Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30111.Seq
(593 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 146 1e-35
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 146 1e-35
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 87 9e-18
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 87 9e-18
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 87 9e-18
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 83 1e-16
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 77 9e-15
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 77 9e-15
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 77 9e-15
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 69 2e-12
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 69 2e-12
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 69 2e-12
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 65 4e-11
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 58 6e-09
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 58 6e-09
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 32 0.27
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 31 0.62
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 30 1.4
Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical p... 28 5.8
Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical p... 28 5.8
AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical ... 27 7.6
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 146 bits (354), Expect = 1e-35
Identities = 68/92 (73%), Positives = 81/92 (88%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K +EVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 425 RLACKEAVKYIQDNLTVTVESLGRPSLITQPK 520
RLACKEAVKYI +N++ T +S+GR S++ K
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSVVNAAK 157
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +3
Query: 75 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTN+GATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +1
Query: 508 HTAKTTMSSKLIGADADFFSEMVVDAAQ 591
+ AKT+MSSK+IG DADFF E+VVDAA+
Sbjct: 154 NAAKTSMSSKIIGPDADFFGELVVDAAE 181
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 146 bits (354), Expect = 1e-35
Identities = 68/92 (73%), Positives = 81/92 (88%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K +EVEHPA KVLVELAQLQDEEVGDGTTSVVI+AAELLK ADELVK K+HPT+II+GY
Sbjct: 66 LKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGY 125
Query: 425 RLACKEAVKYIQDNLTVTVESLGRPSLITQPK 520
RLACKEAVKYI +N++ T +S+GR S++ K
Sbjct: 126 RLACKEAVKYISENISFTSDSIGRQSVVNAAK 157
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +3
Query: 75 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
L++ G R+ G +R+QNV NIVKSSLGPVGLDKMLVDD+GDV VTN+GATILK
Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILK 67
Score = 46.0 bits (104), Expect = 2e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +1
Query: 508 HTAKTTMSSKLIGADADFFSEMVVDAAQ 591
+ AKT+MSSK+IG DADFF E+VVDAA+
Sbjct: 154 NAAKTSMSSKIIGPDADFFGELVVDAAE 181
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/63 (61%), Positives = 53/63 (84%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K++ V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 425 RLA 433
R A
Sbjct: 128 RRA 130
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 102 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNEGATILK 251
G+ R + + ++VKS+LGP G+DK+L+ + G + VTN+GATILK
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/63 (61%), Positives = 53/63 (84%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K++ V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 425 RLA 433
R A
Sbjct: 128 RRA 130
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 102 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNEGATILK 251
G+ R + + ++VKS+LGP G+DK+L+ + G + VTN+GATILK
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 87.0 bits (206), Expect = 9e-18
Identities = 39/63 (61%), Positives = 53/63 (84%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K++ V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A++LV +IHP +IISGY
Sbjct: 68 LKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGY 127
Query: 425 RLA 433
R A
Sbjct: 128 RRA 130
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = +3
Query: 102 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLV----DDIGDVTVTNEGATILK 251
G+ R + + ++VKS+LGP G+DK+L+ + G + VTN+GATILK
Sbjct: 16 GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILK 69
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 83.0 bits (196), Expect = 1e-16
Identities = 34/80 (42%), Positives = 58/80 (72%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ + V+HPAAK ++E+A+ QDEE GDGTTSV+I+A E++ +A ++ K HPT II Y
Sbjct: 69 LREITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAY 128
Query: 425 RLACKEAVKYIQDNLTVTVE 484
R A ++ +++ ++ + TV+
Sbjct: 129 RQALEDMIQWSENKFSKTVD 148
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 75 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
LS R G V+ N+ +++++SLGP + KML+D +G + +TN+G IL+
Sbjct: 12 LSQGTKRESGHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILR 70
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 9e-15
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 425 RLACKEAVK 451
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +3
Query: 150 NIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
N +++SLGP GLDKMLV GDVT+TN+GATI++
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 77.0 bits (181), Expect = 9e-15
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 425 RLACKEAVK 451
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +3
Query: 150 NIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
N +++SLGP GLDKMLV GDVT+TN+GATI++
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 77.0 bits (181), Expect = 9e-15
Identities = 32/69 (46%), Positives = 52/69 (75%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A++L+ IHP I G+
Sbjct: 79 MEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGF 138
Query: 425 RLACKEAVK 451
LACK+A++
Sbjct: 139 DLACKKALE 147
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/34 (64%), Positives = 29/34 (85%)
Frame = +3
Query: 150 NIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
N +++SLGP GLDKMLV GDVT+TN+GATI++
Sbjct: 47 NTLRTSLGPRGLDKMLVSPDGDVTITNDGATIME 80
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+ + V HP AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 425 RLACKEAVKYIQD 463
+ A EA K + +
Sbjct: 137 QSAAAEAEKILDE 149
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 105 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATIL 248
+ VR N++ + V++SLGP G+DKM+ GDVT+TN+GATIL
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 69.3 bits (162), Expect = 2e-12
Identities = 33/73 (45%), Positives = 47/73 (64%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+ + V HP AK+LVEL++ QD E GDGTT+VV++A LL A L+ IHPT+I +
Sbjct: 77 LNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESF 136
Query: 425 RLACKEAVKYIQD 463
+ A EA K + +
Sbjct: 137 QSAAAEAEKILDE 149
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 105 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATIL 248
+ VR N++ + V++SLGP G+DKM+ GDVT+TN+GATIL
Sbjct: 30 ESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATIL 77
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/73 (41%), Positives = 49/73 (67%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K +++ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 425 RLACKEAVKYIQD 463
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = +3
Query: 156 VKSSLGPVGLDKMLVDDIGDVTVTNEGATILKM 254
++++LGP GLDK++VD G T++N+GATILK+
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKL 68
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 514 AKTTMSSKLIGADADFFSEMVVDA 585
A TT+SSKL+ + FF+ M+VDA
Sbjct: 157 AATTLSSKLVSQERLFFANMIVDA 180
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/73 (41%), Positives = 49/73 (67%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K +++ PAA +V++A+ QD EVGDGTTSVV++AAE+LK ++ +HP +I
Sbjct: 66 LKLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAI 125
Query: 425 RLACKEAVKYIQD 463
AC++ +K + D
Sbjct: 126 GKACEKTLKNLAD 138
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/33 (54%), Positives = 28/33 (84%)
Frame = +3
Query: 156 VKSSLGPVGLDKMLVDDIGDVTVTNEGATILKM 254
++++LGP GLDK++VD G T++N+GATILK+
Sbjct: 36 IRTTLGPRGLDKLIVDSKGATTISNDGATILKL 68
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 514 AKTTMSSKLIGADADFFSEMVVDA 585
A TT+SSKL+ + FF+ M+VDA
Sbjct: 157 AATTLSSKLVSQERLFFANMIVDA 180
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 64.9 bits (151), Expect = 4e-11
Identities = 24/71 (33%), Positives = 51/71 (71%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+K +E++HPAA++++ ++Q++++GD T +VVI+AA LL++A L+ + P + +GY
Sbjct: 72 LKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGY 131
Query: 425 RLACKEAVKYI 457
A ++A++ +
Sbjct: 132 EQAAEKALEIL 142
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 105 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATILK 251
D +N+ + ++S+ GP G++KM+++ I + VTN+ ATILK
Sbjct: 25 DEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFVTNDAATILK 73
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 57.6 bits (133), Expect = 6e-09
Identities = 23/72 (31%), Positives = 43/72 (59%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+ + ++HP A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+
Sbjct: 64 LHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Query: 425 RLACKEAVKYIQ 460
A + ++ ++
Sbjct: 124 EWANTKTLELLE 135
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 123 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATIL 248
N+ ++++S+LGP G KMLV GD+ +T +G +L
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 57.6 bits (133), Expect = 6e-09
Identities = 23/72 (31%), Positives = 43/72 (59%)
Frame = +2
Query: 245 IKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGY 424
+ + ++HP A ++ + + QD+ GDGTTS V++ ELLK A+ LV +HP + G+
Sbjct: 64 LHEMAIQHPTASMIAKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGF 123
Query: 425 RLACKEAVKYIQ 460
A + ++ ++
Sbjct: 124 EWANTKTLELLE 135
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 123 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNEGATIL 248
N+ ++++S+LGP G KMLV GD+ +T +G +L
Sbjct: 23 NISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLL 64
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 275 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVK 388
AK++ ++A +EE GDGTT ++A + K E ++
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLARAIAKEGFESIR 123
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.62
Identities = 21/80 (26%), Positives = 36/80 (45%)
Frame = +2
Query: 233 RCHNIKNVEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSI 412
+C + V + P A +A +E+GDG V ++A+E+ N E+ KT++ S
Sbjct: 78 KCMAGRAVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASEVFSN--EVKKTEVLMRSF 135
Query: 413 ISGYRLACKEAVKYIQDNLT 472
L KE + +T
Sbjct: 136 RRAIGLRVKETKDVYEGEVT 155
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 275 AKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 448
AK++ ++A +EE GDGTT ++ + K E ++ + I G A + V
Sbjct: 86 AKLIQDVANKANEEAGDGTTCATVLTRAIAKEGFERHSSRGNAVEIRRGVMNAVEVVV 143
>Z96047-10|CAH04703.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 242 CGTFVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYIL 120
CG V C+I IVN +L++ W G L Y+ S Y+L
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>Z80215-19|CAH19104.1| 195|Caenorhabditis elegans Hypothetical
protein DY3.8 protein.
Length = 195
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -1
Query: 242 CGTFVSDCNIPNIVNQHLIQTNWPKGALYYVCYSRCCHYIL 120
CG V C+I IVN +L++ W G L Y+ S Y+L
Sbjct: 71 CGMAV--CSIIVIVNHYLLEKKWVWGGLLYL--SNIMFYVL 107
>AL021175-5|CAA15967.1| 357|Caenorhabditis elegans Hypothetical
protein Y6E2A.6 protein.
Length = 357
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 117 FSLGLRRILSLLQTKVQL*STFFIVFLTQNSL 22
F L ILS +QT V + TF IVF T ++
Sbjct: 14 FYLRASHILSCIQTPVNIFGTFIIVFKTPKNM 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,185,961
Number of Sequences: 27780
Number of extensions: 258110
Number of successful extensions: 612
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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