Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30119.Seq
(448 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 155 3e-37
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 128 7e-29
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 120 1e-26
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 119 3e-26
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 107 1e-22
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 103 2e-21
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 101 9e-21
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 87 2e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 85 5e-16
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 85 9e-16
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 80 2e-14
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 71 2e-11
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 70 2e-11
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 60 2e-08
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 54 1e-06
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 54 2e-06
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 52 4e-06
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 49 4e-05
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 49 4e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 48 1e-04
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 47 2e-04
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 46 4e-04
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 45 7e-04
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 44 0.002
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 43 0.003
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 42 0.005
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.019
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 38 0.13
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 36 0.53
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 35 0.70
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 33 2.1
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 2.8
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 33 2.8
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 3.7
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 32 6.5
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 155 bits (377), Expect = 3e-37
Identities = 72/78 (92%), Positives = 74/78 (94%)
Frame = +3
Query: 42 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 222 VDTRLNKFLWSRGSEMFP 275
VDTRLNKFLWS+G P
Sbjct: 61 VDTRLNKFLWSKGVRNVP 78
Score = 72.9 bits (171), Expect = 3e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 412
NDDEDSAHKLFTLVTYVPVASIKGLQTENVDAS E
Sbjct: 90 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 128 bits (308), Expect = 7e-29
Identities = 57/78 (73%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Frame = +3
Query: 45 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 222 VDTRLNKFLWSRGSEMFP 275
+DTRLNK +W++G P
Sbjct: 64 IDTRLNKAVWAKGIRNVP 81
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93 NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 120 bits (289), Expect = 1e-26
Identities = 54/78 (69%), Positives = 65/78 (83%)
Frame = +3
Query: 42 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 222 VDTRLNKFLWSRGSEMFP 275
+DTRLNK +WS+G P
Sbjct: 61 IDTRLNKHIWSKGIRSTP 78
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 412
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 119 bits (286), Expect = 3e-26
Identities = 54/73 (73%), Positives = 64/73 (87%)
Frame = +3
Query: 42 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 221
MAK K E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 222 VDTRLNKFLWSRG 260
+DTRLNK LW RG
Sbjct: 61 IDTRLNKALWHRG 73
Score = 54.4 bits (125), Expect = 1e-06
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASHE 412
NDDEDS +KL+TLVTYVPV++ K LQTENV+++ +
Sbjct: 90 NDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 107 bits (256), Expect = 1e-22
Identities = 44/60 (73%), Positives = 54/60 (90%)
Frame = +3
Query: 96 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W++G P
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVP 119
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 103 bits (246), Expect = 2e-21
Identities = 46/76 (60%), Positives = 60/76 (78%)
Frame = +3
Query: 48 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 227
K + +K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D
Sbjct: 55 KSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLD 114
Query: 228 TRLNKFLWSRGSEMFP 275
+LN+ +W G + FP
Sbjct: 115 PKLNQEVWKYGVKNFP 130
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 101 bits (241), Expect = 9e-21
Identities = 45/67 (67%), Positives = 56/67 (83%)
Frame = +3
Query: 60 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 239
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 240 KFLWSRG 260
K +WS+G
Sbjct: 61 KQIWSKG 67
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 87.0 bits (206), Expect = 2e-16
Identities = 45/73 (61%), Positives = 55/73 (75%)
Frame = +3
Query: 45 AKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 224
AK G++KG SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 225 DTRLNKFLWSRGS 263
T LN L+ R S
Sbjct: 64 CT-LNS-LFHRSS 74
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 85.4 bits (202), Expect = 5e-16
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +3
Query: 60 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 227
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 84.6 bits (200), Expect = 9e-16
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 93 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMF 272
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W++G+
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 273 PPVSV*GFHEDVMMMKI 323
V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 31.9 bits (69), Expect = 6.5
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 329 HKLFTLVTYVPVASIKGL 382
HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 80.2 bits (189), Expect = 2e-14
Identities = 34/56 (60%), Positives = 42/56 (75%)
Frame = +3
Query: 108 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G P
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIP 67
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/76 (47%), Positives = 48/76 (63%)
Frame = +3
Query: 33 KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 212
K+ KP E K K +TRE T+++HK LH FKKRAP+AIK IR A K M T
Sbjct: 28 KVGNKKPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85
Query: 213 DIRVDTRLNKFLWSRG 260
+++ D LN+F+WS+G
Sbjct: 86 NVKFDMGLNQFIWSQG 101
Score = 35.5 bits (78), Expect = 0.53
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 317 EDSAHKLFTLVTYVPVASIKGLQTENVD 400
E K +TLV+YVPVAS KGL T+ V+
Sbjct: 119 EGEEGKFYTLVSYVPVASFKGLVTKTVE 146
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +3
Query: 96 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRG 260
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF+WS+G
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSKG 93
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTE 391
N+DEDS +++TLV +V V S KGL E
Sbjct: 110 NEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 60.5 bits (140), Expect = 2e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 147 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W++G P
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVP 131
Score = 51.2 bits (117), Expect = 1e-05
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 143 NEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/50 (62%), Positives = 34/50 (68%)
Frame = -1
Query: 238 FKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVTT 89
F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVTT
Sbjct: 28 FNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVTT 77
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 54.4 bits (125), Expect = 1e-06
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 87 EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSE 266
+ V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W +G +
Sbjct: 82 DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVK 141
Query: 267 MFP 275
P
Sbjct: 142 GVP 144
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 165 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
A IRKFA K+MGTPD+R+DTRLNK +WS+G P
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVP 47
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 308 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 400
N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 59 NEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 52.4 bits (120), Expect = 4e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 93 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMF 272
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WSRG
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 273 P 275
P
Sbjct: 63 P 63
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 49.2 bits (112), Expect = 4e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +3
Query: 141 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRG 260
GF++ P +KEIRKFA K+MGTPD+ +D NK + + G
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEG 88
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 49.2 bits (112), Expect = 4e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +3
Query: 99 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFPP 278
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W RG + PP
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQK-PP 67
Query: 279 VSV 287
V
Sbjct: 68 ARV 70
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 47.6 bits (108), Expect = 1e-04
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3
Query: 114 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S GS P
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPP 68
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 46.8 bits (106), Expect = 2e-04
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +3
Query: 69 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 242
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
Query: 243 FLWSRGSEMFPPVSV 287
LW +G E PP+S+
Sbjct: 62 CLWEKGCEK-PPLSI 75
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 46.0 bits (104), Expect = 4e-04
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +3
Query: 102 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
EYTVNL K + KR +A+K +++F + +++ LNKF+W RG P
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 45.2 bits (102), Expect = 7e-04
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSRGSEMFPP 278
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS GS PP
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWS-GSITKPP 67
Query: 279 VSV 287
V
Sbjct: 68 ARV 70
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 43.6 bits (98), Expect = 0.002
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 90 VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSRGS 263
VV R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W RG+
Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64
Query: 264 EMFPPVSV 287
E PP +
Sbjct: 65 EK-PPTKI 71
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +3
Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFPPVS 284
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WSR E PP
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREK-PPAR 66
Query: 285 V 287
V
Sbjct: 67 V 67
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +3
Query: 105 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W RG E P
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPP 67
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 40.3 bits (90), Expect = 0.019
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3
Query: 84 NEVVTREYTVNLHKRLHG 137
+EVVTREYT+NLHKRLHG
Sbjct: 13 DEVVTREYTINLHKRLHG 30
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 37.5 bits (83), Expect = 0.13
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 99 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W RG + P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 35.5 bits (78), Expect = 0.53
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 93 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSRGSEM 269
+TR V KR++ RA RA++ IRK+ + + I +D +N+++WSR E
Sbjct: 7 ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66
Query: 270 FP 275
P
Sbjct: 67 PP 68
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 35.1 bits (77), Expect = 0.70
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 75 SAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLW 251
S I E T E TVNL + + + K+A + ++ +++ +K + V LN FL+
Sbjct: 3 SKIEENQTVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLY 62
Query: 252 SRGSEMFP 275
SRG + P
Sbjct: 63 SRGIKKIP 70
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 33.5 bits (73), Expect = 2.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 147 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSRGSEMFP 275
KKR + + A K M T D+R+D LN+ +W+RG P
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLP 328
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 2.8
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 314 DEDSAHKLFTLVTYVPVASIKGLQTENV 397
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 33.1 bits (72), Expect = 2.8
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 27 KLKITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQM 203
+LK + +P G G AI VT + LH L G+G+ R A A+ + AE
Sbjct: 126 ELKDRLGEPLGT--GGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAG 183
Query: 204 GTPDI 218
GTP +
Sbjct: 184 GTPQV 188
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 3.7
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 105 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 254
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 31.9 bits (69), Expect = 6.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 201 MGTPDIRVDTRLNKFLWSRG 260
M T D+R+D +LNK +WS+G
Sbjct: 1 MKTSDVRIDVKLNKAVWSKG 20
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,639,478
Number of Sequences: 1657284
Number of extensions: 7174916
Number of successful extensions: 14300
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14297
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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