSKSRPRIKSKLPRSSSSGFSGTGSERS 86
Query: 394 ISSTDKTVRPTTGRRD 441
ISS + T+G R+
Sbjct: 87 ISSKRSKIGNTSGNRN 102
>U41992-5|AAA83356.1| 549|Caenorhabditis elegans Hypothetical
protein F32E10.5 protein.
Length = 549
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 368 GSRPHRVHRGRLQVDKNRARNI-FPSRCLVVVHVDPFEL 255
G+ HR+ RG++ +N RNI + +RC + +PF++
Sbjct: 193 GAVIHRMDRGKVDQFQNMIRNIDYLARCQITTCTEPFQI 231
>AF024496-2|AAB70340.1| 1459|Caenorhabditis elegans Hypothetical
protein ZC178.2 protein.
Length = 1459
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 206 TSTASIQADATTATPTSTRKDQRVLQRGIGWEICSSHGSYRLEAGHD 346
TST ++ +D+TTA P+ST + + E +S G++ + +D
Sbjct: 720 TSTMTVSSDSTTAGPSSTATNSASSETPCNSETQTSDGTFTMTVPND 766
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 206 TSTASIQADATTATPTSTRKDQRVLQRGIGWEICSSHGSYRLEAGHD 346
TST ++ D+TTA P+ST + + E +S G++ + +D
Sbjct: 796 TSTMTVSNDSTTAGPSSTATNSASSETPCNSETQTSDGTFTMTVPND 842
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 206 TSTASIQADATTATPTSTRKDQRVLQRGIGWEICSSHGSYRLEAGHD 346
TST ++ +D+TT P+ST + + E +S G++ + D
Sbjct: 454 TSTMTVSSDSTTPGPSSTATNSASSETPCNSETQTSDGTFTMTVSSD 500
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 206 TSTASIQADATTATPTSTRKDQRVLQRGIGWEICSSHGSYRLEAGHD 346
TST ++ +D+TTA P+ST + + E +S G+ + D
Sbjct: 644 TSTMTVSSDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVSSD 690
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 206 TSTASIQADATTATPTSTRKDQRVLQRGIGWEICSSHGSYRLEAGHD 346
TST ++ +D+TTA P+ST + + E +S G+ + D
Sbjct: 682 TSTMTVSSDSTTAGPSSTATNSASSETPCNSETQTSDGTSTMTVSSD 728
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 149 SRSVLVETKSAESSGR*YLTSTASI 223
SRS LV ++S E S R Y+T T+S+
Sbjct: 13 SRSALVRSRSVEPSSRLYVTRTSSV 37
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 300 KYVPRTVLIDLKPATMDAVRSGPFGCLFRPDNF 398
KY P T L+DL+P + AV + F +F F
Sbjct: 1287 KYPPPTELLDLQPLPISAVTNKEFQTVFAESGF 1319
>U42839-4|AAM54197.1| 114|Caenorhabditis elegans Hypothetical
protein F11C7.7 protein.
Length = 114
Score = 27.9 bits (59), Expect = 7.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 447 CSVPSPSCWPHSFVRRRNCP 388
C PSPSC PH++ + + P
Sbjct: 86 CMAPSPSCCPHTYKKTVDIP 105
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 296 WEICSSHGSYRLEAGHDGRGEV 361
W + +S+GSYR G GR E+
Sbjct: 290 WSVANSYGSYRQMTGTHGRPEI 311
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 296 WEICSSHGSYRLEAGHDGRGEV 361
W + +S+GSYR G GR E+
Sbjct: 553 WSVANSYGSYRQMTGTHGRPEI 574
>Z73098-2|CAA97331.2| 1058|Caenorhabditis elegans Hypothetical
protein T21C9.2 protein.
Length = 1058
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 432 AKGHYTEGVEILESALDVIRREAEGWIAC 518
++G Y + +E +E++LDV+ +E G + C
Sbjct: 407 SQGDYPKAIECIETSLDVLSKELNG-VTC 434
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,427
Number of Sequences: 27780
Number of extensions: 323314
Number of successful extensions: 1051
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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