Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30114.Seq
(672 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 101 7e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 75 4e-14
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 64 1e-10
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 64 1e-10
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 61 7e-10
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 61 7e-10
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 59 3e-09
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 56 3e-08
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 42 6e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 38 0.010
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 36 0.022
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 34 0.091
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 34 0.091
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 34 0.12
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 33 0.21
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 2.6
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 29 2.6
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.5
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 28 7.9
SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06) 28 7.9
SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07) 28 7.9
SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 101 bits (241), Expect = 7e-22
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +1
Query: 253 QLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEV 432
+LAKVDAT E L E + V+GYPT+KFF++G P +Y+GGR A +I+SWL KKTGPPA ++
Sbjct: 78 KLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIVSWLNKKTGPPAKDL 137
Query: 433 TSAEQAKELIDANTVIVFGFFSDQ 504
+A+ K+ I V V GFF+D+
Sbjct: 138 ATADAMKDFI-TKEVAVVGFFTDK 160
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = +2
Query: 23 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLA 202
M++L +AL+ LA +E+ EE+VLVL++ NF+ + +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 203 PEYAKAATKLAEEESPIN*RKL 268
PEYAKAA +L E+S I K+
Sbjct: 61 PEYAKAAGQLKSEKSEIKLAKV 82
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Frame = +2
Query: 8 ADNIEMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVITTTEY-ILVEFYAP 175
++N++ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 176 WCGHCKSLAPEYAKAATK 229
WCGHCK LAP + + K
Sbjct: 413 WCGHCKQLAPIWDQLGEK 430
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFF-RNGSPIDYSGGRQADDIISWLK---KKTGPPA 423
+AK+D+T + E V +PT+K+F + G +DY+GGR DD + +L+ K PA
Sbjct: 439 VAKMDSTANE--VEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFVKFLESGGKAGNEPA 496
Query: 424 VE 429
E
Sbjct: 497 AE 498
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 483 IWFLFGPELARAKTFLSTAQVVDDQVFAIVSDEKVIQ 593
+ F E AK FLS A +DD F IVSD+ + Q
Sbjct: 154 VGFFTDKESDAAKAFLSAADGIDDVEFGIVSDKLLPQ 190
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 84.2 bits (199), Expect = 9e-17
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = +2
Query: 74 DEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 253
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ + P+
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPV 114
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +2
Query: 83 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 253
P L L+K NF V+ +LVEF+APWCGHCK LAPEY KAA +L + + PI
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPI 229
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVT 435
LA VDAT E +LA+ Y V+GYPTLK FR G +Y G R I S+++ + GP + ++
Sbjct: 231 LAIVDATIESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYGIASYMRSQVGPSSRILS 290
Query: 436 SAEQAKELI-DANTVIVFGFFSDQ 504
S + ++ + + + V + GFF +
Sbjct: 291 SLKAVQDFMKEKDDVTIMGFFDGE 314
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 6/86 (6%)
Frame = +1
Query: 259 AKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG-----PPA 423
AK+DAT D+A+ + V GYPTLK FR G+P +Y G R+ I+ ++KK++ PP
Sbjct: 117 AKMDATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPNWKPPPV 176
Query: 424 VEVT-SAEQAKELIDANTVIVFGFFS 498
+T + E E+++ ++++ FF+
Sbjct: 177 AALTLTKENFTEVVNRESLMLVEFFA 202
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFFRNG---SPIDYSGGRQADDIISWLKKKTGPPAV 426
+AK+DAT D+ +Y V G+PT+ F + +PI + GGR+ D+I ++++K A
Sbjct: 578 IAKIDATAN-DVPSTYAVEGFPTIYFATSKDKKNPIKFDGGRELKDLIKFVEEK----AT 632
Query: 427 EVTSAEQAKE 456
S E+AK+
Sbjct: 633 VSLSKEKAKD 642
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 11 DNIEMRVLIFTAIALLGLALGDEVP--TEENVLVLSKANFETVITTTEY-ILVEFYAPWC 181
D++ V F A L + VP +E V V+ F+ ++ + +L+EFYAPWC
Sbjct: 496 DSLREFVEEFKAGNLKPIIKSQPVPKSNKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWC 555
Query: 182 GHCKSLAPEYAK 217
G +L P + K
Sbjct: 556 G--IALEPTFKK 565
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 75.4 bits (177), Expect = 4e-14
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Frame = +1
Query: 256 LAKVDATQE-QDLAESYGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTGPPAVE 429
LAKVD T+ +D YGV GYPTLK FRNG DY G R + II ++KK+ GP +VE
Sbjct: 593 LAKVDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGIIRYMKKQAGPSSVE 652
Query: 430 VTSAEQ-AKELIDANTVIVFGF 492
+ S + K+L DA + +V GF
Sbjct: 653 IKSVDHLEKKLDDAESNVVVGF 674
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 95 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 253
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + + P+
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPV 591
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 98 VLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIN*RKLTQ 274
V V+ NF+ ++ T+ +L+EFYAPWCGHCKSL P+Y + KL ++ I K+
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDA 922
Query: 275 LKNRISPRATVYEDTRLSNSSGMXVLSTIQVVV 373
N P +V + + + G+ ++ I +++
Sbjct: 923 TANDAPPNFSV-QGIIIISIIGIIIIVIIMIII 954
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 301 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 414
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 486
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 95 NVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 253
+VL L +NF++ + + +LVEF+APWCGHCK LAPEY AA L + + P+
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPV 66
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/49 (57%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +2
Query: 89 EENVLVLSKANFET-VITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 232
+E+V+ L+ NFE V+ + + LVEF+APWCGHC+ LAPE+AKAAT+L
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Frame = +1
Query: 253 QLAKVDATQEQDLAESYGVRGYPTLKFFRNG-----SPIDYSGGRQADDIISWLKKKTG- 414
++ +DAT A Y V+GYPT+K F G S DY GGR A DII + K
Sbjct: 131 KVGALDATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDIIQYALDKAAD 190
Query: 415 ----PPAVEVTSAEQAKELIDANTVIVFGF 492
P ++ S E KE + + + V F
Sbjct: 191 SIEPPEVIQAISNEVLKEGCNEHPICVIAF 220
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 283 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 390
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2
Query: 86 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEY 211
T+ V+ L+K NF+ V+ ++ LVEFYAPWCGHCK LAP Y
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTY 61
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFFRNGS--PIDYSGGRQADDIISWLKKKTG 414
+AKVDA ++DL + V+G+PT+K+F GS P +Y+GGR +D I ++++KTG
Sbjct: 76 IAKVDADGDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +2
Query: 62 LALGDEVPTEENVLV-LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 232
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A +L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKEL 180
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 83 PTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIN*R 262
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + +
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFA 107
Query: 263 KL 268
K+
Sbjct: 108 KV 109
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/62 (45%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +2
Query: 74 DEVP---TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 244
DE P T V+ L F+ + +LV FYAPWCGHCK++ PEY AA L E+E
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 245 SP 250
P
Sbjct: 133 IP 134
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +2
Query: 77 EVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 223
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 35.9 bits (79), Expect = 0.030
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 238 RRISYQLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL-KKKTG 414
R I+Y A VD T+E + + +GV GY F + Y+ GR+A D I ++ + G
Sbjct: 266 RLIAY--AAVDCTKEMAVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQFMDDPREG 319
Query: 415 PP 420
PP
Sbjct: 320 PP 321
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 152 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 241
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPT 324
LA VDAT+E L + + V GYPT
Sbjct: 137 LAAVDATKEAALGKRFKVEGYPT 159
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 EENVLV--LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 253
E++ LV L ++F + TE++LV FYAPWCGHCK+ P+Y KAA ++ + +
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRV 200
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/66 (34%), Positives = 36/66 (54%)
Frame = +2
Query: 59 GLALGDEVPTEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 238
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 239 EESPIN 256
E++ N
Sbjct: 99 EDANCN 104
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +1
Query: 259 AKVDATQEQDLAESYGVRGYPTLKFFRNGS-PIDYSGGRQADDIISWLKKKTGP 417
AK+D T+ D+ + V GYPTL+++ G ++Y G R +D+IS++++ P
Sbjct: 202 AKLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLISFMEEPPLP 255
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWL 399
LA VD T+ +D+A+ + GYPT+K ++ + + + ++ L
Sbjct: 105 LAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAKAASAEEDSSLVKQL 152
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +2
Query: 89 EENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 241
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKE 71
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +2
Query: 107 LSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLA 235
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALA 67
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 104 VLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKL 232
V SK F V+ + + +V+FYAPWCG C AP+Y + A L
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML 480
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 62 LALGDEVPTEENVLVLSKANFETVITT-TEYILVEFYAPWCGHCKSLAPEYAKAA 223
+AL + NV L +F + +T+ + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAA 328
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 265 VDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLK 402
VD T L Y +R YPT + N P + G A DII +++
Sbjct: 341 VDCTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNALDIIEFVE 386
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 405
+AKVD T + +L +R YPT+K + +G Y+G R A+D+ ++ K
Sbjct: 21 IAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRNAEDMKVFVDK 70
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 86 TEENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA 223
+E V +L+K F+ I + V+FYAPWC HC LAP + + A
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLA 132
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 307 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 399
+ GYPTL F++G +YSG R D + ++
Sbjct: 146 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 177
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 113 KANFETVITTTE--YILVEFYAPWCGHCKSLAPEYAKAA 223
+A F +VI T+ ++++FYA WCG C+ + P++ K A
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA 56
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +2
Query: 95 NVLVLS-KANFETVITT--TEYILVEFYAPWCGHCKSLAPEYAKAATK 229
NV VL + F +T T+ ++ +F A WCG CKS+AP Y+ + K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEK 55
Score = 32.3 bits (70), Expect = 0.37
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 262 KVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTG 414
K+D Q+LA GV PT +FF+N +D G + +KK G
Sbjct: 63 KIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALEDAIKKWIG 113
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +2
Query: 95 NVLVLSKANFETVITT---TEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 238
NV+V+ +F +V + ++++F A WCG CKS+AP + + K +
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD 59
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 262 KVDATQEQDLAESYGVRGYPTLKFFRNGSPID 357
KVD Q Q AES G+R PT F+ N + ID
Sbjct: 64 KVDVDQCQLTAESCGIRAMPTFHFYHNKAKID 95
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 34.3 bits (75), Expect = 0.091
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 125 ETVITTTEYILVEFYAPWCGHCKSLAP 205
+ VI + +L+ FY PWCG C + AP
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP 555
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 34.3 bits (75), Expect = 0.091
Identities = 10/51 (19%), Positives = 28/51 (54%)
Frame = +2
Query: 92 ENVLVLSKANFETVITTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 244
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRD 76
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +1
Query: 256 LAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKKKTGPPAVEVT 435
+A V+ +E +LA+ GV+ + F G ++Y G + + + + PP +
Sbjct: 106 VAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYY-GHSCNLTNNVVFQMFDPPVTNID 164
Query: 436 SAEQAKELIDANTVIVFGFF 495
+ +Q L DA V G+F
Sbjct: 165 NKKQRTLLEDAEGTKVVGYF 184
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 122 FETVITTTEYILVEFYAPWCGHCKSLAPEYAKAA-----TKLAEEESPIN*RKLTQLKNR 286
F+ + E ++F A WCG C+ + P++ + A K A+ + +N ++ ++ NR
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKFEEMAKEFKGVKCAKVDVDVNSVEVLRVDNR 63
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 301 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISWLKKKTG 414
+G+ +PTLK FR G P DY+G + + S++ + G
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESYIHDQLG 289
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 158 VEFYAPWCGHCKSLAPEYAKAATKL 232
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 95 NVLVLSKANFETVITTTEYILVEFYA 172
NV++L + NF+ VI + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 119 NFETVITTTEYIL--VEFYAPWCGHCKSLAPEYAKAATKLAEEESPIN*RKLTQLKNRI 289
+F+ +++++ +L V F+APW HC + +LA+E +N K ++ +RI
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM----NDVLEELAKENPHVNFIKNQKVVDRI 65
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 307 VRGYPTLKFFRNG-SPIDYSGGRQADDIISWL 399
+ GYPTL F++G +YSG R D + ++
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSLYRFI 32
>SB_50939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2337
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 198 WHRNT-PRQQQSW--LKKNLLSTSES*RNSRTGSRRELRCTRIPDSQILQEWXSYRLFR 365
WHR T P W L KN+ T + SR G+R+ L+ + IL ++ LF+
Sbjct: 1471 WHRLTIPSTMNDWPQLSKNVQLTVDDFNASRYGTRQALQQNYLDLQMILDKYNEKVLFK 1529
>SB_25427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1198
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 189 ANLWHRNTPRQQQSWLKKNLLSTSES*RNSRTGSR 293
+N H++TPR ++ W K+ S +E ++R SR
Sbjct: 91 SNAKHKDTPRPKEDWYKETQSSLAEELDDTRQRSR 125
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +1
Query: 244 ISYQLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 354
+S +L V T+E D + V G P T+K+F++G P+
Sbjct: 1039 LSSKLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1
Query: 336 EEFESRVSSYTVALGEILFLSCVNFR*LIGDSSSASFVAA 217
+E +R +S GEIL S N ++G SS SFVAA
Sbjct: 859 DEGRTRSNSTFTTAGEILTSSKANSGKVMGSKSSCSFVAA 898
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/15 (53%), Positives = 13/15 (86%)
Frame = +2
Query: 176 WCGHCKSLAPEYAKA 220
WCG CK+L P++A++
Sbjct: 8 WCGACKALRPKFAES 22
>SB_25578| Best HMM Match : ShTK (HMM E-Value=2.4e-06)
Length = 257
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 146 EYILVEFYAPWCGHCKSLAPEYAKAAT 226
+YI+ +F CG CK+LAP ++ T
Sbjct: 123 KYIMKKFCQKECGLCKALAPPICQSTT 149
>SB_40719| Best HMM Match : CUB (HMM E-Value=1.2e-07)
Length = 272
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 337 RNGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQS*PE 516
R+ +P+ +G DDI + L + PP E A E+ A+ +V G + ++ E
Sbjct: 173 RDLTPLPGNGVPTLDDIPAVLIAEDRPPTYSEAVEEDALEMTAADVAVVHGGHTGETDTE 232
Query: 517 P 519
P
Sbjct: 233 P 233
>SB_15718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -3
Query: 244 FFFSQLCCCLGVFRCQRFAVAAPWSIEFN*NVLRGCNYSFKVSFTQN 104
F F LC G + W+ E + N + GC+Y VS Q+
Sbjct: 147 FEFIDLCSGFGFVVLPTVVICTSWNQESHMNNITGCSYQKPVSTNQS 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,826,804
Number of Sequences: 59808
Number of extensions: 352501
Number of successful extensions: 888
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 883
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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