Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30110.Seq
(444 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for ... 126 5e-29
BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31 p... 126 5e-29
BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein. 126 5e-29
BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31 p... 126 5e-29
AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein. 126 5e-29
AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31 p... 126 5e-29
X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31 pro... 124 1e-28
AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31 p... 54 2e-07
BC060867-1|AAH60867.1| 979|Homo sapiens KIAA0746 protein protein. 29 9.6
BC009945-1|AAH09945.2| 702|Homo sapiens KIAA0746 protein protein. 29 9.6
AB018289-1|BAA34466.1| 1029|Homo sapiens KIAA0746 protein protein. 29 9.6
>X15940-1|CAA34066.1| 125|Homo sapiens protein ( Human mRNA for
ribosomal protein L31. ).
Length = 125
Score = 126 bits (303), Expect = 5e-29
Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 217
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 218 VDTRLNKFLWSK 253
+DTRLNK +W+K
Sbjct: 64 IDTRLNKAVWAK 75
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070373-1|AAH70373.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 126 bits (303), Expect = 5e-29
Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 217
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 218 VDTRLNKFLWSK 253
+DTRLNK +W+K
Sbjct: 64 IDTRLNKAVWAK 75
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>BC070210-1|AAH70210.1| 121|Homo sapiens RPL31 protein protein.
Length = 121
Score = 126 bits (303), Expect = 5e-29
Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 217
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 218 VDTRLNKFLWSK 253
+DTRLNK +W+K
Sbjct: 64 IDTRLNKAVWAK 75
Score = 48.8 bits (111), Expect = 8e-06
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIK 372
G+RNVP+ N+DEDS +KL+TLVTYVPV + K
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115
>BC017343-1|AAH17343.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 126 bits (303), Expect = 5e-29
Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 217
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 218 VDTRLNKFLWSK 253
+DTRLNK +W+K
Sbjct: 64 IDTRLNKAVWAK 75
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AC016738-2|AAY14823.1| 125|Homo sapiens unknown protein.
Length = 125
Score = 126 bits (303), Expect = 5e-29
Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 217
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 218 VDTRLNKFLWSK 253
+DTRLNK +W+K
Sbjct: 64 IDTRLNKAVWAK 75
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>AB061830-1|BAB79468.1| 125|Homo sapiens ribosomal protein L31
protein.
Length = 125
Score = 126 bits (303), Expect = 5e-29
Identities = 56/72 (77%), Positives = 67/72 (93%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 217
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 218 VDTRLNKFLWSK 253
+DTRLNK +W+K
Sbjct: 64 IDTRLNKAVWAK 75
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 76 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>X69181-1|CAA48925.1| 121|Homo sapiens ribosomal protein L31
protein.
Length = 121
Score = 124 bits (299), Expect = 1e-28
Identities = 55/71 (77%), Positives = 66/71 (92%), Gaps = 1/71 (1%)
Frame = +2
Query: 44 KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 220
K GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+
Sbjct: 1 KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 60
Query: 221 DTRLNKFLWSK 253
DTRLNK +W+K
Sbjct: 61 DTRLNKAVWAK 71
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 253 GVRNVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
G+RNVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 72 GIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119
>AB007180-1|BAA25839.1| 47|Homo sapiens ribosomal protein L31
protein.
Length = 47
Score = 54.4 bits (125), Expect = 2e-07
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +1
Query: 262 NVPFXXXXXXXXXXNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 396
NVP+ N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 1 NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45
>BC060867-1|AAH60867.1| 979|Homo sapiens KIAA0746 protein protein.
Length = 979
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 32 ITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVG-----FKKRAPRAIKEIRKFAEKQ 196
I + K +G +K + E++ + + LH+ ++G+G FKK +A K K ++
Sbjct: 582 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLK--AEE 639
Query: 197 MGTPD 211
MG PD
Sbjct: 640 MGNPD 644
>BC009945-1|AAH09945.2| 702|Homo sapiens KIAA0746 protein protein.
Length = 702
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 32 ITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVG-----FKKRAPRAIKEIRKFAEKQ 196
I + K +G +K + E++ + + LH+ ++G+G FKK +A K K ++
Sbjct: 305 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLK--AEE 362
Query: 197 MGTPD 211
MG PD
Sbjct: 363 MGNPD 367
>AB018289-1|BAA34466.1| 1029|Homo sapiens KIAA0746 protein protein.
Length = 1029
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 32 ITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVG-----FKKRAPRAIKEIRKFAEKQ 196
I + K +G +K + E++ + + LH+ ++G+G FKK +A K K ++
Sbjct: 632 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLK--AEE 689
Query: 197 MGTPD 211
MG PD
Sbjct: 690 MGNPD 694
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,938,132
Number of Sequences: 237096
Number of extensions: 1054841
Number of successful extensions: 5579
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5579
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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