Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30099.Seq
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 207 7e-54
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 207 7e-54
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 146 2e-35
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 146 2e-35
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 70 2e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 70 2e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 2e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 40 0.001
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 35 0.052
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.068
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.091
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.28
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.28
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.84
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.84
AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical ... 31 0.84
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.5
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 1.5
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.6
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.6
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 28 7.9
S75262-1|AAC60520.1| 332|Caenorhabditis elegans p34cdc2 kinase ... 28 7.9
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 207 bits (505), Expect = 7e-54
Identities = 101/141 (71%), Positives = 111/141 (78%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 436
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHAL
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHAL 138
Query: 437 LAFTLGVKQLIVGVNKMDSTEPPYVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHG 616
LA TLGVKQLIV NKMDSTEPP+ + + KKIGYNP AV FVPISG++G
Sbjct: 139 LAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNG 198
Query: 617 DNMLELQPKCLGSRDGQVERK 679
DNMLE+ + VERK
Sbjct: 199 DNMLEVSSNMPWFKGWAVERK 219
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 204
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 205 DKLKAERE 228
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 207 bits (505), Expect = 7e-54
Identities = 101/141 (71%), Positives = 111/141 (78%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 436
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHAL
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHAL 138
Query: 437 LAFTLGVKQLIVGVNKMDSTEPPYVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHG 616
LA TLGVKQLIV NKMDSTEPP+ + + KKIGYNP AV FVPISG++G
Sbjct: 139 LAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNG 198
Query: 617 DNMLELQPKCLGSRDGQVERK 679
DNMLE+ + VERK
Sbjct: 199 DNMLEVSSNMPWFKGWAVERK 219
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 204
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 205 DKLKAERE 228
DKLKAERE
Sbjct: 61 DKLKAERE 68
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 204
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 205 DKLKAERE 228
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 141 bits (341), Expect = 5e-34
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 436
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHAL
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHAL 138
Query: 437 LAFTLGVKQLI 469
LA TLGVKQL+
Sbjct: 139 LAQTLGVKQLV 149
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 146 bits (353), Expect = 2e-35
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 204
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 205 DKLKAERE 228
DKLKAERE
Sbjct: 61 DKLKAERE 68
Score = 83.0 bits (196), Expect(2) = 6e-32
Identities = 36/39 (92%), Positives = 39/39 (100%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 373
KFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 79 KFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 72.5 bits (170), Expect(2) = 6e-32
Identities = 36/72 (50%), Positives = 44/72 (61%)
Frame = +2
Query: 464 LIVGVNKMDSTEPPYVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHGDNMLELQPK 643
L+V NKMDSTEPP+ + + KKIGYNP AV FVPISG++GDNMLE+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 644 CLGSRDGQVERK 679
+ VERK
Sbjct: 174 MPWFKGWAVERK 185
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 204
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 205 DKLKAER 225
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 120 bits (288), Expect = 1e-27
Identities = 62/124 (50%), Positives = 84/124 (67%)
Frame = +2
Query: 260 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 439
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 243 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALL 302
Query: 440 AFTLGVKQLIVGVNKMDSTEPPYVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHGD 619
+LGV QLIV VNK+D+ + D K+ T ++ G++ FVP+SG+ G+
Sbjct: 303 LRSLGVTQLIVAVNKLDTVDWSQDRFDEIKNNLSVFLT-RQAGFSKP--KFVPVSGFTGE 359
Query: 620 NMLE 631
N+++
Sbjct: 360 NLIK 363
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +1
Query: 34 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 213
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 214 KAERE 228
+ ERE
Sbjct: 227 EEERE 231
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 120 bits (288), Expect = 1e-27
Identities = 62/124 (50%), Positives = 84/124 (67%)
Frame = +2
Query: 260 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 439
FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL
Sbjct: 261 FETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALL 320
Query: 440 AFTLGVKQLIVGVNKMDSTEPPYVSPDLRKSRRKYPHTFKKIGYNPAAVAFVPISGWHGD 619
+LGV QLIV VNK+D+ + D K+ T ++ G++ FVP+SG+ G+
Sbjct: 321 LRSLGVTQLIVAVNKLDTVDWSQDRFDEIKNNLSVFLT-RQAGFSKP--KFVPVSGFTGE 377
Query: 620 NMLE 631
N+++
Sbjct: 378 NLIK 381
Score = 83.0 bits (196), Expect = 2e-16
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = +1
Query: 34 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 213
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 214 KAERE 228
+ ERE
Sbjct: 245 EEERE 249
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 118 bits (284), Expect = 4e-27
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Frame = +2
Query: 260 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 439
FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L
Sbjct: 182 FETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSML 241
Query: 440 AFTLGVKQLIVGVNKMDSTEPPYVSPDLRKSRRKYPHTFKKIGYNPAA-VAFVPISGWHG 616
T GVK L++ VNKMD + ++ K +K+G+NP + +VP SG G
Sbjct: 242 VKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
Score = 79.0 bits (186), Expect = 3e-15
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +1
Query: 28 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 207
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 208 KLKAERE 228
ERE
Sbjct: 164 TNDEERE 170
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 293 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 472
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 473 GVNKMDSTE 499
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 37 KTHINIVVIGHVDSGKSTTT 96
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 293 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 472
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 473 GVNKMDSTE 499
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 37 KTHINIVVIGHVDSGKSTTT 96
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 436
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 437 LAFTLGV--KQLIVGVNKMD 490
LA +GV ++V +NK+D
Sbjct: 159 LARQVGVPLDNIVVFMNKVD 178
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 31 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 201
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 202 LDKLKAER 225
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 436
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 437 LAFTLGV--KQLIVGVNKMD 490
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 31 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 201
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 202 LDKLKAER 225
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +2
Query: 257 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 436
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 437 LAFTLGV--KQLIVGVNKMD 490
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 31 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 201
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 202 LDKLKAER 225
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +2
Query: 281 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 460
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 461 QLIVGVNKMDSTEPPYVSPDLRKSRR 538
++I+ +NK D E +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 46 INIVVIGHVDSGKSTTT 96
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 40.3 bits (90), Expect = 0.001
Identities = 42/129 (32%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Frame = +2
Query: 281 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 460
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 461 QLIVGVNKMDSTEPPYVSPDLRKSRRKYPH--TFKKIGYNPAAVAFVPISGWHGDNMLEL 634
QL+V VNK+D P P +R R H +++G V V +S N+ L
Sbjct: 258 QLVVAVNKIDK---PNADP-MRAMRSLLEHDVVVEQLG---GDVQCVEVSALQSRNLPSL 310
Query: 635 QPKCLGSRD 661
Q L D
Sbjct: 311 QDALLLQAD 319
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 35.1 bits (77), Expect = 0.052
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +2
Query: 248 CSRKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 427
C +F T +V+ +D PGH + M+ G + D A L+VA QT E
Sbjct: 119 CGGEF-TCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSE 171
Query: 428 HALLAFTLGVKQLIVGVNKMD 490
H + + L++ NK+D
Sbjct: 172 HLAAVEIMQLNHLMILQNKVD 192
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.068
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +2
Query: 275 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 454
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 455 VKQLIVGVNKMD 490
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 49 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 165
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 49 NIVVIGHVDSGKSTTTGHLIYKCGGI 126
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 483 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 355
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 49 NIVVIGHVDSGKSTTTGHLIYKCGGID 129
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/70 (32%), Positives = 30/70 (42%)
Frame = +2
Query: 281 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 460
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 461 QLIVGVNKMD 490
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 120
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 254 RKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 385
+K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 103 KKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 25 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 120
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 254 RKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 385
+K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 103 KKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 1 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 111
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 1 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 111
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AC024808-3|AAK29925.1| 183|Caenorhabditis elegans Hypothetical
protein Y53G8AM.6 protein.
Length = 183
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = -1
Query: 601 NGHESDSSWVVANLLECMRILPS*FPQIWAHVWWFSGIHF--VYSYDELFDTEGESEQ 434
NGH SD + ++ C+RIL S ++ H +++ +F + S+D+L E + E+
Sbjct: 40 NGHFSDLASFQVSIEVCVRILLSLVHNVFVHASYYNVFNFENLVSFDKLLPAEKDLEK 97
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 266 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 385
+ Y + IID PGH +F M AD V++V A G
Sbjct: 198 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 266 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 385
+ Y + IID PGH +F M AD V++V A G
Sbjct: 73 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 287 IIDAPGHRDFIKNMITGTSQADCAVLIV 370
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 127 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 228
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 127 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 228
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 46 INIVVIGHVDSGKSTTT 96
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 281 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 376
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +1
Query: 142 EKFEKEAQEMGKGSFKYAWVLDKLKAEREXVSQSILLSE 258
E+ +K +EM K +Y L++L+ E + + Q +LLS+
Sbjct: 211 ERIQKLQEEMLKTQSQYQRELERLEKENKVLKQRLLLSD 249
>S75262-1|AAC60520.1| 332|Caenorhabditis elegans p34cdc2 kinase
protein.
Length = 332
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 292 NDGNIVLASFELPRAISIVIPXHAQPLV 209
N+G I LA F L RAI I IP + +V
Sbjct: 156 NNGAIKLADFGLARAIGIPIPVYTHEVV 183
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,526,459
Number of Sequences: 27780
Number of extensions: 350360
Number of successful extensions: 1015
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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