Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30102.Seq
(594 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 136 7e-32
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 136 7e-32
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 136 7e-32
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 136 7e-32
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 136 7e-32
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 136 7e-32
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 136 7e-32
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 134 2e-31
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 101 1e-21
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 42 0.001
X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein. 30 7.1
U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein. 30 7.1
DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette, s... 30 7.1
AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein p... 30 7.1
AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane ... 30 7.1
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 77.4 bits (182), Expect = 4e-14
Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPR DV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 136 bits (328), Expect = 7e-32
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 134 bits (325), Expect = 2e-31
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 61 IVVNLTGRL 69
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 101 bits (243), Expect = 1e-21
Identities = 52/69 (75%), Positives = 57/69 (82%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
MVRMNVL+DALKSI+NAEKRGKR+ L+ LTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59
Query: 283 IVVNLTGRL 257
IVVNLTGRL
Sbjct: 60 IVVNLTGRL 68
Score = 80.6 bits (190), Expect = 4e-15
Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
Frame = -2
Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
KCGVISPRFDV + D+E+W NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 70 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 117
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 42.3 bits (95), Expect = 0.001
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3
Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 353
MV MNVL+ ALKSI+N + RGK QVL R C ++ F
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37
>X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.
Length = 1704
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
GY +F+ + DH G+ ++ + RL+ + H+ +T+ GL+ PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
>U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.
Length = 1704
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
GY +F+ + DH G+ ++ + RL+ + H+ +T+ GL+ PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
>DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), member 3 protein.
Length = 1704
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
GY +F+ + DH G+ ++ + RL+ + H+ +T+ GL+ PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
>AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein
protein.
Length = 1708
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
GY +F+ + DH G+ ++ + RL+ + H+ +T+ GL+ PH
Sbjct: 1463 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1511
>AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane
specific ATP-binding cassette protein protein.
Length = 1704
Score = 29.9 bits (64), Expect = 7.1
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 331 GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
GY +F+ + DH G+ ++ + RL+ + H+ +T+ GL+ PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,040,364
Number of Sequences: 237096
Number of extensions: 1208923
Number of successful extensions: 1649
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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