Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30122.Seq
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 105 7e-23
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 105 7e-23
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 105 7e-23
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 50 4e-06
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 45 1e-04
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 45 1e-04
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 45 1e-04
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 45 1e-04
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 45 1e-04
AY060836-1|AAL28384.1| 240|Drosophila melanogaster GM01918p pro... 30 3.3
AE014298-1264|AAF46438.1| 240|Drosophila melanogaster CG7041-PA... 30 3.3
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 105 bits (251), Expect = 7e-23
Identities = 56/92 (60%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +1
Query: 355 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*V 534
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WGYPNLKSVREL+ V
Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIY---KRGFV 150
Query: 535 DNVYQSLPT----ALLRRGFHKHNIICVEDLI 618
+ Q +P + R+ H I CVEDL+
Sbjct: 151 KHNRQRVPITDNFVIERKLRQAHQIQCVEDLV 182
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +2
Query: 287 YYVPGEAKLAFVIRIRGINQVSPK 358
+YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 71 FYVPAEAKLAFVVRIRGINKVAPK 94
Score = 35.1 bits (77), Expect = 0.087
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +3
Query: 78 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 254
LPAVPES LK + LK+ + +K+E RAE+Y EY E+ EI
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREI 59
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 620 HEIFTVGEKFKYASNF 667
HEIFTVG FKYASNF
Sbjct: 183 HEIFTVGPNFKYASNF 198
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 105 bits (251), Expect = 7e-23
Identities = 56/92 (60%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +1
Query: 355 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*V 534
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WGYPNLKSVREL+ V
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIY---KRGFV 163
Query: 535 DNVYQSLPT----ALLRRGFHKHNIICVEDLI 618
+ Q +P + R+ H I CVEDL+
Sbjct: 164 KHNRQRVPITDNFVIERKLRQAHQIQCVEDLV 195
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +2
Query: 287 YYVPGEAKLAFVIRIRGINQVSPK 358
+YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 84 FYVPAEAKLAFVVRIRGINKVAPK 107
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 48 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 227
PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 228 YRIKERDEI 254
Y E+ EI
Sbjct: 64 YIKAEQREI 72
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 620 HEIFTVGEKFKYASNF 667
HEIFTVG FKYASNF
Sbjct: 196 HEIFTVGPNFKYASNF 211
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 105 bits (251), Expect = 7e-23
Identities = 56/92 (60%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +1
Query: 355 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*V 534
+VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI WGYPNLKSVREL+ V
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIY---KRGFV 163
Query: 535 DNVYQSLPT----ALLRRGFHKHNIICVEDLI 618
+ Q +P + R+ H I CVEDL+
Sbjct: 164 KHNRQRVPITDNFVIERKLRQAHQIQCVEDLV 195
Score = 46.0 bits (104), Expect = 5e-05
Identities = 19/24 (79%), Positives = 23/24 (95%)
Frame = +2
Query: 287 YYVPGEAKLAFVIRIRGINQVSPK 358
+YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 84 FYVPAEAKLAFVVRIRGINKVAPK 107
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/69 (39%), Positives = 35/69 (50%)
Frame = +3
Query: 48 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 227
PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 228 YRIKERDEI 254
Y E+ EI
Sbjct: 64 YIKAEQREI 72
Score = 34.3 bits (75), Expect = 0.15
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 620 HEIFTVGEKFKYASNF 667
HEIFTVG FKYASNF
Sbjct: 196 HEIFTVGPNFKYASNF 211
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 49.6 bits (113), Expect = 4e-06
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = -1
Query: 483 VGVSPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 352
+G++P +V LGD H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 48 IGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 31.5 bits (68), Expect = 1.1
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 349 NLVDTTDSDDKCQFGFPGNVVVATI 275
+LVDT D+DDK QFG G+V + +
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVAL 117
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 367 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*VDNVY 546
+ + R+ +N VF+ K +LR+ EP++ +G P+L S+RELV +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFAR-IDGKK 174
Query: 547 QSLPT-ALLRRGFHKHNIICVEDLI 618
++ + ++ + +IC+ED+I
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLEDII 199
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 367 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*VDNVY 546
+ + R+ +N VF+ K +LR+ EP++ +G P+L S+RELV +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFAR-IDGKK 174
Query: 547 QSLPT-ALLRRGFHKHNIICVEDLI 618
++ + ++ + +IC+ED+I
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLEDII 199
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 367 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*VDNVY 546
+ + R+ +N VF+ K +LR+ EP++ +G P+L S+RELV +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFAR-IDGKK 174
Query: 547 QSLPT-ALLRRGFHKHNIICVEDLI 618
++ + ++ + +IC+ED+I
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLEDII 199
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 367 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*VDNVY 546
+ + R+ +N VF+ K +LR+ EP++ +G P+L S+RELV +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFAR-IDGKK 174
Query: 547 QSLPT-ALLRRGFHKHNIICVEDLI 618
++ + ++ + +IC+ED+I
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLEDII 199
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 367 VLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWGYPNLKSVRELVSNVDSPS*VDNVY 546
+ + R+ +N VF+ K +LR+ EP++ +G P+L S+RELV +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSLSSIRELVFKKGFAR-IDGKK 174
Query: 547 QSLPT-ALLRRGFHKHNIICVEDLI 618
++ + ++ + +IC+ED+I
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLEDII 199
>AY060836-1|AAL28384.1| 240|Drosophila melanogaster GM01918p
protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 421 NKATVNMLRIAEPYIAW-GYPNLKSVRELVSNVDSPS*VDNVYQSL 555
+K TVN E Y+ W GYP ++ E V N+D P + N +SL
Sbjct: 11 DKRTVNGR--TEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESL 54
>AE014298-1264|AAF46438.1| 240|Drosophila melanogaster CG7041-PA
protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 421 NKATVNMLRIAEPYIAW-GYPNLKSVRELVSNVDSPS*VDNVYQSL 555
+K TVN E Y+ W GYP ++ E V N+D P + N +SL
Sbjct: 11 DKRTVNGR--TEYYLKWKGYPRSENTWEPVENLDCPDLIANFEESL 54
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,348,399
Number of Sequences: 53049
Number of extensions: 555890
Number of successful extensions: 1228
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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