Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30117.Seq
(608 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-... 152 7e-36
UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4; ... 141 1e-32
UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4; Endopterygot... 116 3e-25
UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular orga... 116 4e-25
UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular o... 107 2e-22
UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhanc... 106 5e-22
UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: ... 106 5e-22
UniRef50_O46173 Cluster: Y-box protein; n=5; cellular organisms|... 105 6e-22
UniRef50_P67809 Cluster: Nuclease sensitive element-binding prot... 105 6e-22
UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box prot... 104 1e-21
UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona intesti... 104 1e-21
UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias... 102 6e-21
UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21; Tetrapod... 102 6e-21
UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius auratus... 101 1e-20
UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular org... 100 2e-20
UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box fact... 100 5e-20
UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ ce... 90 4e-17
UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;... 88 1e-16
UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n... 86 5e-16
UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n... 76 6e-13
UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box ... 70 5e-11
UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia japo... 63 6e-09
UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1; ... 62 8e-09
UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis el... 61 2e-08
UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;... 60 3e-08
UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep: MG... 57 4e-07
UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus laev... 50 4e-05
UniRef50_UPI000155640A Cluster: PREDICTED: hypothetical protein;... 48 1e-04
UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n... 48 2e-04
UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep: ... 48 2e-04
UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB... 45 0.001
UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona intesti... 45 0.001
UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triti... 44 0.002
UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus lu... 44 0.002
UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.002
UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2; ... 43 0.007
UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome s... 41 0.026
UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein; ... 40 0.046
UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12; Bacteria... 40 0.046
UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1; Ostre... 39 0.11
UniRef50_O65639 Cluster: Glycine-rich protein; n=8; Magnoliophyt... 39 0.11
UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2; Acti... 38 0.25
UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain ... 38 0.25
UniRef50_UPI0000589074 Cluster: PREDICTED: similar to ENSANGP000... 37 0.33
UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6; c... 37 0.33
UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein; ... 37 0.33
UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.33
UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2; Thei... 37 0.33
UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n... 37 0.43
UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3; ... 37 0.43
UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=... 36 0.57
UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1; ma... 36 0.57
UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular... 36 0.57
UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3; Gammaproteobac... 36 0.75
UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1; ... 36 0.75
UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:... 36 0.99
UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein; ... 36 0.99
UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154; Ba... 36 0.99
UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein; ... 35 1.3
UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB... 35 1.3
UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep: AG... 35 1.3
UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2; ... 35 1.3
UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2; M... 35 1.3
UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7; Bact... 35 1.3
UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78; B... 35 1.7
UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2; C... 35 1.7
UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n... 35 1.7
UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28; Bac... 35 1.7
UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39; Gammapro... 35 1.7
UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:... 34 2.3
UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep: ... 34 2.3
UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6; Streptoc... 34 2.3
UniRef50_P39158 Cluster: Cold shock protein cspC; n=41; Bacteria... 34 2.3
UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26; cel... 34 2.3
UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2; Bacteria... 34 3.0
UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp. M... 34 3.0
UniRef50_A7ENM1 Cluster: Putative uncharacterized protein; n=1; ... 34 3.0
UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38; Gam... 34 3.0
UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59; Alphapro... 34 3.0
UniRef50_P72188 Cluster: Cold shock protein capA; n=23; Proteoba... 34 3.0
UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep... 33 4.0
UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44; Bacteria... 33 4.0
UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein; ... 33 4.0
UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 - Brad... 33 5.3
UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2; Bacteroi... 33 5.3
UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein; ... 33 5.3
UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5; Deinoc... 33 5.3
UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24... 33 7.0
UniRef50_Q89KY2 Cluster: Bll4766 protein; n=5; Bradyrhizobiaceae... 33 7.0
UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA - Myxoco... 33 7.0
UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain ... 33 7.0
UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367; ro... 33 7.0
UniRef50_UPI0000DA19CE Cluster: PREDICTED: similar to nuclease s... 32 9.3
UniRef50_Q4KIT8 Cluster: Membrane protein, putative; n=1; Pseudo... 32 9.3
UniRef50_Q8D046 Cluster: Cold shock protein; n=14; Enterobacteri... 32 9.3
UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1; C... 32 9.3
UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein; ... 32 9.3
UniRef50_Q5ENQ3 Cluster: Chloroplast lipoate protein ligase; n=1... 32 9.3
UniRef50_A3EXS4 Cluster: RNA-binding protein LIN-28-like protein... 32 9.3
>UniRef50_A2A246 Cluster: Y-box protein; n=2; Bombyx mori|Rep: Y-box
protein - Bombyx mori (Silk moth)
Length = 272
Score = 152 bits (368), Expect = 7e-36
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA
Sbjct: 60 KEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 119
Query: 432 DKRRGYHRQYF 464
DKRRGYHRQYF
Sbjct: 120 DKRRGYHRQYF 130
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIAEKVSGTVKWFNVKSGYGFINRNDTK+
Sbjct: 33 VIAEKVSGTVKWFNVKSGYGFINRNDTKE 61
>UniRef50_Q5MGM1 Cluster: Putative uncharacterized protein; n=4;
cellular organisms|Rep: Putative uncharacterized protein
- Lonomia obliqua (Moth)
Length = 254
Score = 141 bits (342), Expect = 1e-32
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI RNNPRKAVRSVGDGE VEFAVVAGEKG EAAGVTGPGGEPVKGSPYAA
Sbjct: 51 KEDVFVHQTAIIRNNPRKAVRSVGDGEVVEFAVVAGEKGCEAAGVTGPGGEPVKGSPYAA 110
Query: 432 DKRRGYHRQYF 464
DKRRGY+RQY+
Sbjct: 111 DKRRGYYRQYY 121
Score = 64.1 bits (149), Expect = 2e-09
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIAEKVSGTVKWFNVKSGYGFINRNDTK+
Sbjct: 24 VIAEKVSGTVKWFNVKSGYGFINRNDTKE 52
>UniRef50_Q8IT93 Cluster: Y-box protein Ct-p50; n=4;
Endopterygota|Rep: Y-box protein Ct-p50 - Chironomus
tentans (Midge)
Length = 317
Score = 116 bits (280), Expect = 3e-25
Identities = 53/66 (80%), Positives = 60/66 (90%)
Frame = +3
Query: 249 HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 428
+++D+FVHQ+AI +NNP+KAVRSVGDGE VEF VVAGEKG EAA VTGP GEPVKGSPYA
Sbjct: 51 NKQDIFVHQSAIIKNNPKKAVRSVGDGEVVEFDVVAGEKGSEAANVTGPEGEPVKGSPYA 110
Query: 429 ADKRRG 446
ADKRRG
Sbjct: 111 ADKRRG 116
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
+IA KV+GTVKWFNVKSGYGFINRND K+
Sbjct: 25 IIATKVTGTVKWFNVKSGYGFINRNDNKQ 53
>UniRef50_A0NEN6 Cluster: ENSANGP00000031633; n=12; cellular
organisms|Rep: ENSANGP00000031633 - Anopheles gambiae
str. PEST
Length = 166
Score = 116 bits (279), Expect = 4e-25
Identities = 55/66 (83%), Positives = 59/66 (89%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
QEDVFVHQ+AIARNNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPVKGS YAA
Sbjct: 32 QEDVFVHQSAIARNNPKKAVRSVGDGEQVEFDVVIGEKGNEAANVTGPQGEPVKGSQYAA 91
Query: 432 DKRRGY 449
+KRRG+
Sbjct: 92 EKRRGF 97
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIA KV+G VKWFNVKSGYGFINR DT++
Sbjct: 5 VIATKVTGVVKWFNVKSGYGFINRGDTQE 33
>UniRef50_P16989 Cluster: DNA-binding protein A; n=92; cellular
organisms|Rep: DNA-binding protein A - Homo sapiens
(Human)
Length = 372
Score = 107 bits (257), Expect = 2e-22
Identities = 52/71 (73%), Positives = 58/71 (81%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 113 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 172
Query: 432 DKRRGYHRQYF 464
D+RR Y R Y+
Sbjct: 173 DRRR-YRRGYY 182
Score = 56.0 bits (129), Expect = 7e-07
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V+A KV GTVKWFNV++GYGFINRNDTK+
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKE 114
>UniRef50_Q90650 Cluster: Rous sarcoma virus transcription enhancer
factor II; n=1; Gallus gallus|Rep: Rous sarcoma virus
transcription enhancer factor II - Gallus gallus
(Chicken)
Length = 298
Score = 106 bits (254), Expect = 5e-22
Identities = 52/71 (73%), Positives = 57/71 (80%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK + SVGDGE VEF VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 110 KEDVFVHQTAIKKNNPRKYLASVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 169
Query: 432 DKRRGYHRQYF 464
D+RR Y R YF
Sbjct: 170 DRRR-YRRGYF 179
Score = 56.0 bits (129), Expect = 7e-07
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V+A KV GTVKWFNV++GYGFINRNDTK+
Sbjct: 83 VLATKVLGTVKWFNVRNGYGFINRNDTKE 111
>UniRef50_Q9XSU1 Cluster: DNA binding protein; n=3; Amniota|Rep: DNA
binding protein - Canis familiaris (Dog)
Length = 96
Score = 106 bits (254), Expect = 5e-22
Identities = 51/71 (71%), Positives = 58/71 (81%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK +RSVGDGE V+F VV GEKG EAA VTGP G PV+GS YAA
Sbjct: 15 KEDVFVHQTAIKKNNPRKYLRSVGDGETVQFDVVEGEKGAEAANVTGPDGVPVEGSRYAA 74
Query: 432 DKRRGYHRQYF 464
D+RR Y R Y+
Sbjct: 75 DRRR-YRRGYY 84
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +1
Query: 211 NVKSGYGFINRNDTKK 258
NV++GYGFINRNDTK+
Sbjct: 1 NVRNGYGFINRNDTKE 16
>UniRef50_O46173 Cluster: Y-box protein; n=5; cellular
organisms|Rep: Y-box protein - Drosophila melanogaster
(Fruit fly)
Length = 359
Score = 105 bits (253), Expect = 6e-22
Identities = 51/66 (77%), Positives = 57/66 (86%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQ+AIA NNP+KAVRSVGDGE VEF VV GEKG EAA VTGP GEPV+GS +AA
Sbjct: 85 REDVFVHQSAIA-NNPKKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPSGEPVRGSQFAA 143
Query: 432 DKRRGY 449
DKRR +
Sbjct: 144 DKRRNF 149
Score = 59.3 bits (137), Expect = 7e-08
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIA KV+GTVKWFNVKSGYGFINRNDT++
Sbjct: 58 VIATKVTGTVKWFNVKSGYGFINRNDTRE 86
>UniRef50_P67809 Cluster: Nuclease sensitive element-binding protein
1; n=65; Coelomata|Rep: Nuclease sensitive
element-binding protein 1 - Homo sapiens (Human)
Length = 324
Score = 105 bits (253), Expect = 6e-22
Identities = 51/70 (72%), Positives = 58/70 (82%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PV+GS YAA
Sbjct: 81 KEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAA 140
Query: 432 DKRRGYHRQY 461
D R ++R+Y
Sbjct: 141 D--RNHYRRY 148
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIA KV GTVKWFNV++GYGFINRNDTK+
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKE 82
>UniRef50_UPI00015B4254 Cluster: PREDICTED: similar to Y-box protein
Ct-p40; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
to Y-box protein Ct-p40 - Nasonia vitripennis
Length = 335
Score = 104 bits (250), Expect = 1e-21
Identities = 52/69 (75%), Positives = 55/69 (79%)
Frame = +3
Query: 258 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADK 437
D+FV Q I+ N P KAVRSVGDGE VEF VV GEKG EAA VTGP GE VKGSPYAADK
Sbjct: 93 DIFVCQRCISNNLPSKAVRSVGDGEVVEFDVVIGEKGNEAANVTGPDGEAVKGSPYAADK 152
Query: 438 RRGYHRQYF 464
RRGY RQY+
Sbjct: 153 RRGY-RQYY 160
Score = 51.6 bits (118), Expect = 1e-05
Identities = 21/25 (84%), Positives = 24/25 (96%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRN 246
+IA KV+GTVKWFNVKSGYGFINR+
Sbjct: 64 IIANKVTGTVKWFNVKSGYGFINRS 88
>UniRef50_Q4H2L8 Cluster: Y-box protein 1/2/3; n=2; Ciona
intestinalis|Rep: Y-box protein 1/2/3 - Ciona
intestinalis (Transparent sea squirt)
Length = 320
Score = 104 bits (250), Expect = 1e-21
Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +3
Query: 231 FHQQE*HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF-EAAGVTGPGGEP 407
F ++ ++EDVF+HQTAI +NNP+K +RSVGDGE VEF VV GEKG EAA VTGP GEP
Sbjct: 41 FVNRDDNKEDVFIHQTAIIKNNPKKYLRSVGDGENVEFDVVEGEKGLPEAANVTGPNGEP 100
Query: 408 VKGSPYAADKRRGYHRQY 461
VKGS YAAD+RR Y +Y
Sbjct: 101 VKGSKYAADRRR-YKPRY 117
Score = 48.0 bits (109), Expect = 2e-04
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V+A SG VKWFNV++GYGF+NR+D K+
Sbjct: 21 VLASHCSGVVKWFNVRNGYGFVNRDDNKE 49
>UniRef50_Q90WH1 Cluster: Cold-shock domain protein; n=1; Oryzias
latipes|Rep: Cold-shock domain protein - Oryzias latipes
(Medaka fish) (Japanese ricefish)
Length = 366
Score = 102 bits (245), Expect = 6e-21
Identities = 49/71 (69%), Positives = 57/71 (80%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK +RSVGDGE VEF V+ KG EAA VTGPGG PVKGS YA
Sbjct: 25 KEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVIEAAKGSEAANVTGPGGIPVKGSRYAP 84
Query: 432 DKRRGYHRQYF 464
+KRR + R++F
Sbjct: 85 NKRR-FRRRFF 94
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = +1
Query: 187 VSGTVKWFNVKSGYGFINRNDTKK 258
V GTVKWFNV++GYGFINRNDTK+
Sbjct: 3 VQGTVKWFNVRNGYGFINRNDTKE 26
>UniRef50_Q9Y2T7 Cluster: Y-box-binding protein 2; n=21;
Tetrapoda|Rep: Y-box-binding protein 2 - Homo sapiens
(Human)
Length = 364
Score = 102 bits (245), Expect = 6e-21
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGPGG PVKGS YA
Sbjct: 116 KEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAP 175
Query: 432 DKRR 443
++R+
Sbjct: 176 NRRK 179
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V+A +V GTVKWFNV++GYGFINRNDTK+
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKE 117
>UniRef50_O13015 Cluster: Y box protein 2; n=1; Carassius
auratus|Rep: Y box protein 2 - Carassius auratus
(Goldfish)
Length = 297
Score = 101 bits (243), Expect = 1e-20
Identities = 50/70 (71%), Positives = 54/70 (77%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK +RSVGDGE VEF VV KG EAA VTGPGG PVKGS YA
Sbjct: 43 KEDVFVHQTAIKKNNPRKFLRSVGDGEVVEFDVVEAAKGSEAANVTGPGGIPVKGSRYAP 102
Query: 432 DKRRGYHRQY 461
+KRR R Y
Sbjct: 103 NKRRFRRRFY 112
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIA V GTVKWFNV++GYGFINRNDTK+
Sbjct: 16 VIATGVEGTVKWFNVRNGYGFINRNDTKE 44
>UniRef50_P41824 Cluster: Y-box factor homolog; n=2; cellular
organisms|Rep: Y-box factor homolog - Aplysia
californica (California sea hare)
Length = 253
Score = 100 bits (240), Expect = 2e-20
Identities = 48/64 (75%), Positives = 53/64 (82%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG EAA VTGP G V+GS YAA
Sbjct: 55 KEDVFVHQTAIVKNNPRKYLRSVGDGEKVEFDVVEGEKGNEAANVTGPEGSNVQGSKYAA 114
Query: 432 DKRR 443
D+RR
Sbjct: 115 DRRR 118
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
+IA +VSGTVKWFNVKSGYGFINR+DTK+
Sbjct: 28 IIASQVSGTVKWFNVKSGYGFINRDDTKE 56
>UniRef50_UPI00005843EB Cluster: PREDICTED: similar to Y-Box factor;
n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Y-Box factor - Strongylocentrotus purpuratus
Length = 326
Score = 99.5 bits (237), Expect = 5e-20
Identities = 49/64 (76%), Positives = 51/64 (79%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQ+AI RNNPRK RSVGDGE VEF VV G KG EAA VTGP G PV GS YAA
Sbjct: 46 KEDVFVHQSAIVRNNPRKYQRSVGDGEVVEFDVVEGTKGNEAARVTGPEGAPVVGSKYAA 105
Query: 432 DKRR 443
DKRR
Sbjct: 106 DKRR 109
Score = 57.6 bits (133), Expect = 2e-07
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V+A KVSGTVKWFNVK+GYGFINR+DTK+
Sbjct: 19 VLATKVSGTVKWFNVKNGYGFINRDDTKE 47
>UniRef50_UPI00006A28C0 Cluster: Y-box-binding protein 2 (Germ
cell-specific Y-box-binding protein) (Contrin) (MSY2
homolog).; n=1; Xenopus tropicalis|Rep: Y-box-binding
protein 2 (Germ cell-specific Y-box-binding protein)
(Contrin) (MSY2 homolog). - Xenopus tropicalis
Length = 199
Score = 89.8 bits (213), Expect = 4e-17
Identities = 44/62 (70%), Positives = 48/62 (77%)
Frame = +3
Query: 276 TAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRGYHR 455
TAI RNNPRK +RSVGDGE VEF VV GEKG EAA VTGPGG PVKGS +A ++RR R
Sbjct: 70 TAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVKGSRFAPNRRRFRRR 129
Query: 456 QY 461
Y
Sbjct: 130 FY 131
>UniRef50_O62213 Cluster: Putative uncharacterized protein cey-1;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-1 - Caenorhabditis elegans
Length = 208
Score = 88.2 bits (209), Expect = 1e-16
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAAD 434
ED+FVHQTAI NNP K +RS+GD E V F +V G KG EAA VTGP G PV+GS YAAD
Sbjct: 44 EDIFVHQTAIINNNPNKYLRSLGDNEEVMFDIVEGSKGLEAASVTGPDGGPVQGSKYAAD 103
Query: 435 K 437
+
Sbjct: 104 R 104
Score = 51.6 bits (118), Expect = 1e-05
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V A KV GTVKWFNVK+GYGFINR DT +
Sbjct: 16 VKATKVKGTVKWFNVKNGYGFINRTDTNE 44
>UniRef50_UPI0000DC0B3F Cluster: UPI0000DC0B3F related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B3F UniRef100 entry -
Rattus norvegicus
Length = 292
Score = 86.2 bits (204), Expect = 5e-16
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
+EDVFVHQTA+ +N+PRK +RSVGD E VEF V GEK EAA VTG GG PV+ S Y A
Sbjct: 53 KEDVFVHQTAMKKNDPRKYLRSVGDAETVEFDFVEGEKDVEAASVTGLGGVPVQDSKYTA 112
Query: 432 DKRRGYHR 455
D+ H+
Sbjct: 113 DRNHCKHQ 120
Score = 35.5 bits (78), Expect = 0.99
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIA KV GT+K V +G G INRNDTK+
Sbjct: 26 VIATKVLGTMKCSIVWNGCGLINRNDTKE 54
>UniRef50_UPI0000DC181B Cluster: UPI0000DC181B related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC181B UniRef100 entry -
Rattus norvegicus
Length = 210
Score = 76.2 bits (179), Expect = 6e-13
Identities = 37/58 (63%), Positives = 43/58 (74%)
Frame = +3
Query: 258 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAA 431
DVFVHQTAI +NNPRK + + GD E VEF V+ GEK EAA + GPGG V+GS YAA
Sbjct: 53 DVFVHQTAIKKNNPRKYLHTTGDRETVEFDVIEGEKDAEAANIIGPGG--VQGSQYAA 108
>UniRef50_Q23960 Cluster: Y-box protein; n=2; Dugesia|Rep: Y-box
protein - Dugesia japonica (Planarian)
Length = 266
Score = 69.7 bits (163), Expect = 5e-11
Identities = 34/69 (49%), Positives = 46/69 (66%)
Frame = +3
Query: 249 HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 428
+QED+F+HQ+AI ++NP +SVG+GE + F +V G KG EAA V+ G+ VKGS YA
Sbjct: 50 NQEDIFIHQSAIVKSNPDHPRKSVGEGEEILFDIVKGAKGNEAANVSAIDGKCVKGSEYA 109
Query: 429 ADKRRGYHR 455
RG R
Sbjct: 110 LRYPRGRGR 118
Score = 41.5 bits (93), Expect = 0.015
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 187 VSGTVKWFNVKSGYGFINRNDTKK 258
++G VKWFNVK GYGF+ RND ++
Sbjct: 29 ITGKVKWFNVKRGYGFVCRNDNQE 52
>UniRef50_A4V6J7 Cluster: Y-Box factor protein; n=1; Dugesia
japonica|Rep: Y-Box factor protein - Dugesia japonica
(Planarian)
Length = 178
Score = 62.9 bits (146), Expect = 6e-09
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 428
EDVFVHQ+AI+R P K +S+G+ E V F VV G KG EA VTGP G+ V GS +A
Sbjct: 26 EDVFVHQSAISRCQPGKQ-KSLGEDEDVLFDVVKGSKGNEAMNVTGPNGDAVLGSKFA 82
Score = 38.3 bits (85), Expect = 0.14
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
G VKW+NVK GYGFI+R+D
Sbjct: 5 GKVKWYNVKKGYGFIHRDD 23
>UniRef50_Q17JD9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 192
Score = 62.5 bits (145), Expect = 8e-09
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAAD 434
ED+FVH++ I + N +S+GDGE VEF ++A + VTGPG +PVKGSP+ A
Sbjct: 57 EDIFVHKSCIFKPNRNHFTKSIGDGEIVEFGLIASK-------VTGPGFKPVKGSPFVA- 108
Query: 435 KRRGYHR 455
+RG HR
Sbjct: 109 -KRGGHR 114
Score = 43.6 bits (98), Expect = 0.004
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 178 AEKVSGTVKWFNVKSGYGFINRNDT 252
+++++GTVKWFN K G+GFI R+DT
Sbjct: 31 SKRITGTVKWFNAKDGFGFITRHDT 55
>UniRef50_P91306 Cluster: Y-box protein 2; n=2; Caenorhabditis
elegans|Rep: Y-box protein 2 - Caenorhabditis elegans
Length = 267
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKA-VRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPY 425
++D+FVHQTAIA++ K +R++GD E V F +V G+ G EAA VTGP G+ V GS Y
Sbjct: 88 EKDIFVHQTAIAKSATEKFYLRTLGDDEEVLFDLVEGKNGPEAANVTGPNGDNVIGSRY 146
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRNDTKKMCLCIRLPSPVTTHVRLCARSATER 333
I + G VKW++V YGFI+RND +K + H A+SATE+
Sbjct: 62 ITTGLQGKVKWYSVLRRYGFISRNDGEK---------DIFVHQTAIAKSATEK 105
>UniRef50_Q9XTJ6 Cluster: Putative uncharacterized protein cey-4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein cey-4 - Caenorhabditis elegans
Length = 294
Score = 60.5 bits (140), Expect = 3e-08
Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKA-VRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 428
ED FVHQTAI +++ K +R++ D E V F +V G KG EAA VTGP GE V+GS +A
Sbjct: 115 EDFFVHQTAITKSSTIKFYLRTLDDDEPVVFDIVEGLKGPEAANVTGPDGENVRGSRFA 173
>UniRef50_Q52KT6 Cluster: MGC115344 protein; n=2; Xenopus|Rep:
MGC115344 protein - Xenopus laevis (African clawed frog)
Length = 221
Score = 56.8 bits (131), Expect = 4e-07
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
V+A KV GTVKWFNV++GYGFINRNDTK+
Sbjct: 31 VLATKVQGTVKWFNVRNGYGFINRNDTKE 59
Score = 46.4 bits (105), Expect = 5e-04
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 363 KGFEAAGVTGPGGEPVKGSPYAADKRRGYHRQYF 464
+G EAA VTGP G PV+GS YAAD+RR Y R Y+
Sbjct: 65 QGAEAANVTGPKGAPVQGSRYAADRRR-YRRGYY 97
>UniRef50_A1L2L1 Cluster: LOC100036881 protein; n=1; Xenopus
laevis|Rep: LOC100036881 protein - Xenopus laevis
(African clawed frog)
Length = 131
Score = 50.0 bits (114), Expect = 4e-05
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +3
Query: 192 GHCEMVQRQEWIWFHQQE*HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG- 368
G C+ ++ F + D+FVHQ+ I + RS+ +GE VEF+V+ E+
Sbjct: 6 GTCKWFNAEKGYGFLTPDDGSPDIFVHQSTIHADG----FRSLAEGEPVEFSVITDERSG 61
Query: 369 -FEAAGVTGPGGEPVKGSP 422
+AA VTGP G V+G+P
Sbjct: 62 KLKAADVTGPNGAAVRGAP 80
Score = 35.5 bits (78), Expect = 0.99
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRND 249
K++GT KWFN + GYGF+ +D
Sbjct: 3 KLTGTCKWFNAEKGYGFLTPDD 24
>UniRef50_UPI000155640A Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 502
Score = 48.4 bits (110), Expect = 1e-04
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKKMCLC--IRLPSPVTTHVRLCARSATERRWSL 345
V+A +V GTVKWFNV++GYGFINR + C C P T R +R+ L
Sbjct: 56 VLATQVLGTVKWFNVRNGYGFINRYRSAPGCGCGSRGRGGPSTRGARSASRAPDNPAKLL 115
Query: 346 PWLP 357
P+ P
Sbjct: 116 PFSP 119
>UniRef50_UPI0000DC0B82 Cluster: UPI0000DC0B82 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B82 UniRef100 entry -
Rattus norvegicus
Length = 147
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRNDTKK 258
VIA KV G V WFNV++GY FINRNDTK+
Sbjct: 91 VIAMKVLGIVTWFNVRNGYVFINRNDTKE 119
Score = 43.2 bits (97), Expect = 0.005
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAVRSVGDGEAVE 341
+ED FVHQT I +NNP K + SVGDGE VE
Sbjct: 118 KEDTFVHQTVIKKNNP-KYLHSVGDGETVE 146
>UniRef50_Q6ZN17 Cluster: Lin-28 homolog B; n=40; Coelomata|Rep:
Lin-28 homolog B - Homo sapiens (Human)
Length = 250
Score = 47.6 bits (108), Expect = 2e-04
Identities = 25/54 (46%), Positives = 31/54 (57%)
Frame = +3
Query: 258 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 419
DVFVHQ+ + + RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 61 DVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGS 110
>UniRef50_Q5CVY2 Cluster: Cold shock RNA binding domain of the OB
fold; n=2; Cryptosporidium|Rep: Cold shock RNA binding
domain of the OB fold - Cryptosporidium parvum Iowa II
Length = 135
Score = 45.2 bits (102), Expect = 0.001
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 192 GHCEMVQRQEWIWFHQQE*HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF 371
G C+ + F + ED+FVHQ +N + RS+ E VE+ + +KG
Sbjct: 13 GVCKWFDSTKGFGFITPDDGSEDIFVHQ----QNIKVEGFRSLAQDERVEYEIETDDKGR 68
Query: 372 -EAAGVTGPGGEPVKGSPYAADKRRGYHR 455
+A V+GP G PVKG D+RRG R
Sbjct: 69 RKAVNVSGPNGAPVKG-----DRRRGRGR 92
>UniRef50_Q1RLA8 Cluster: Zinc finger protein; n=1; Ciona
intestinalis|Rep: Zinc finger protein - Ciona
intestinalis (Transparent sea squirt)
Length = 193
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +3
Query: 183 ESIGHCEMVQRQEWIWFHQQE*HQE---DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVV 353
E+ G+C+ ++ F + + DVFVHQ++I + RS+ +G+ V+F
Sbjct: 26 EAFGNCKWFNSKQGYGFITPDTSSQEKTDVFVHQSSI----DMEGFRSLQEGDRVKFWYK 81
Query: 354 AGEKGFEAAGVTGPGGEPVKGS 419
+KG EA V GPGGE + G+
Sbjct: 82 PSKKGLEAVKVVGPGGEKLVGA 103
>UniRef50_Q75QN8 Cluster: Cold shock domain protein 3; n=2; Triticum
aestivum|Rep: Cold shock domain protein 3 - Triticum
aestivum (Wheat)
Length = 231
Score = 44.4 bits (100), Expect = 0.002
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVKG 416
ED+FVHQ+AI + RS+ + +AVEF ++ G+ G +A+ VT PGG + G
Sbjct: 28 EDLFVHQSAIKSD----GYRSLNENDAVEFEIITGDDGRTKASDVTAPGGGALSG 78
Score = 39.9 bits (89), Expect = 0.046
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRND 249
+ E+V GTVKWFNV G+GFI+ +D
Sbjct: 1 MGERVKGTVKWFNVTKGFGFISPDD 25
>UniRef50_A4RZ32 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 106
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/63 (41%), Positives = 35/63 (55%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAAD 434
E++FVHQT I+ RSV +GE VE+ V + +A VTGP G VKG+P
Sbjct: 28 EEIFVHQTGISC----AGFRSVWEGEEVEYDVDDTDFAPKAVNVTGPDGVAVKGAPRRRH 83
Query: 435 KRR 443
+ R
Sbjct: 84 RNR 86
>UniRef50_A7RV03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 671
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 419
EDVFVHQ+AI + RS+ +GE V+ + +KG A VT PGG VKG+
Sbjct: 506 EDVFVHQSAIKASG----YRSLEEGEHVQLTISNSDKGKVAICVTSPGGGNVKGA 556
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+G+VKWFN+ G+GFI R+D
Sbjct: 484 TGSVKWFNLIKGFGFITRDD 503
>UniRef50_A3BPB0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 238
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPV 410
ED+FVHQ+++ + RS+ DG+ VEF+V +G G +A VT PGG V
Sbjct: 29 EDLFVHQSSLKSDG----YRSLNDGDVVEFSVGSGNDGRTKAVNVTAPGGRAV 77
Score = 35.9 bits (79), Expect = 0.75
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 178 AEKVSGTVKWFNVKSGYGFINRND 249
+E+V GTVKWF+ G+GFI +D
Sbjct: 3 SERVKGTVKWFDATKGFGFITPDD 26
>UniRef50_Q4S6T5 Cluster: Chromosome 14 SCAF14723, whole genome
shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 14
SCAF14723, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 206
Score = 40.7 bits (91), Expect = 0.026
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +3
Query: 312 RSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 419
RS+ +GE VEF KG E+ VTGPGG P GS
Sbjct: 111 RSLKEGEQVEFTFKKSTKGLESLRVTGPGGGPCAGS 146
>UniRef50_Q1QAP9 Cluster: Cold-shock DNA-binding domain protein;
n=5; cellular organisms|Rep: Cold-shock DNA-binding
domain protein - Psychrobacter cryohalolentis (strain
K5)
Length = 71
Score = 39.9 bits (89), Expect = 0.046
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
ED+FVH AI + RS+ DGE VEF+VV G+KG +A V
Sbjct: 27 EDIFVHFRAIQGDG----YRSLKDGEKVEFSVVEGDKGLQAEEV 66
>UniRef50_A4VMZ2 Cluster: Cold shock protein CspA; n=12;
Bacteria|Rep: Cold shock protein CspA - Pseudomonas
stutzeri (strain A1501)
Length = 136
Score = 39.9 bits (89), Expect = 0.046
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRND 249
V+AE+ +GTVKWFN GYGFI R +
Sbjct: 67 VMAERETGTVKWFNDAKGYGFIQRGN 92
Score = 39.1 bits (87), Expect = 0.081
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 258 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTG 392
DVFVH AI + R S+ +G+ VEF+V+ G+KG +A V G
Sbjct: 95 DVFVHYRAIRGDGHR----SLAEGQQVEFSVIQGQKGLQAEDVAG 135
>UniRef50_Q013V8 Cluster: Glycogen debranching enzyme; n=1;
Ostreococcus tauri|Rep: Glycogen debranching enzyme -
Ostreococcus tauri
Length = 141
Score = 38.7 bits (86), Expect = 0.11
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKA--VRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSP 422
EDVFVHQ+ + + R VR G+ +EF + E+ A VTGP G P+K +P
Sbjct: 63 EDVFVHQSELQMDGFRSVWEVRLQQAGDEIEFELDDDERR-RAKNVTGPAGAPLKKTP 119
>UniRef50_O65639 Cluster: Glycine-rich protein; n=8;
Magnoliophyta|Rep: Glycine-rich protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 299
Score = 38.7 bits (86), Expect = 0.11
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 258 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVK 413
++FVHQ++I + RS+ G+AVEFA+ G G +A VT PGG +K
Sbjct: 35 ELFVHQSSIVS----EGYRSLTVGDAVEFAITQGSDGKTKAVNVTAPGGGSLK 83
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 178 AEKVSGTVKWFNVKSGYGFINRND 249
A + +G V WFN GYGFI +D
Sbjct: 8 AARSTGKVNWFNASKGYGFITPDD 31
>UniRef50_Q9ZBH4 Cluster: Putative DNA-binding protein; n=2;
Actinomycetales|Rep: Putative DNA-binding protein -
Streptomyces coelicolor
Length = 162
Score = 37.5 bits (83), Expect = 0.25
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGE 404
EDVF+H + P ++VRS G VEF V +GE+G +A+G+ P GE
Sbjct: 45 EDVFLHVNDLLI--PEESVRS---GLVVEFEVESGERGLKASGIRLPEGE 89
>UniRef50_A5NZH6 Cluster: Putative cold-shock DNA-binding domain
protein precursor; n=1; Methylobacterium sp. 4-46|Rep:
Putative cold-shock DNA-binding domain protein precursor
- Methylobacterium sp. 4-46
Length = 242
Score = 37.5 bits (83), Expect = 0.25
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVT 389
+DVFVH++A+A R + S+ +G+ V VV G+KG EA +T
Sbjct: 199 KDVFVHRSALA----RAGLDSLAEGQQVTMGVVEGQKGREAQSIT 239
>UniRef50_UPI0000589074 Cluster: PREDICTED: similar to
ENSANGP00000011455; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000011455
- Strongylocentrotus purpuratus
Length = 234
Score = 37.1 bits (82), Expect = 0.33
Identities = 27/76 (35%), Positives = 32/76 (42%)
Frame = +3
Query: 192 GHCEMVQRQEWIWFHQQE*HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF 371
G C+ + F + DVFVHQ I RS+ E VE+ EKG
Sbjct: 65 GKCKWFSLAKCYGFLTPDDGSGDVFVHQRVIKM----VGYRSLDTNEEVEYKFQFSEKGR 120
Query: 372 EAAGVTGPGGEPVKGS 419
EA VTG G KGS
Sbjct: 121 EATTVTGVDGGDCKGS 136
>UniRef50_Q3Y013 Cluster: Cold-shock protein, DNA-binding; n=6;
cellular organisms|Rep: Cold-shock protein, DNA-binding
- Enterococcus faecium DO
Length = 35
Score = 37.1 bits (82), Expect = 0.33
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+GTVKWFN + G+GFI+R D
Sbjct: 3 NGTVKWFNAEKGFGFISRED 22
>UniRef50_Q016S2 Cluster: Putative nucleic acid binding protein;
n=1; Ostreococcus tauri|Rep: Putative nucleic acid
binding protein - Ostreococcus tauri
Length = 125
Score = 37.1 bits (82), Expect = 0.33
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Frame = +3
Query: 252 QEDVFVHQTAIARNNPRKAV--RSVGDGEAVEFAVV---AGEKGFEAAGVTGPGGEPVKG 416
+ DVFVHQ+A+ R+ R G++VEF V ++ +A VTG GG P+K
Sbjct: 33 EPDVFVHQSALKMEGFRRTDGRRFATQGDSVEFDVEHESPTDERLKAVCVTGIGGAPLKA 92
Query: 417 SPYA----ADKRRGYHRQ 458
P + K+RG R+
Sbjct: 93 PPRTNYRRSSKKRGPRRE 110
>UniRef50_A5BWB0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 189
Score = 37.1 bits (82), Expect = 0.33
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKG-FEAAGVTGPGGEPVKG 416
ED+FVHQT+I + R++ +GE VEFAV GE G +A VT G G
Sbjct: 30 EDLFVHQTSIRSDG----FRTLSEGETVEFAVDHGEDGRTKAVEVTAVRGSYSSG 80
>UniRef50_Q4UBG6 Cluster: Cold shock protein, putative; n=2;
Theileria|Rep: Cold shock protein, putative - Theileria
annulata
Length = 95
Score = 37.1 bits (82), Expect = 0.33
Identities = 26/76 (34%), Positives = 37/76 (48%)
Frame = +3
Query: 192 GHCEMVQRQEWIWFHQQE*HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF 371
G C+ ++ F E + EDVFVHQ+ I + RS+ + E VE V+
Sbjct: 6 GVCKWFNNKKGYGFITLE-NGEDVFVHQSEIYADG----FRSLHENEKVELEVIMDNNRK 60
Query: 372 EAAGVTGPGGEPVKGS 419
+A VTGP G V G+
Sbjct: 61 KAIHVTGPNGTHVTGT 76
>UniRef50_UPI00015BD510 Cluster: UPI00015BD510 related cluster; n=1;
unknown|Rep: UPI00015BD510 UniRef100 entry - unknown
Length = 86
Score = 36.7 bits (81), Expect = 0.43
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = +1
Query: 187 VSGTVKWFNVKSGYGFINRNDTK 255
++GTVKWF+ + GYGF+ R+D +
Sbjct: 18 ITGTVKWFSKEKGYGFLTRDDNQ 40
>UniRef50_Q2BKV8 Cluster: Cold-shock domain family protein; n=3;
Bacteria|Rep: Cold-shock domain family protein -
Neptuniibacter caesariensis
Length = 149
Score = 36.7 bits (81), Expect = 0.43
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 181 EKVSGTVKWFNVKSGYGFINRND 249
++ GTVKWFNV G+GFI R +
Sbjct: 81 DREQGTVKWFNVSKGFGFITRGE 103
>UniRef50_Q4JMV8 Cluster: Predicted cold shock family protein; n=1;
uncultured bacterium BAC17H8|Rep: Predicted cold shock
family protein - uncultured bacterium BAC17H8
Length = 83
Score = 36.3 bits (80), Expect = 0.57
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
GTVKWFN + GYGFIN ++
Sbjct: 18 GTVKWFNTQKGYGFINPDE 36
>UniRef50_A0YCJ0 Cluster: Cold-shock DNA-binding protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Cold-shock
DNA-binding protein - marine gamma proteobacterium
HTCC2143
Length = 144
Score = 36.3 bits (80), Expect = 0.57
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINR 243
GTVKWFNV GYGF+ R
Sbjct: 79 GTVKWFNVSKGYGFVTR 95
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/44 (43%), Positives = 30/44 (68%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
E++FVH +I+ N RK +R +G+ +EF+VV G+KG +A V
Sbjct: 99 EEIFVHFRSISGNG-RKVLR---EGQKIEFSVVDGDKGPQAEDV 138
>UniRef50_Q38896 Cluster: Glycine-rich protein 2b; n=26; cellular
organisms|Rep: Glycine-rich protein 2b - Arabidopsis
thaliana (Mouse-ear cress)
Length = 201
Score = 36.3 bits (80), Expect = 0.57
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGF-EAAGVTGPGGEPVKGS 419
+D+FVHQ++I + RS+ E+VEF V G +A V+GP G PV+G+
Sbjct: 38 DDLFVHQSSIRS----EGFRSLAAEESVEFDVEVDNSGRPKAIEVSGPDGAPVQGN 89
Score = 32.3 bits (70), Expect = 9.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 181 EKVSGTVKWFNVKSGYGFINRND 249
++ GTVKWF+ + G+GFI +D
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSD 35
>UniRef50_Q1ZKE8 Cluster: Cold shock protein; n=3;
Gammaproteobacteria|Rep: Cold shock protein - Vibrio
angustum S14
Length = 68
Score = 35.9 bits (79), Expect = 0.75
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRNDTK 255
K++GTVKWFN G+GFI+ D K
Sbjct: 3 KLTGTVKWFNDDKGFGFISGTDGK 26
Score = 32.7 bits (71), Expect = 7.0
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
+DVFVH +AI R+ +R +G++VEF V G+KG +A+ V
Sbjct: 26 KDVFVHFSAIQAQG-RRTLR---EGQSVEFIVTDGQKGPQASEV 65
>UniRef50_A5ZS66 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 75
Score = 35.9 bits (79), Expect = 0.75
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRND 249
++E + GTVKWF+ + GYGFI D
Sbjct: 1 MSETLQGTVKWFSAQKGYGFITGED 25
>UniRef50_Q1N1Z0 Cluster: Cold shock protein; n=14; Bacteria|Rep:
Cold shock protein - Oceanobacter sp. RED65
Length = 171
Score = 35.5 bits (78), Expect = 0.99
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
G VKWFNVK G+GFI R++
Sbjct: 108 GLVKWFNVKKGFGFITRDN 126
>UniRef50_Q1GQL9 Cluster: Cold-shock DNA-binding domain protein;
n=30; Proteobacteria|Rep: Cold-shock DNA-binding domain
protein - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 249
Score = 35.5 bits (78), Expect = 0.99
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 181 EKVSGTVKWFNVKSGYGFINRND 249
E+ SGTVK+FN G+GFI R+D
Sbjct: 179 ERTSGTVKFFNTTKGFGFIARDD 201
>UniRef50_P0A981 Cluster: Cold shock-like protein cspG; n=154;
Bacteria|Rep: Cold shock-like protein cspG - Shigella
flexneri
Length = 70
Score = 35.5 bits (78), Expect = 0.99
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRNDTKK 258
++ K++G VKWFN G+GFI +D K
Sbjct: 1 MSNKMTGLVKWFNADKGFGFITPDDGSK 28
Score = 33.9 bits (74), Expect = 3.0
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
+DVFVH TAI N R++ + + VEF++ G++G AA V
Sbjct: 28 KDVFVHFTAIQSNE----FRTLNENQKVEFSIEQGQRGPAAANV 67
>UniRef50_Q2RQP4 Cluster: Cold-shock DNA-binding domain protein;
n=1; Rhodospirillum rubrum ATCC 11170|Rep: Cold-shock
DNA-binding domain protein - Rhodospirillum rubrum
(strain ATCC 11170 / NCIB 8255)
Length = 70
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+GTVKWFNV+ G+GFI +D
Sbjct: 3 TGTVKWFNVQKGFGFIAPDD 22
>UniRef50_Q9ZFK8 Cluster: CspB; n=4; cellular organisms|Rep: CspB -
Myxococcus xanthus
Length = 66
Score = 35.1 bits (77), Expect = 1.3
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
EDVF H TAI + R++ +G+ VEF V G KG +A V
Sbjct: 24 EDVFCHHTAINMD----GFRTLQEGQQVEFEVTRGPKGLQAQNV 63
>UniRef50_Q7D268 Cluster: AGR_C_161p; n=7; Proteobacteria|Rep:
AGR_C_161p - Agrobacterium tumefaciens (strain C58 /
ATCC 33970)
Length = 163
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+GTVKWFN GYGFI +D
Sbjct: 97 TGTVKWFNATKGYGFIQPDD 116
>UniRef50_A5ZXC4 Cluster: Putative uncharacterized protein; n=2;
cellular organisms|Rep: Putative uncharacterized protein
- Ruminococcus obeum ATCC 29174
Length = 66
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
GTVKWFN + GYGFI D
Sbjct: 4 GTVKWFNAEKGYGFITGED 22
>UniRef50_A3YF52 Cluster: Cold-shock protein, DNA-binding; n=2;
Marinomonas|Rep: Cold-shock protein, DNA-binding -
Marinomonas sp. MED121
Length = 79
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRND 249
+ +K+ GTVKWFN G GFI R++
Sbjct: 1 MTDKLKGTVKWFNDSKGVGFIQRDN 25
>UniRef50_P39818 Cluster: Cold shock-like protein cspJ; n=7;
Bacteria|Rep: Cold shock-like protein cspJ - Salmonella
typhimurium
Length = 70
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRNDTKK 258
K++G VKWFN + G+GFI D K
Sbjct: 4 KITGLVKWFNPEKGFGFITPKDGSK 28
>UniRef50_Q6N3M1 Cluster: Cold shock DNA binding protein; n=78;
Bacteria|Rep: Cold shock DNA binding protein -
Rhodopseudomonas palustris
Length = 84
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
GTVKWFN GYGFI +D
Sbjct: 18 GTVKWFNATKGYGFIQPDD 36
>UniRef50_Q1FKR2 Cluster: Cold-shock protein, DNA-binding; n=2;
Clostridium|Rep: Cold-shock protein, DNA-binding -
Clostridium phytofermentans ISDg
Length = 70
Score = 34.7 bits (76), Expect = 1.7
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRNDTKKMCL 267
+GTVKW++ + GYGF++ ND + + L
Sbjct: 5 TGTVKWYDSERGYGFVSTNDGRDVFL 30
>UniRef50_A1CFX7 Cluster: Cold shock NA binding domain protein; n=2;
cellular organisms|Rep: Cold shock NA binding domain
protein - Aspergillus clavatus
Length = 125
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 181 EKVSGTVKWFNVKSGYGFI 237
E+ +GTVKWFN + GYGFI
Sbjct: 58 ERQNGTVKWFNDEKGYGFI 76
>UniRef50_P0A975 Cluster: Cold shock-like protein cspE; n=28;
Bacteria|Rep: Cold shock-like protein cspE - Shigella
flexneri
Length = 69
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRNDTKK 258
K+ G VKWFN G+GFI D K
Sbjct: 3 KIKGNVKWFNESKGFGFITPEDGSK 27
>UniRef50_P0A9Y2 Cluster: Cold shock protein cspA; n=39;
Gammaproteobacteria|Rep: Cold shock protein cspA -
Salmonella typhimurium
Length = 70
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRNDTKK 258
K++G VKWFN G+GFI +D K
Sbjct: 4 KMTGIVKWFNADKGFGFITPDDGSK 28
>UniRef50_Q60AQ4 Cluster: Cold shock protein; n=27; Bacteria|Rep:
Cold shock protein - Methylococcus capsulatus
Length = 69
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRND 249
++++ GTVKWFN G+GFI R +
Sbjct: 1 MSQQQQGTVKWFNESKGFGFIQREN 25
>UniRef50_P54584 Cluster: Cold shock protein; n=6; Bacteria|Rep:
Cold shock protein - Arthrobacter globiformis
Length = 67
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRNDT 252
GTVKWFN + G+GFI +D+
Sbjct: 4 GTVKWFNAEKGFGFITPDDS 23
>UniRef50_P81622 Cluster: Cold shock protein CspSt; n=6;
Streptococcus thermophilus|Rep: Cold shock protein CspSt
- Streptococcus thermophilus
Length = 21
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+GTVKWFN + G+GFI D
Sbjct: 2 NGTVKWFNAEKGFGFITSED 21
>UniRef50_P39158 Cluster: Cold shock protein cspC; n=41;
Bacteria|Rep: Cold shock protein cspC - Bacillus
subtilis
Length = 66
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
GTVKWFN + G+GFI R +
Sbjct: 4 GTVKWFNAEKGFGFIEREN 22
>UniRef50_P62169 Cluster: Cold shock-like protein cspC; n=26;
cellular organisms|Rep: Cold shock-like protein cspC -
Bacillus anthracis
Length = 65
Score = 34.3 bits (75), Expect = 2.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 187 VSGTVKWFNVKSGYGFINRND 249
+ G VKWFN + G+GFI R D
Sbjct: 1 MQGRVKWFNAEKGFGFIERED 21
>UniRef50_Q08VT0 Cluster: Conserved domain protein; n=2;
Bacteria|Rep: Conserved domain protein - Stigmatella
aurantiaca DW4/3-1
Length = 100
Score = 33.9 bits (74), Expect = 3.0
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 231 FHQQE*HQEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
F Q+ EDVF H TAI + R++ +G+ V+F V G KG +A V
Sbjct: 50 FITQDGGGEDVFCHHTAINMD----GFRTLQEGQKVQFDVARGPKGLQAQNV 97
>UniRef50_A4BC11 Cluster: Cold shock protein; n=1; Reinekea sp.
MED297|Rep: Cold shock protein - Reinekea sp. MED297
Length = 153
Score = 33.9 bits (74), Expect = 3.0
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 181 EKVSGTVKWFNVKSGYGFINRND 249
++ G VKWFNV G+GF+ R++
Sbjct: 84 DREEGLVKWFNVSKGFGFVTRDN 106
>UniRef50_A7ENM1 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 253
Score = 33.9 bits (74), Expect = 3.0
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = -1
Query: 536 AGVHDVLILPAWSSFTASSATLTREILAVVATALVCSIR*AFYWLTTGTSNTSCFKAFLP 357
AG+ D+LI+PA + T LA++ +L+ A+ W +G CF
Sbjct: 48 AGIDDILIIPAIVCYLGQGVTGLSSFLALILCSLLQCAPLAYLWNKSGHPGGHCFDTGAF 107
Query: 356 GNHGKLHRL 330
+G L L
Sbjct: 108 WRYGSLPNL 116
>UniRef50_Q83RI9 Cluster: Cold shock-like protein cspC; n=38;
Gammaproteobacteria|Rep: Cold shock-like protein cspC -
Shigella flexneri
Length = 69
Score = 33.9 bits (74), Expect = 3.0
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVT 389
+DVFVH +AI N ++++ +G+ VEF + G+KG A VT
Sbjct: 27 KDVFVHFSAIQGNG----LKTLAEGQNVEFEIQDGQKGPAAVNVT 67
Score = 33.5 bits (73), Expect = 4.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRNDTKK 258
K+ G VKWFN G+GFI D K
Sbjct: 3 KIKGQVKWFNESKGFGFITPADGSK 27
>UniRef50_Q9Z3S6 Cluster: Cold shock protein cspA; n=59;
Alphaproteobacteria|Rep: Cold shock protein cspA -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 69
Score = 33.9 bits (74), Expect = 3.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
SGTVKWFN G+GFI +D
Sbjct: 3 SGTVKWFNSTKGFGFIQPDD 22
>UniRef50_P72188 Cluster: Cold shock protein capA; n=23;
Proteobacteria|Rep: Cold shock protein capA -
Pseudomonas fragi
Length = 64
Score = 33.9 bits (74), Expect = 3.0
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFI 237
++++ SGTVKWFN + G+GFI
Sbjct: 1 MSQRQSGTVKWFNDEKGFGFI 21
>UniRef50_Q9KXN2 Cluster: Cold shock protein B; n=7; Bacteria|Rep:
Cold shock protein B - Streptomyces coelicolor
Length = 127
Score = 33.5 bits (73), Expect = 4.0
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+G VKWFN + G+GF++R+D
Sbjct: 3 TGKVKWFNSEKGFGFLSRDD 22
>UniRef50_Q6FAY9 Cluster: Cold shock-like protein; n=44;
Bacteria|Rep: Cold shock-like protein - Acinetobacter
sp. (strain ADP1)
Length = 69
Score = 33.5 bits (73), Expect = 4.0
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRN 246
++ V+GTVKWFN G+GFI ++
Sbjct: 1 MSNSVNGTVKWFNEVKGFGFIQQD 24
>UniRef50_A3Y9L0 Cluster: Cold-shock DNA-binding domain protein;
n=2; Marinomonas|Rep: Cold-shock DNA-binding domain
protein - Marinomonas sp. MED121
Length = 97
Score = 33.5 bits (73), Expect = 4.0
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1
Query: 187 VSGTVKWFNVKSGYGFINR 243
VSG VKWFN + G+GFI R
Sbjct: 33 VSGIVKWFNDEKGFGFIER 51
>UniRef50_Q9AN51 Cluster: ID534; n=52; Bacteria|Rep: ID534 -
Bradyrhizobium japonicum
Length = 120
Score = 33.1 bits (72), Expect = 5.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRNDTKK 258
GTVKWFN GYGF+ +D K
Sbjct: 56 GTVKWFNPTKGYGFVAPDDGGK 77
>UniRef50_Q2S0T4 Cluster: Conserved domain protein; n=2;
Bacteroidetes/Chlorobi group|Rep: Conserved domain
protein - Salinibacter ruber (strain DSM 13855)
Length = 110
Score = 33.1 bits (72), Expect = 5.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+ TVKWF+ K GYGFI+ D
Sbjct: 3 TSTVKWFDAKKGYGFIHHPD 22
>UniRef50_Q2J4H7 Cluster: Cold-shock DNA-binding domain protein;
n=13; Bacteria|Rep: Cold-shock DNA-binding domain
protein - Frankia sp. (strain CcI3)
Length = 67
Score = 33.1 bits (72), Expect = 5.3
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 258 DVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
DVFVH ++I + +S+ +G++V+F +V G+KG +A V
Sbjct: 26 DVFVHYSSIVADG----YKSLDEGQSVQFEIVQGQKGPQADNV 64
Score = 32.3 bits (70), Expect = 9.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFIN 240
GTVKWFN + G+GFI+
Sbjct: 4 GTVKWFNAEKGFGFIS 19
>UniRef50_Q8GI47 Cluster: Cold shock protein homolog; n=5;
Deinococci|Rep: Cold shock protein homolog - Thermus
thermophilus
Length = 73
Score = 33.1 bits (72), Expect = 5.3
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINR 243
G VKWFN + GYGFI R
Sbjct: 4 GRVKWFNAEKGYGFIER 20
>UniRef50_Q9PA96 Cluster: Temperature acclimation protein B; n=24;
Bacteria|Rep: Temperature acclimation protein B -
Xylella fastidiosa
Length = 85
Score = 32.7 bits (71), Expect = 7.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
GTVKWFN G+GFI N+
Sbjct: 23 GTVKWFNDNKGFGFITSNN 41
>UniRef50_Q89KY2 Cluster: Bll4766 protein; n=5;
Bradyrhizobiaceae|Rep: Bll4766 protein - Bradyrhizobium
japonicum
Length = 743
Score = 32.7 bits (71), Expect = 7.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 300 RKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGS 419
R R++GDG+ +G AG +G GGE V G+
Sbjct: 52 RTRARAIGDGDTARLRAPSGAPAGNGAGSSGSGGEAVAGN 91
>UniRef50_Q9ZFK9 Cluster: CspA; n=25; Bacteria|Rep: CspA -
Myxococcus xanthus
Length = 68
Score = 32.7 bits (71), Expect = 7.0
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRND 249
+GTVKWFN G+GFI ++D
Sbjct: 3 TGTVKWFNDAKGFGFIAQDD 22
>UniRef50_A7DA86 Cluster: Putative cold-shock DNA-binding domain
protein; n=3; Methylobacterium extorquens PA1|Rep:
Putative cold-shock DNA-binding domain protein -
Methylobacterium extorquens PA1
Length = 69
Score = 32.7 bits (71), Expect = 7.0
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 190 SGTVKWFNVKSGYGFINRNDTKK 258
+GTVKWFN GYGFI ++ K
Sbjct: 3 TGTVKWFNETKGYGFIQPDNGGK 25
>UniRef50_P0A363 Cluster: Cold shock-like protein cspB; n=367;
root|Rep: Cold shock-like protein cspB - Yersinia
enterocolitica
Length = 70
Score = 32.7 bits (71), Expect = 7.0
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGV 386
+DVFVH +AI N+ +++ +G+ VEF++ G+KG A V
Sbjct: 28 KDVFVHFSAIQGND----YKTLDEGQNVEFSIEQGQKGPSAVNV 67
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 175 IAEKVSGTVKWFNVKSGYGFINRNDTKK 258
++ K++G VKWF+ G+GFI+ D K
Sbjct: 1 MSNKMTGLVKWFDAGKGFGFISPADGSK 28
>UniRef50_UPI0000DA19CE Cluster: PREDICTED: similar to nuclease
sensitive element binding protein 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to nuclease sensitive
element binding protein 1 - Rattus norvegicus
Length = 90
Score = 32.3 bits (70), Expect = 9.3
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 360 EKGFEAAGVTGPGGEPVKGSPYAA 431
+KG +A TGPGG PV+G YAA
Sbjct: 6 KKGPDAENDTGPGGAPVQGRKYAA 29
>UniRef50_Q4KIT8 Cluster: Membrane protein, putative; n=1;
Pseudomonas fluorescens Pf-5|Rep: Membrane protein,
putative - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 211
Score = 32.3 bits (70), Expect = 9.3
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +3
Query: 300 RKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRRG 446
R AV G G VE AG GV+G G+P + AAD+RRG
Sbjct: 113 RPAVHVAGAGRPVEHGSGAGPLWL--GGVSGSAGQPRQDCRIAADRRRG 159
>UniRef50_Q8D046 Cluster: Cold shock protein; n=14;
Enterobacteriaceae|Rep: Cold shock protein - Yersinia
pestis
Length = 77
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 193 GTVKWFNVKSGYGFINRND 249
G VKWFN GYGFI+ +D
Sbjct: 14 GRVKWFNQSEGYGFISPHD 32
>UniRef50_Q0M3I1 Cluster: Cold-shock protein, DNA-binding; n=1;
Caulobacter sp. K31|Rep: Cold-shock protein, DNA-binding
- Caulobacter sp. K31
Length = 201
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 184 KVSGTVKWFNVKSGYGFINRND 249
++SG VKWF+ GYGFI +D
Sbjct: 17 RISGRVKWFDTGKGYGFIVPDD 38
>UniRef50_A4U251 Cluster: Cold shock DNA-binding domain protein;
n=3; Magnetospirillum|Rep: Cold shock DNA-binding domain
protein - Magnetospirillum gryphiswaldense
Length = 209
Score = 32.3 bits (70), Expect = 9.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 172 VIAEKVSGTVKWFNVKSGYGFINRND 249
V V+ TVKWFN G+GF+ +D
Sbjct: 47 VTQTNVTATVKWFNASKGFGFVAPSD 72
>UniRef50_Q5ENQ3 Cluster: Chloroplast lipoate protein ligase; n=1;
Heterocapsa triquetra|Rep: Chloroplast lipoate protein
ligase - Heterocapsa triquetra (Dinoflagellate)
Length = 255
Score = 32.3 bits (70), Expect = 9.3
Identities = 23/58 (39%), Positives = 28/58 (48%)
Frame = +3
Query: 255 EDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEAAGVTGPGGEPVKGSPYA 428
+D FV A +P +V SV D V A E F+A V GPGGE G+P A
Sbjct: 200 KDKFVTSLAAESADPTLSVASVMDT-----VVRAFEAEFQATAVDGPGGEDSGGAPAA 252
>UniRef50_A3EXS4 Cluster: RNA-binding protein LIN-28-like protein;
n=1; Maconellicoccus hirsutus|Rep: RNA-binding protein
LIN-28-like protein - Maconellicoccus hirsutus (hibiscus
mealybug)
Length = 124
Score = 32.3 bits (70), Expect = 9.3
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +3
Query: 336 VEFAVVAGEKGFEAAGVTGPGGEPVKGSPYAADKRR 443
VEF KG+EA VTGP G GS A KRR
Sbjct: 2 VEFECEETPKGYEATIVTGPNGNFCIGSQRAMGKRR 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,408,636
Number of Sequences: 1657284
Number of extensions: 7996447
Number of successful extensions: 28937
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 27729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28913
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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