Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30109.Seq
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 171 1e-41
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 150 3e-35
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 138 8e-32
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 125 8e-28
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 115 1e-24
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 109 8e-23
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 101 2e-20
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 97 2e-19
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 93 7e-18
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 93 7e-18
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 91 3e-17
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 81 2e-14
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 79 1e-13
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 75 1e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 72 1e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 71 2e-11
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 71 3e-11
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 69 7e-11
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 62 1e-08
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 62 1e-08
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 57 4e-07
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 52 2e-05
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 49 9e-05
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 49 1e-04
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 2e-04
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 48 3e-04
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 48 3e-04
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 46 8e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 42 0.010
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 39 0.12
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.37
UniRef50_Q5WFH3 Cluster: Sporulation sigma-E factor processing p... 36 1.1
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_UPI0000F208C3 Cluster: PREDICTED: similar to RIKEN cDNA... 35 2.0
UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, L... 34 2.6
UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3; ... 34 2.6
UniRef50_Q0TVL0 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 34 3.4
UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; ... 33 4.5
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 6.0
UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus cabal... 33 6.0
UniRef50_A7RGT3 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.0
UniRef50_Q5XJ41 Cluster: Zgc:103708; n=1; Danio rerio|Rep: Zgc:1... 33 7.9
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 7.9
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 7.9
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 171 bits (416), Expect = 1e-41
Identities = 79/85 (92%), Positives = 83/85 (97%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
RVRKNTEARRKGRHCGFGKR+GTA
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTA 85
Score = 121 bits (292), Expect = 1e-26
Identities = 59/89 (66%), Positives = 64/89 (71%)
Frame = +3
Query: 243 KRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 422
K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY
Sbjct: 82 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141
Query: 423 IHRKKAEKARTKMLSDQAEARRNKVKEAR 509
IH+KKAEK R+KML+DQAEARR KV+EAR
Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVREAR 170
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 150 bits (363), Expect = 3e-35
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 4e-25
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 138 bits (335), Expect = 8e-32
Identities = 63/77 (81%), Positives = 69/77 (89%)
Frame = +1
Query: 25 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 204
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 205 ARRKGRHCGFGKRRGTA 255
ARRKGRH G GKR+GTA
Sbjct: 61 ARRKGRHMGIGKRKGTA 77
Score = 102 bits (244), Expect = 9e-21
Identities = 48/90 (53%), Positives = 60/90 (66%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEA 482
FKNKR+LME+IH+ KA+KAR K+L+DQAEA
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQAEA 153
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 125 bits (302), Expect = 8e-28
Identities = 57/85 (67%), Positives = 68/85 (80%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
+R RKN ARRKGRH G GKR+GTA
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRKGTA 85
Score = 100 bits (240), Expect = 3e-20
Identities = 49/101 (48%), Positives = 64/101 (63%)
Frame = +3
Query: 243 KRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 422
K +ARMPQK LW A KID+HLYH LY + KGN FKNKRVL+++
Sbjct: 82 KGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDH 141
Query: 423 IHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRRR 545
IH+KKAE+ R K LSDQAEA R + +E+R ++ L R++
Sbjct: 142 IHKKKAERLRAKQLSDQAEAMRQRKRESRVNRQHRLEERKK 182
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 115 bits (276), Expect = 1e-24
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 181 ARVRKNTEARRKGRHCGFGKRRGT 252
AR RK EA+ GRH G G+R G+
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRREGS 104
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/88 (45%), Positives = 55/88 (62%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 437
ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E+IH+ K
Sbjct: 107 ARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEHIHKIK 166
Query: 438 AEKARTKMLSDQAEARRNKVKEARSAAR 521
EK + + L++Q A+ + ++ R+ AR
Sbjct: 167 NEKKKERQLAEQLAAKHLRDEQNRNKAR 194
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 109 bits (261), Expect = 8e-23
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
A KNT KGRH GK +GTA
Sbjct: 61 AHCEKNT---LKGRHMVIGKGKGTA 82
Score = 80.6 bits (190), Expect = 3e-14
Identities = 42/123 (34%), Positives = 66/123 (53%)
Frame = +3
Query: 201 RGT*KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 380
+ T KG + + K N +P++ W +KKID H+ HSLY++
Sbjct: 65 KNTLKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRV 124
Query: 381 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRRRNCCRP 560
K NVFKN+ +LME IH+ KA+KA K+L+DQ + + +K K+A+ +P R+ P
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQGDVQSSKSKDAQKLREEQVPTRQHKFQFP 184
Query: 561 SLE 569
L+
Sbjct: 185 FLK 187
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 101 bits (241), Expect = 2e-20
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 437
AR+P K LW AKKID+H+YHS+Y+K KGNVFKNKRVLME IH+ K
Sbjct: 107 ARLPTKVLWLRRHRVLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSK 166
Query: 438 AEKARTKMLSDQAEARRNKVKEAR 509
AEKAR K L+DQ EARR K K R
Sbjct: 167 AEKAREKSLADQFEARRAKNKAVR 190
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 165
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 166 ---------------AVHSRARVRKNTEARRKGRHCGFGKRRGT 252
+HSRAR + A+R GRH G+GKRRGT
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGT 104
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGT 252
R+R E + GRH G GKR+G+
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRKGS 84
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +3
Query: 255 NARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 434
N+R K +W + K++RHLY SLY+K+KGNVFKNK++L E+IH+
Sbjct: 86 NSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEFIHKA 145
Query: 435 KAEKARTKMLSDQAEARRNKVK 500
K E+ R + D+ + R K K
Sbjct: 146 KNEQKRKEEFLDKFKLMREKKK 167
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 92.7 bits (220), Expect = 7e-18
Identities = 48/111 (43%), Positives = 66/111 (59%)
Frame = +3
Query: 177 PRPCPQKHRGT*KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 356
P +KH G +G + E+ NARM +K W +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 357 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAR 509
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ EARR+K K+AR
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQTEARRSKTKKAR 625
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 92.7 bits (220), Expect = 7e-18
Identities = 36/83 (43%), Positives = 63/83 (75%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRG 249
R R E ++KGRH G G R+G
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKG 83
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/65 (36%), Positives = 30/65 (46%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 437
ARM +KELW KKIDR Y LY++AKG FK+K L ++
Sbjct: 87 ARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHN 146
Query: 438 AEKAR 452
K R
Sbjct: 147 LLKKR 151
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 90.6 bits (215), Expect = 3e-17
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
R RK EA++KGRH G GKR GTA
Sbjct: 61 GRCRKRLEAKKKGRHMGTGKRFGTA 85
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +3
Query: 255 NARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 434
NARMPQK++W +I + + Y +AKG++FK++ + + I ++
Sbjct: 86 NARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFKHRFHMKDCIIKR 145
Query: 435 KAEKARTKMLSDQAEA 482
KA++ R K L++QA+A
Sbjct: 146 KADEQRAKELAEQAKA 161
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGT 252
R+R A+R GRH G GKRRGT
Sbjct: 61 GRIRARHAAKRLGRHSGHGKRRGT 84
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/82 (43%), Positives = 47/82 (57%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 437
ARMP K LW +KIDRHLY +LY KAKGN+FKNKRVL+E+I +
Sbjct: 87 ARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEHIVGMQ 146
Query: 438 AEKARTKMLSDQAEARRNKVKE 503
E+ K ++ E RR K ++
Sbjct: 147 KEQELEKKKKEELEQRRKKAEQ 168
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 78.6 bits (185), Expect = 1e-13
Identities = 34/82 (41%), Positives = 56/82 (68%)
Frame = +1
Query: 10 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 189
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 190 RKNTEARRKGRHCGFGKRRGTA 255
+K E R+KGR G G RRG A
Sbjct: 66 KKLKEQRKKGRRRGPGSRRGAA 87
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 437
AR P KE W + KIDR +Y LY AKG F+++ L Y+ +
Sbjct: 89 ARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHE 148
Query: 438 AEK 446
K
Sbjct: 149 LLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 74.9 bits (176), Expect = 1e-12
Identities = 31/77 (40%), Positives = 52/77 (67%)
Frame = +1
Query: 19 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 198
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 199 TEARRKGRHCGFGKRRG 249
E ++KGR G G R+G
Sbjct: 66 HEKKKKGRRRGPGSRKG 82
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 434
AR K W K ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 86 ARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +1
Query: 25 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 195
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 71.7 bits (168), Expect = 1e-11
Identities = 42/96 (43%), Positives = 56/96 (58%)
Frame = +1
Query: 13 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 192
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 193 KNTEARRKGRHCGFGKRRGTAMRVCHRRNYGYKDKG 300
T ARR+G H G KR+GT +R Y K KG
Sbjct: 90 --TLARRRGWHMGIRKRKGTIDYHLYRSLY-LKVKG 122
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = +3
Query: 342 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 506
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQAEARR K KEA
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQAEARRCKTKEA 164
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRG 249
R R E R G G G R+G
Sbjct: 61 GRARSRAEKRAYGHRKGPGSRKG 83
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 70.5 bits (165), Expect = 3e-11
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +3
Query: 330 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAR 509
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ QAEARR+K +EA
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSKTEEAH 117
Query: 510 SAARNVLPPRRRNCCR--PSLEKTKPRLPLRSKHYVVNN 620
L ++ K + +LPL + ++ +
Sbjct: 118 KGCEERLQAKKEEIIETVQGGRKQEIKLPLFGREPIIED 156
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA-MRVCHRRNY 282
R R+ G G G R+G A R +R Y
Sbjct: 61 GRARERDAKESYGHKKGAGSRKGKAGARQNEKREY 95
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +1
Query: 22 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 201
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 202 EARRKGRHCGFGKRRGT 252
E KGR G G RGT
Sbjct: 67 EQLAKGRRRGEGSVRGT 83
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Frame = +1
Query: 19 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
+R RK + KGR G G R+G+A
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRKGSA 90
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/94 (40%), Positives = 48/94 (51%)
Frame = -2
Query: 449 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 270
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + + L
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRHRILILLIQVTFS 124
Query: 269 WHTRIAVPLLLPKPQ*RPFLRASVFLRTRAREWT 168
+AVP L P PF R+ VF R RAREWT
Sbjct: 125 GIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 186
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 187 VRKNTEARRKGRHCGFGKRRGTA 255
+ RRKGR G G+R+G A
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVA 86
Score = 35.1 bits (77), Expect = 1.5
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +3
Query: 195 KHRGT*KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 374
+H KG + K AR+ KE W + IDR Y LYM
Sbjct: 67 RHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
Query: 375 KAKGNVFKNKRVLMEYI 425
AKG F++ L Y+
Sbjct: 127 LAKGGTFRDLASLKRYM 143
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 49.2 bits (112), Expect = 9e-05
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -2
Query: 503 LLYFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSV 324
LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E ++ +P++L +V
Sbjct: 63 LLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTV 122
Query: 323 LQEQFS*NPLSLYP*FLLWHTRI 255
+Q + + L+L P L HT +
Sbjct: 123 PAQQATEDTLALNPESLRRHTSL 145
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +1
Query: 22 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 201
+ A ++ K ++ + + ++ +R ++R ++K+GL+ KP +SR R R
Sbjct: 4 RETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITH 63
Query: 202 EARRKGRHCGFGKRRGT 252
E R+ GR G G RRGT
Sbjct: 64 EKRKSGRRRGRGSRRGT 80
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 7 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 186
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 187 VR-KNTEARRKGRHCGFGKRRGTAMRVCHRRNY 282
+ K + ++G G K+ RV ++ Y
Sbjct: 64 AQHKRRQKAKRGSKAG-SKQGRMGARVGKKQVY 95
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/82 (26%), Positives = 45/82 (54%)
Frame = +1
Query: 7 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 186
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 187 VRKNTEARRKGRHCGFGKRRGT 252
+ ++ G G G+R+GT
Sbjct: 62 KKLRKAKKQSGLKRGIGRRKGT 83
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +1
Query: 22 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 201
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 202 EARRKGRHCGFGKRRG 249
++KGR G G R+G
Sbjct: 65 IKKKKGRRRGHGSRKG 80
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 177
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 178 RARVRKNTEARR-KGRHCGFGKRRG 249
R+++ + R K G R+G
Sbjct: 60 GGRLKERRKKRSLKSEGKKSGSRKG 84
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 258 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 398
AR K++W K IDRH Y LY+K KG +K
Sbjct: 88 ARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 336 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 446
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 28 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 159
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -1
Query: 162 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 46
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 42.3 bits (95), Expect = 0.010
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = -1
Query: 276 PSVAYAHC-STSSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDHLTDVLSGVGV 100
P + Y + ST L A + L + VF+ G+D ++ LDD+ I D ++D+L GVG+
Sbjct: 100 PLLGYQNVGSTLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGI 159
Query: 99 CDLI 88
D I
Sbjct: 160 GDFI 163
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +1
Query: 7 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 186
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 187 VRKNTEARRKGRHCGFGKRRG 249
+ +A+R R G ++G
Sbjct: 64 A-QTKKAQRNKRGTKQGSKQG 83
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 372 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 494
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>UniRef50_Q5WFH3 Cluster: Sporulation sigma-E factor processing
peptidase; n=1; Bacillus clausii KSM-K16|Rep:
Sporulation sigma-E factor processing peptidase -
Bacillus clausii (strain KSM-K16)
Length = 297
Score = 35.5 bits (78), Expect = 1.1
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Frame = -3
Query: 547 FLLLGGNTFLAALRASFTLLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLPFAFM* 368
+LL G +L + L RR S W L + L S M++ + LFLN +
Sbjct: 9 WLLNAGIDYLLLAATALLLKRRFSQWRLVLAALFASLIVFLMFTPAAPLFLNPVIKLI-- 66
Query: 367 SEWYRCLSIFLAVLYFR-SNFLRTLCLCTHSSFC---GIRALQYLFSYQSHSDDPFYVPL 200
Y L +F+A Y R S FL+ L +F G+ A+ Y F +++ D ++P
Sbjct: 67 ---YSGLIVFIAFGYKRFSFFLQNLASFYFVTFVTGGGLFAMHYFF--ETNVDVLAFLP- 120
Query: 199 CFCGHGRGSGLL 164
GHG G ++
Sbjct: 121 ---GHGVGGSMV 129
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.5
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +1
Query: 19 QKRLAASVMRCGKKKVWLDPNEINEIAN 102
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_UPI0000F208C3 Cluster: PREDICTED: similar to RIKEN cDNA
2810004N23 gene; n=1; Danio rerio|Rep: PREDICTED:
similar to RIKEN cDNA 2810004N23 gene - Danio rerio
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +3
Query: 369 YMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRRRN 548
Y K + VF+ +R +M K + K+ Q + R+ K KE A+ L +RR
Sbjct: 138 YQKQQQRVFEEERAIMLGARPPKKQYVNYKVYQQQLKERKMKEKEE---AKPELQKKRRK 194
Query: 549 CCRPSLEKTKP 581
+P EK+KP
Sbjct: 195 EGKPRTEKSKP 205
>UniRef50_A6TUQ5 Cluster: Signal transduction histidine kinase, LytS
precursor; n=1; Alkaliphilus metalliredigens QYMF|Rep:
Signal transduction histidine kinase, LytS precursor -
Alkaliphilus metalliredigens QYMF
Length = 572
Score = 34.3 bits (75), Expect = 2.6
Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Frame = -3
Query: 592 SGKRGFVFSSEGLQQFLLLGGNTFLAALRASF---TLLRRASAWSLSIFVLAFSAFFLWM 422
+G +FS++G FL++ TFL + F LLR + ++ ++ F W+
Sbjct: 133 NGYFSIIFSTKGPMFFLMVASGTFLGIISIFFYLRGLLRTSGFHRQGYLIMIIASLFPWV 192
Query: 421 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLY 323
++LN + +F+ +++ +S+ +LY
Sbjct: 193 -----TVYLNAMNKSFLGIDYFPVVSVLSGILY 220
>UniRef50_Q4DE93 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 745
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 361 WYRCLSIFLAVLYFRSNFLRTLCLCTHSSF-CGIRALQY-LFSY 236
W+ C ++F+ + + N +C C HS GIR LQ+ LFS+
Sbjct: 33 WFSCRTLFIFLFFKYINIYIYICFCMHSRVGAGIRDLQFSLFSF 76
>UniRef50_Q0TVL0 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 882
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 360 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPR 539
H L + + + R E R++ ++A ++ Q++AR N + +R V+PPR
Sbjct: 727 HDLALALQLQEEEEDRQRREAAQRQRDDQASVSAIAAQSQARPNNRRTSRGENPPVIPPR 786
Query: 540 RRNCC--RPSLEKTKP 581
R N RP+ E P
Sbjct: 787 RNNITTHRPAGEPAPP 802
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 33.9 bits (74), Expect = 3.4
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 147 RHQETCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EKRYCNARMPQKE 278
RH TC+ P P CP H+G +GS S+WLW EK R QK+
Sbjct: 2 RHDTTCTPPFRPSICP-SHKGIASRGSGSMWLWGEKWRLLRRREQKK 47
>UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed;
n=6; Oryza sativa|Rep: Spc97/Spc98 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1139
Score = 33.5 bits (73), Expect = 4.5
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 16 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 186
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 187 VRKNTEARRKGRHCGFG 237
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 170 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 51
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q6X9Y8 Cluster: Ribosomal protein L19; n=1; Equus
caballus|Rep: Ribosomal protein L19 - Equus caballus
(Horse)
Length = 81
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 370 T*RRRVMCSRTSVCSWSTSTGXXXXXXXXXXXXXXXXPAAIK*RRH 507
T +RR MCS+T SW+TST PA ++ R+H
Sbjct: 1 TRKRRAMCSKTRGFSWNTSTSRRQTRLARSFWRTRLRPAGLRPRKH 46
>UniRef50_A7RGT3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 456
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = -3
Query: 544 LLLGGNTFLAALRASFTLLRRASAWSLSIFVLAFSAFFLWMYSMSTRLFLNTLP-FAFM* 368
+L GG LA + A L+ W L + ++ F W S+ T FL T+P +
Sbjct: 328 ILTGGGPSLAGILAVH-LVHHLEIWGLRPKLSKYT--FCWTLSVLTLAFLGTIPHLSNHA 384
Query: 367 SEWYRCLSIFLAVLYFRSNFLRTLCL 290
+ W + LA++Y +++ +CL
Sbjct: 385 NVWGFVVGFLLAMIYIPFQWVKRICL 410
>UniRef50_Q5XJ41 Cluster: Zgc:103708; n=1; Danio rerio|Rep:
Zgc:103708 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 172
Score = 32.7 bits (71), Expect = 7.9
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -1
Query: 309 FLEPFVFVPIVPSVAYAHCSTSSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDH 130
FL FVF SV A + S +T T+ + +TC D V C + + +D+
Sbjct: 7 FLLSFVFFVFTFSVVVAQTAKSPVTNCTIKSNTTC----EDCLKIVSCLWCISSQKCIDY 62
Query: 129 -LTDVLSGVGVCDLIDFIW 76
+ VL VC L D W
Sbjct: 63 PVNSVLPSHSVCPLSDARW 81
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 491 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 372
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1
Query: 198 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 79
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,031,588
Number of Sequences: 1657284
Number of extensions: 12702314
Number of successful extensions: 40690
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 38958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40607
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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