Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30102.Seq
(594 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 136 5e-31
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 129 4e-29
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 116 6e-25
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 114 2e-24
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 113 4e-24
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 112 7e-24
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 55 2e-14
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 77 2e-13
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 72 9e-12
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 70 4e-11
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 66 8e-10
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 62 1e-08
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 60 3e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 52 1e-05
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 50 3e-05
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 50 5e-05
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 42 0.008
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 42 0.014
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 37 0.31
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 34 2.9
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 34 2.9
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 33 6.7
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 32 8.8
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.8
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 32 8.8
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 32 8.8
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 32 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 136 bits (328), Expect = 5e-31
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 3e-14
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 129 bits (312), Expect = 4e-29
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV FLTVMM HGY GEFEI+DDHR GK
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDGK 183
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 184 IVVNLTGRL 192
Score = 68.9 bits (161), Expect = 8e-11
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVIS RFDV + D+++W NLLP RQFG++VL T GI+ HEEARR
Sbjct: 194 KCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARR 241
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 116 bits (278), Expect = 6e-25
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = -3
Query: 442 SDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGKIVVNLTG 263
SDALKSI+NAEKRGKRQVLIR CSKVIV+FL+VMM HGYIGEFEI+DDH AGKIVVNLTG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTG 233
Query: 262 RL 257
RL
Sbjct: 234 RL 235
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVI+ RFDV D+E+W NL PS QFG++VL TS GIM HEEAR+
Sbjct: 237 KCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQ 284
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 114 bits (274), Expect = 2e-24
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVR++VL+D LKS++NAEKRGKRQV+IRP SKVI+KFL VM HGYIGEFE VDDHR+GK
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60
Query: 283 IVVNLTGRL 257
IVV L GRL
Sbjct: 61 IVVELNGRL 69
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + +IE WT LLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARR 118
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 113 bits (271), Expect = 4e-24
Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 4/83 (4%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVR NVL+DALK I+NA+KRGKRQVL+RPCS+VI++FLTV M HGYIGEFEI DDHRAGK
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAGK 59
Query: 283 IVVNLTGRLK--SVVS--FHLVL 227
+VV LT RL V+S FH+ L
Sbjct: 60 MVVYLTDRLNKCGVISPRFHVQL 82
Score = 68.9 bits (161), Expect = 8e-11
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRF V + D+E+W NLLPS QFG+++L TS GI EEARR
Sbjct: 70 KCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARR 117
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 112 bits (269), Expect = 7e-24
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = -3
Query: 469 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRA 290
+ MV MNVL DALKS ++AEK GKRQ IR CSK IV+FLTVMM HGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 289 GKIVVNLTGRL 257
GK+VVNLTGRL
Sbjct: 157 GKMVVNLTGRL 167
Score = 70.5 bits (165), Expect = 3e-11
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLP+RQFG++VL T GIM EE R+
Sbjct: 169 KCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQ 216
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 54.8 bits (126), Expect(2) = 2e-14
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = -3
Query: 469 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXH 332
++ V + + +S++NAEKRGKRQVL+RP SKV++KFL VM H
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 46.4 bits (105), Expect(2) = 2e-14
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -3
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRL 257
GYI EFE +DDHRAGKIVV L GR+
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRI 131
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 77.4 bits (182), Expect = 2e-13
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
M +N L++AL +++N E R +Q LI P SK+I+ L VM GYIGEFE +DD RAGK
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGK 60
Query: 283 IVVNLTGRL 257
I+V L GR+
Sbjct: 61 IIVQLLGRI 69
Score = 38.3 bits (85), Expect = 0.13
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLXTSGGIMXHEEARR 114
KCG ISPR+ + N + R + LPS++ G +++ T G+M H + R
Sbjct: 71 KCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIR 121
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 72.1 bits (169), Expect = 9e-12
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM +GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 283 IVVNLTGRL 257
V L GR+
Sbjct: 61 YRVQLLGRI 69
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEA 120
K G I PRF V +++ E+W LP+ +FG L++ TS G+M H+EA
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEA 116
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = -3
Query: 448 VLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGKIVVNL 269
+L+DAL++I NAE+RGK V ++P S V+ FL +M GYI F++ D HR G+I V+L
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDL 64
Query: 268 TGRL 257
GR+
Sbjct: 65 QGRV 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = -2
Query: 251 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEA 120
C ++ R DV +IE++T LP+RQ+GY+V+ T GI+ HEEA
Sbjct: 71 CKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEA 115
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 65.7 bits (153), Expect = 8e-10
Identities = 33/69 (47%), Positives = 44/69 (63%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGI 60
Query: 283 IVVNLTGRL 257
V L GR+
Sbjct: 61 YSVTLVGRI 69
Score = 51.2 bits (117), Expect = 2e-05
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEAR 117
KCG I PR+ V ERW LP++ FG L+L TS G+M EAR
Sbjct: 71 KCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEAR 117
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = -3
Query: 454 MNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGKIVV 275
++ LS+A+ +I NAE G+++ I+P SK+I L VM +GYI FE V++HR GK +V
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGGKFIV 62
Query: 274 NLTGRL 257
L+G +
Sbjct: 63 ELSGNI 68
Score = 42.7 bits (96), Expect = 0.006
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -2
Query: 251 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEARR 114
CG I PRF + + E + LP+R FG L++ T+ G+M ++AR+
Sbjct: 71 CGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARK 117
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = -3
Query: 445 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGKIVVNLT 266
L++ K+I+NA + GKRQ+L+R ++ + FL M+ HGYI F + D R+GK +++L
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSGKSIIDLN 64
Query: 265 GRL 257
GRL
Sbjct: 65 GRL 67
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEE 123
+CG ISP + V + IE + T LLP+RQFG+++ TS GI+ H+E
Sbjct: 69 RCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKE 113
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 51.6 bits (118), Expect = 1e-05
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
M N+L++ +++N E R + + P SK+ V+ L + GYIGEFE V+D R GK
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGGK 60
Query: 283 IVVNLTGRL 257
V+L ++
Sbjct: 61 FSVHLLAKI 69
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEA 120
KCG ISPRF V + W LPS G LV+ T+ G+M H EA
Sbjct: 71 KCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEA 116
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 50.4 bits (115), Expect = 3e-05
Identities = 26/71 (36%), Positives = 36/71 (50%)
Frame = -3
Query: 469 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRA 290
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 289 GKIVVNLTGRL 257
GK V L G +
Sbjct: 76 GKFEVELKGAI 86
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEAR 117
+CG + PR+ ++ E+W LP+R +G L++ TS G+M H EAR
Sbjct: 88 ECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAR 134
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -2
Query: 251 CGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
CGVI PR V ++IER+ + LP++ FG ++L T+ GIM H EAR+
Sbjct: 71 CGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARK 117
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -3
Query: 451 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGKIV 278
++++D L + N ++G+ + P S +I+K + +M GYI + +VD R GKI+
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR-GKII 60
Score = 37.1 bits (82), Expect = 0.31
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLXTSGGIMXHEEAR 117
+ I PRF V +++E++ LP+ FG L+L TS G++ + EA+
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAK 116
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 41.5 bits (93), Expect = 0.014
Identities = 17/28 (60%), Positives = 23/28 (82%)
Frame = -3
Query: 325 IGEFEIVDDHRAGKIVVNLTGRLKSVVS 242
IG+FE++DDHRAGKIV NL+ ++ V S
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQVCS 36
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 37.1 bits (82), Expect = 0.31
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 553 HWPSFYNVVTGKTL 594
HWPSFYNVVTGKTL
Sbjct: 5 HWPSFYNVVTGKTL 18
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 33.9 bits (74), Expect = 2.9
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 472 FSSRFVANRIXRGARYPIRPIVSRIT 549
F+ + R GARYPIRPIVSRIT
Sbjct: 250 FNQAYRYRRPRGGARYPIRPIVSRIT 275
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 33.9 bits (74), Expect = 2.9
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -3
Query: 445 LSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEF 314
++D L + N + G +V+ PCSKV++ L +++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -3
Query: 451 NVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEI 308
+ +SD L I NA K+ VLI P +K+ +K ++ GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 32.3 bits (70), Expect = 8.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 555 LAVVLQRRDWENP 593
LAVVLQRRDWENP
Sbjct: 179 LAVVLQRRDWENP 191
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 32.3 bits (70), Expect = 8.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 555 LAVVLQRRDWENP 593
LAVVLQRRDWENP
Sbjct: 68 LAVVLQRRDWENP 80
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 32.3 bits (70), Expect = 8.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 555 LAVVLQRRDWENP 593
LAVVLQRRDWENP
Sbjct: 22 LAVVLQRRDWENP 34
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 32.3 bits (70), Expect = 8.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 555 LAVVLQRRDWENP 593
LAVVLQRRDWENP
Sbjct: 26 LAVVLQRRDWENP 38
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 32.3 bits (70), Expect = 8.8
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 555 LAVVLQRRDWENP 593
LAVVLQRRDWENP
Sbjct: 8 LAVVLQRRDWENP 20
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,800,768
Number of Sequences: 1657284
Number of extensions: 8118100
Number of successful extensions: 14736
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 14485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14721
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -