Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30059.Seq
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.45 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.45 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.45 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.45 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   2.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   2.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   4.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   9.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 635 KKVSIPLGNHCIWSLPVGKVK 697
           KK+  P G   +W+LP GK K
Sbjct: 662 KKIPTPYGGRLVWTLP-GKTK 681


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 635 KKVSIPLGNHCIWSLPVGKVK 697
           KK+  P G   +W+LP GK K
Sbjct: 662 KKIPTPYGGRLVWTLP-GKTK 681


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 635 KKVSIPLGNHCIWSLPVGKVK 697
           KK+  P G   +W+LP GK K
Sbjct: 662 KKIPTPYGGRLVWTLP-GKTK 681


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 635 KKVSIPLGNHCIWSLPVGKVK 697
           KK+  P G   +W+LP GK K
Sbjct: 662 KKIPTPYGGRLVWTLP-GKTK 681


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 45  YYRYNLFFXCGMLGNLINMYAAKFLIH 125
           Y+  + FF     GN+I  Y  +F IH
Sbjct: 240 YFFISTFFYFFTTGNIIATYDKQFYIH 266


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 45  YYRYNLFFXCGMLGNLINMYAAKFLIH 125
           Y+  + FF     GN+I  Y  +F IH
Sbjct: 236 YFFISTFFYFFTTGNIIATYDKQFYIH 262


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 543 HLFIYLTRSLECEIKAVGSGTCS 611
           HLF+ ++   +  ++   SGTCS
Sbjct: 598 HLFVMISNYADDRVEQDTSGTCS 620


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/33 (24%), Positives = 19/33 (57%)
 Frame = -3

Query: 577 HSKLLVRYINRCIAKQKFQRXISRGEMVSNLGI 479
           +S L ++ +NR   + ++     R E+ ++LG+
Sbjct: 128 YSSLQLQQLNRRFQRTQYLALPERAELAASLGL 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,948
Number of Sequences: 336
Number of extensions: 3574
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)