Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30059.Seq
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC040695-1|AAH40695.1| 358|Homo sapiens WBSCR16 protein protein. 60 8e-09
BC032712-1|AAH32712.1| 454|Homo sapiens WBSCR16 protein protein. 60 8e-09
BC019008-1|AAH19008.1| 464|Homo sapiens Williams-Beuren syndrom... 60 8e-09
BC007823-1|AAH07823.1| 464|Homo sapiens Williams-Beuren syndrom... 60 8e-09
AF410455-1|AAM62304.1| 464|Homo sapiens RCC1-like G exchanging ... 60 8e-09
AY284025-1|AAP32531.1| 312|Homo sapiens putative olfactory rece... 30 9.2
AY284005-1|AAP32511.1| 312|Homo sapiens putative olfactory rece... 30 9.2
>BC040695-1|AAH40695.1| 358|Homo sapiens WBSCR16 protein protein.
Length = 358
Score = 60.1 bits (139), Expect = 8e-09
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHFTTRNXP--LELLLSYAPIYIP 559
S KT++ KV+G G+N DSQ+G+H + ++ E +L +P+ +P
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
>BC032712-1|AAH32712.1| 454|Homo sapiens WBSCR16 protein protein.
Length = 454
Score = 60.1 bits (139), Expect = 8e-09
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHFTTRNXP--LELLLSYAPIYIP 559
S KT++ KV+G G+N DSQ+G+H + ++ E +L +P+ +P
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
>BC019008-1|AAH19008.1| 464|Homo sapiens Williams-Beuren syndrome
chromosome region 16 protein.
Length = 464
Score = 60.1 bits (139), Expect = 8e-09
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHFTTRNXP--LELLLSYAPIYIP 559
S KT++ KV+G G+N DSQ+G+H + ++ E +L +P+ +P
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
>BC007823-1|AAH07823.1| 464|Homo sapiens Williams-Beuren syndrome
chromosome region 16 protein.
Length = 464
Score = 60.1 bits (139), Expect = 8e-09
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHFTTRNXP--LELLLSYAPIYIP 559
S KT++ KV+G G+N DSQ+G+H + ++ E +L +P+ +P
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
>AF410455-1|AAM62304.1| 464|Homo sapiens RCC1-like G exchanging
factor-like protein protein.
Length = 464
Score = 60.1 bits (139), Expect = 8e-09
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Frame = +2
Query: 257 VWGFAETGALGIH---LPRXXXXXXXXXXXXXLVWH-PMRSSFAERFDITNIACGYGFTV 424
VWGF+ +GALG+ +P + P R ++ I++ ACGYGFT+
Sbjct: 63 VWGFSFSGALGVPSFVVPSSGPGPRAGARPRRRIQPVPYRLELDQK--ISSAACGYGFTL 120
Query: 425 ASIKTSEQHKVFGTGINTDSQIGYHFTTRNXP--LELLLSYAPIYIP 559
S KT++ KV+G G+N DSQ+G+H + ++ E +L +P+ +P
Sbjct: 121 LSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP 167
>AY284025-1|AAP32531.1| 312|Homo sapiens putative olfactory
receptor protein.
Length = 312
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 60 LFFXCGMLGNLINMYAAKFLIHRRSPV-FLLNRVSI 164
LF+ M+GNL+ ++ H SP+ FLL +SI
Sbjct: 33 LFYFASMMGNLVTVFTVTMDAHLHSPMYFLLANLSI 68
>AY284005-1|AAP32511.1| 312|Homo sapiens putative olfactory
receptor protein.
Length = 312
Score = 29.9 bits (64), Expect = 9.2
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 60 LFFXCGMLGNLINMYAAKFLIHRRSPV-FLLNRVSI 164
LF+ M+GNL+ ++ H SP+ FLL +SI
Sbjct: 33 LFYFASMMGNLVTVFTVTMDAHLHSPMYFLLANLSI 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,444,636
Number of Sequences: 237096
Number of extensions: 2101480
Number of successful extensions: 3438
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3438
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -