Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30109.Seq
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 150 5e-36
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 150 5e-36
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 150 5e-36
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 150 5e-36
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 150 5e-36
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 150 5e-36
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 150 5e-36
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 150 5e-36
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 150 5e-36
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 119 1e-26
U17032-1|AAA95963.1| 1499|Homo sapiens p190-B protein. 32 2.1
BC050059-1|AAH50059.1| 1502|Homo sapiens ARHGAP5 protein protein. 32 2.1
BC032723-1|AAH32723.1| 1189|Homo sapiens ARHGAP5 protein protein. 32 2.1
BC110624-1|AAI10625.1| 664|Homo sapiens zinc finger protein 800... 31 2.7
BC110623-1|AAI10624.1| 664|Homo sapiens zinc finger protein 800... 31 2.7
AF218032-1|AAG17274.1| 337|Homo sapiens unknown protein. 31 2.7
BC092481-1|AAH92481.1| 730|Homo sapiens PPP1R12A protein protein. 30 8.3
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGTA 94
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 81 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 140
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 141 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 190
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 150 bits (363), Expect = 5e-36
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +1
Query: 1 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 180
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 181 ARVRKNTEARRKGRHCGFGKRRGTA 255
AR RKNT ARRKGRH G GKR+GTA
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTA 85
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 181
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 119 bits (286), Expect = 1e-26
Identities = 54/66 (81%), Positives = 58/66 (87%)
Frame = +1
Query: 58 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 237
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 238 KRRGTA 255
KR+GTA
Sbjct: 61 KRKGTA 66
Score = 116 bits (280), Expect = 6e-26
Identities = 56/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 213 KGSSLWLW*EKRYCNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 392
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 53 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 112
Query: 393 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRR 542
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEAR L ++
Sbjct: 113 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKK 162
>U17032-1|AAA95963.1| 1499|Homo sapiens p190-B protein.
Length = 1499
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +3
Query: 357 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPP 536
YH+ + K N KN EYI+ + KAR + ++ +++ R N L P
Sbjct: 286 YHATW-KTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTL-P 343
Query: 537 RRRNCCRPSLEK 572
R N P+LE+
Sbjct: 344 RAFNTLLPNLEE 355
>BC050059-1|AAH50059.1| 1502|Homo sapiens ARHGAP5 protein protein.
Length = 1502
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +3
Query: 357 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPP 536
YH+ + K N KN EYI+ + KAR + ++ +++ R N L P
Sbjct: 286 YHATW-KTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTL-P 343
Query: 537 RRRNCCRPSLEK 572
R N P+LE+
Sbjct: 344 RAFNTLLPNLEE 355
>BC032723-1|AAH32723.1| 1189|Homo sapiens ARHGAP5 protein protein.
Length = 1189
Score = 31.9 bits (69), Expect = 2.1
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = +3
Query: 357 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPP 536
YH+ + K N KN EYI+ + KAR + ++ +++ R N L P
Sbjct: 286 YHATW-KTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTL-P 343
Query: 537 RRRNCCRPSLEK 572
R N P+LE+
Sbjct: 344 RAFNTLLPNLEE 355
>BC110624-1|AAI10625.1| 664|Homo sapiens zinc finger protein 800
protein.
Length = 664
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 426 HRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRRRNC 551
H +K K + + L E R+N + ++ ++NVL P R+C
Sbjct: 248 HIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSC 289
>BC110623-1|AAI10624.1| 664|Homo sapiens zinc finger protein 800
protein.
Length = 664
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 426 HRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRRRNC 551
H +K K + + L E R+N + ++ ++NVL P R+C
Sbjct: 248 HIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSC 289
>AF218032-1|AAG17274.1| 337|Homo sapiens unknown protein.
Length = 337
Score = 31.5 bits (68), Expect = 2.7
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 426 HRKKAEKARTKMLSDQAEARRNKVKEARSAARNVLPPRRRNC 551
H +K K + + L E R+N + ++ ++NVL P R+C
Sbjct: 248 HIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSC 289
>BC092481-1|AAH92481.1| 730|Homo sapiens PPP1R12A protein protein.
Length = 730
Score = 29.9 bits (64), Expect = 8.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 294 VFVPIVPSVAYAHCSTSSLTKATVTTLST 208
V +P+ P+V A ST++LT TV T+S+
Sbjct: 630 VTIPVAPTVVNAAASTTTLTTTTVGTVSS 658
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,350,337
Number of Sequences: 237096
Number of extensions: 2080254
Number of successful extensions: 4730
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4711
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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