Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30111.Seq
(593 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 104 8e-28
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 89 2e-18
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 79 2e-15
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 79 3e-15
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 75 4e-14
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 73 1e-13
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 73 2e-13
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 68 5e-12
10_08_0620 - 19321612-19323237 60 2e-09
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 59 3e-09
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 55 4e-08
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 37 0.011
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 36 0.018
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 36 0.024
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 35 0.056
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 34 0.098
04_01_0006 - 112476-114182,114627-114676,115289-115463 28 4.9
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522... 28 4.9
05_03_0388 + 13401985-13402117,13404122-13404173,13405867-134059... 28 6.5
12_01_0559 + 4527769-4527924,4528038-4528129,4528799-4528905,452... 27 8.5
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 27 8.5
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 104 bits (250), Expect(2) = 8e-28
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ +EVEHPAAKVLVELA+LQD EVGDGTTSVVIIAAELLK ++LV+ KIHPTSIISGY
Sbjct: 19 LRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKRGNDLVRNKIHPTSIISGY 78
Query: 425 RL 430
RL
Sbjct: 79 RL 80
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/21 (85%), Positives = 21/21 (100%)
Frame = +3
Query: 192 MLVDDIGDVTVTNEGATILKM 254
MLVDDIGDVT+TN+GATIL+M
Sbjct: 1 MLVDDIGDVTITNDGATILRM 21
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +1
Query: 514 AKTTMSSKLIGADADFFSEMVVDAAQ 591
AKT+MSSKLI +D+DFF+ +VVDA Q
Sbjct: 137 AKTSMSSKLINSDSDFFANLVVDAVQ 162
Score = 36.7 bits (81), Expect(2) = 8e-28
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 422 YRLACKEAVKYIQDNLTVTVESLGRPSLITQPK 520
Y+LA +EA KY+++ L V V+ LG+ SLI K
Sbjct: 106 YQLAMREACKYVEEKLAVKVDKLGKDSLINCAK 138
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 89.0 bits (211), Expect = 2e-18
Identities = 37/63 (58%), Positives = 57/63 (90%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K++ +++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+GY
Sbjct: 64 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGY 123
Query: 425 RLA 433
R+A
Sbjct: 124 RMA 126
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = +3
Query: 102 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNEGATILK 251
G+ R + ++VK++LGP G+DK+L G VTVTN+GATILK
Sbjct: 14 GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILK 65
Score = 31.9 bits (69), Expect = 0.40
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +1
Query: 514 AKTTMSSKLIGADADFFSEMVVDA 585
A TT+SSK++ D ++F+E+ VDA
Sbjct: 156 AMTTLSSKILSQDKEYFAELAVDA 179
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 79.4 bits (187), Expect = 2e-15
Identities = 33/58 (56%), Positives = 52/58 (89%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIIS 418
+K++ +++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+
Sbjct: 65 LKSLHIDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 90 TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNEGATILK 251
T G+ R + + ++VK++LGP G+DK+L G VTVTN+GATILK
Sbjct: 11 TEEKGERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILK 66
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 514 AKTTMSSKLIGADADFFSEMVVDA 585
A TT+SSK++ D ++F+ + VDA
Sbjct: 133 AMTTLSSKILSQDKEYFAGLAVDA 156
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/77 (46%), Positives = 56/77 (72%)
Frame = +2
Query: 254 VEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 433
+++ HPAAK+LV++A+ QD EVGDGTT+VV++AAE LK A ++ +HP S+I YR A
Sbjct: 72 LDIIHPAAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTA 131
Query: 434 CKEAVKYIQDNLTVTVE 484
A++ ++D L ++E
Sbjct: 132 GHLAIEKVKD-LATSIE 147
Score = 44.0 bits (99), Expect = 9e-05
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +3
Query: 123 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILKM 254
N+ + V+++LGP G+DK++ DD G T++N+GATI+++
Sbjct: 28 NINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRL 71
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 514 AKTTMSSKLIGADADFFSEMVVDA 585
A TT+SSKLIG + +FF+ MVVDA
Sbjct: 162 AATTLSSKLIGGEKEFFASMVVDA 185
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/88 (37%), Positives = 58/88 (65%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ +++ HPAAK ++EL++ QDEEVGDGTTSV+++A E+L A+ + HPT I Y
Sbjct: 67 LREIDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAY 126
Query: 425 RLACKEAVKYIQDNLTVTVESLGRPSLI 508
A ++A+ + D + + V+ R +++
Sbjct: 127 TKALEDALA-VLDKIAMHVDVNDRAAML 153
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 93 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
R G V N+ +I++++LGP + KML+D G + VTN+G IL+
Sbjct: 16 RESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILR 68
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 73.3 bits (172), Expect = 1e-13
Identities = 31/73 (42%), Positives = 48/73 (65%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+ +EV+HPAAK+LV + Q EE+GDG + A ELL+ A+EL++ +HP+ II GY
Sbjct: 68 VNELEVQHPAAKILVLAGRAQQEEIGDGANLTISFAGELLEKAEELIRMGLHPSEIIIGY 127
Query: 425 RLACKEAVKYIQD 463
A + V+ ++D
Sbjct: 128 TKAINKTVEILED 140
Score = 35.5 bits (78), Expect = 0.032
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +3
Query: 153 IVKSSLGPVGLDKMLVDDIGDVTVTNEGATIL 248
I ++SLGP G++KM+++ + + VTN+ ATI+
Sbjct: 37 ITRTSLGPNGMNKMVINHLDKLFVTNDAATIV 68
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/88 (37%), Positives = 56/88 (63%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ +++ HPAAK ++EL++ QDEEVGDGTTSV+++A E+L A + HPT I Y
Sbjct: 67 LRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAY 126
Query: 425 RLACKEAVKYIQDNLTVTVESLGRPSLI 508
A +A+ + D + + V+ R +++
Sbjct: 127 TKALDDALS-VLDKIAIPVDVDDRVAML 153
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 93 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
R G V N+ +I++++LGP + KML+D G + VTN+G IL+
Sbjct: 16 RESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILR 68
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 68.1 bits (159), Expect = 5e-12
Identities = 30/72 (41%), Positives = 51/72 (70%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ ++V++ AK++VEL+ QD E+GDGTT VV++A LL+ A++L++ IHP I GY
Sbjct: 74 LEQMDVDNQIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGY 133
Query: 425 RLACKEAVKYIQ 460
LA + A +++
Sbjct: 134 ELASRIAFDHLE 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 90 TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
+R G + N+ I+++SLGP G+DKML GDVT+TN+GATIL+
Sbjct: 22 SRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILE 75
>10_08_0620 - 19321612-19323237
Length = 541
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +2
Query: 269 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 448
PAA++L +L++ QD GDGTT+VV++A LL+ A L+ HPT+ L AV
Sbjct: 84 PAARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAV 143
Query: 449 KYIQDNLTVTVESLGRPSLI 508
+ + + + VE R +L+
Sbjct: 144 EVLH-GMAIPVELSDRDALV 162
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +3
Query: 105 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI--GD--VTVTNEGATIL 248
D VR N+ ++SLGP G+DKM+ GD V +TN+GATIL
Sbjct: 25 DDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATIL 76
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+ + + PAA++L EL++ QD GDGTT+VV++A LL+ A L+ HPT+
Sbjct: 72 LSRMSLLQPAARMLAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADAL 131
Query: 425 RLACKEAVKYIQDNLTVTVESLGRPSLI 508
AV+ + + + +E R SL+
Sbjct: 132 HRLATRAVEVLH-AMAIPIELSDRDSLV 158
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +3
Query: 105 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILKMWKWSILLP 278
D VR N+ + V++SLGP G+DKM+ +V +TN+GATIL + S+L P
Sbjct: 25 DDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILS--RMSLLQP 80
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/79 (27%), Positives = 46/79 (58%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K +++++P A ++ A QD+ GDGTTS V+ EL+K ++ + HP ++ G+
Sbjct: 63 LKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGF 122
Query: 425 RLACKEAVKYIQDNLTVTV 481
+A + +++++ T V
Sbjct: 123 DVAKRATLEFLEKFKTSVV 141
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 123 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
N+ +++K++LGP G KMLV GD+ +T +G T+LK
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLK 64
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +2
Query: 248 KNVEVEHPA----AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSII 415
K VE+E P AK++ + A ++ GDGTT+ V++A ++ ++V +P I
Sbjct: 110 KEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKVVAAGANPVQIT 169
Query: 416 SGYRLACKEAVKYIQ 460
G K V +Q
Sbjct: 170 RGIEKTAKALVSELQ 184
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 260 VEHPAAKVLVE----LAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYR 427
VEH A +L E +A + VGDGTT+ +I+A E++ V T +P ++ G
Sbjct: 624 VEHAGAMLLQEHVNQIASKTNSSVGDGTTTAIILAREIINLGLLAVATGANPVALRKGID 683
Query: 428 LACKEAV 448
A E +
Sbjct: 684 KAVHELI 690
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +2
Query: 260 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 439
VE+ AK++ + A ++ GDGTT+ V++A L+ ++V +P I G K
Sbjct: 122 VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAK 181
Query: 440 EAVKYIQ 460
V+ ++
Sbjct: 182 ALVEELK 188
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 260 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 421
+E+ A ++ E+A ++ GDGTT+ ++A E++K V + +P SI G
Sbjct: 106 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKG 159
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 260 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 421
+E+ A ++ E+A ++ GDGTT+ ++A E++K V + +P S+ G
Sbjct: 101 MENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKG 154
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 122 LCSHWVSAGSCPCYRQRCSYSRHF 51
+CSH V G+ + CS+S HF
Sbjct: 80 VCSHGVKTGAAAVFTAECSHSFHF 103
>03_03_0113 +
14550435-14550822,14550831-14551660,14552105-14552278,
14552350-14552517
Length = 519
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 350 AAELLKNADELVKTKIHPTSIISGYRLACK 439
AAEL + E + +++ P SI++G R ACK
Sbjct: 6 AAELPDDIVEKIISRLPPRSIVTGCRAACK 35
>05_03_0388 +
13401985-13402117,13404122-13404173,13405867-13405982,
13406080-13406247,13407047-13407255
Length = 225
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 401 PTSIISGYRLACKEAVKYIQDNLTVTVESLGRPSLITQPKQPCH 532
P+ L+C VK+ +DNL + IT+PK P H
Sbjct: 51 PSDYYGTITLSCSRRVKWNEDNLYEIESNKPVRQKITEPKTPYH 94
>12_01_0559 +
4527769-4527924,4528038-4528129,4528799-4528905,
4528987-4529042,4529196-4529346,4530223-4530528,
4530753-4531597
Length = 570
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 125 CNGSSGYSKHSKELPWASWS 184
C G G S K +PW+SW+
Sbjct: 13 CGGGGGLSTGRKLVPWSSWA 32
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/63 (20%), Positives = 29/63 (46%)
Frame = +2
Query: 260 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 439
V++ A ++ ++A ++ GDGTT ++ + + V ++ + G +A
Sbjct: 135 VKNVGASLVKQVANATNDTAGDGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVD 194
Query: 440 EAV 448
E V
Sbjct: 195 EVV 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,948
Number of Sequences: 37544
Number of extensions: 298326
Number of successful extensions: 747
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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