Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0768.Seq
(284 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 40 4e-04
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 36 0.005
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 36 0.005
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 36 0.005
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 33 0.027
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 33 0.036
10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539 28 1.0
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 28 1.0
01_05_0672 + 24177338-24177413,24178596-24179641 28 1.3
11_01_0472 + 3656471-3656780,3656902-3656996 26 4.1
02_05_0888 - 32517876-32518087,32518320-32518694,32519551-325196... 26 4.1
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 26 4.1
10_08_0986 + 22050631-22051224,22051493-22051703,22051791-220520... 26 5.4
10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257 26 5.4
09_04_0117 + 14813472-14814113,14814194-14814404,14814552-148148... 26 5.4
07_03_0742 + 21113682-21114567,21115413-21115552,21115637-211158... 26 5.4
02_02_0059 - 6432945-6433115,6433975-6434061,6434585-6434787,643... 26 5.4
08_02_0620 + 19387935-19388279 25 7.1
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948 25 7.1
04_04_1384 + 33152452-33153408 25 7.1
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 25 7.1
03_03_0076 - 14281757-14282201,14282227-14282579 25 7.1
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 25 7.1
12_02_1046 + 25662715-25662884,25663163-25663757 25 9.4
09_02_0342 + 7464679-7464691,7466689-7468136 25 9.4
06_03_1373 + 29667871-29668782,29668872-29669851,29670156-296703... 25 9.4
05_02_0060 + 6236624-6237040 25 9.4
04_04_0416 + 25042937-25043350,25044038-25044238,25044343-250445... 25 9.4
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 39.5 bits (88), Expect = 4e-04
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G + GL+PG HG H + GD + GCNS
Sbjct: 42 GRVTGLAPGLHGFHIHSFGDTTNGCNS 68
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 35.9 bits (79), Expect = 0.005
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 129 IDGLSPGRHGLHXYEXGDLSQGCNS 55
+ GL+PG HG H +E GD + GC S
Sbjct: 84 VTGLTPGLHGFHLHEFGDTTNGCIS 108
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 35.9 bits (79), Expect = 0.005
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G + GL PG HG H + GD + GC S
Sbjct: 32 GSVSGLKPGLHGFHVHALGDTTNGCMS 58
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 35.9 bits (79), Expect = 0.005
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G + GL PG HG H + GD + GC S
Sbjct: 150 GSVSGLKPGLHGFHIHALGDTTNGCMS 176
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 33.5 bits (73), Expect = 0.027
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -3
Query: 144 VADGXIDGLSPGRHGLHXYEXGDLSQGCNS 55
+ + GLSPG+HG E GDL++G S
Sbjct: 191 IVEATFSGLSPGKHGWSINEFGDLTRGAES 220
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 33.1 bits (72), Expect = 0.036
Identities = 19/56 (33%), Positives = 22/56 (39%)
Frame = +3
Query: 108 SRGLVRRXCRQPPGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPGSRLVLP 275
SR L+ PPG P P H P +C PRP S P+P LP
Sbjct: 380 SRRLLLLLLLPPPGPPPLAQAPPRHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLP 435
>10_08_0601 + 19103745-19105162,19105253-19105717,19106314-19106539
Length = 702
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -3
Query: 276 RGVPAVIQVLGKHNRPSTMVS-DQSXCNKIL 187
RGVPA+I V+GK P S D + C++ L
Sbjct: 298 RGVPAIIGVMGKQRLPYPSRSFDMAHCSRCL 328
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 28.3 bits (60), Expect = 1.0
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -3
Query: 219 VSDQSXCNKILGRGQXADRRPRARLVADGXIDGLSPGRHGLHXYEXGDLSQGCNSXRGXL 40
+ DQ K++ + D + + + GL P HG H + G + GC R L
Sbjct: 15 LQDQERAEKVMLKA--VDVLASSLITVKENVSGLKPVLHGFHVHALGGTTNGC--MRNGL 70
Query: 39 *CXS 28
C S
Sbjct: 71 WCAS 74
>01_05_0672 + 24177338-24177413,24178596-24179641
Length = 373
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 RRALGRLSAX*PRPRILLQXDWSETMVDGRLCFP 247
+RA+ +A R R++ Q + TM DG LC P
Sbjct: 319 KRAVLEFAAIANRTRVVFQSTFYHTMTDGSLCGP 352
>11_01_0472 + 3656471-3656780,3656902-3656996
Length = 134
Score = 26.2 bits (55), Expect = 4.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 133 AVSHQAGPRPSVCXLTTXQDLIAXRLVRDHGRRP 234
+ SH+ P PS L RL+ HGRRP
Sbjct: 22 STSHRIDPPPSPSSLRRLLTSPPHRLLSSHGRRP 55
>02_05_0888 -
32517876-32518087,32518320-32518694,32519551-32519638,
32520145-32520384,32521033-32521149,32521213-32521606,
32521752-32521998,32522086-32522315,32522768-32522823,
32522903-32523094,32523274-32523376,32523478-32523544,
32524312-32525154,32525547-32525670,32525965-32526213,
32526354-32526443,32526530-32526649,32526664-32526738,
32527001-32527147,32527255-32527365,32527446-32527667,
32527777-32527896,32527971-32528270,32528355-32528480,
32529246-32529360,32529556-32530019,32530119-32530253,
32530684-32530788,32530876-32531053,32531143-32531864
Length = 2188
Score = 26.2 bits (55), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 95 WSPCLPGLSPSMXPSATRRALGRLSAX*PRP 187
+SP LP L+PS P A R A R P P
Sbjct: 32 FSPYLPTLNPSAKPPAKRTAKQRKQQPPPPP 62
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = +2
Query: 125 SMXPSATRRALGRLSAX*PRPRILLQXDWSETMVDGRLCFPKTWITAGTPR 277
S+ SAT A P P I DWS+ G +P W + P+
Sbjct: 303 SVMTSATPPTPPAAPAFRPAPPIPSLNDWSQPPARGSTFYPSIWQSEADPK 353
>10_08_0986 +
22050631-22051224,22051493-22051703,22051791-22052082,
22052415-22052780,22052878-22052955,22053099-22053327
Length = 589
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 276 RGVPAVIQVLGKHNRPSTMVS-DQSXCNKIL 187
RGVPAVI VLG P S D + C++ L
Sbjct: 232 RGVPAVIGVLGTIKLPYPSGSFDMAHCSRCL 262
>10_07_0188 + 13921731-13921938,13922076-13922338,13922463-13923257
Length = 421
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 108 SRGLVRRXCRQPPGGPSAVCLXPDHXPGSY 197
S+G PP P VC P PGSY
Sbjct: 224 SQGYPYDVAAAPPTAPWPVCWAPPSAPGSY 253
>09_04_0117 +
14813472-14814113,14814194-14814404,14814552-14814846,
14815059-14815448,14815528-14815605,14815692-14815926
Length = 616
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 276 RGVPAVIQVLGKHNRP-STMVSDQSXCNKIL 187
RGVPAVI VLG P + D + C++ L
Sbjct: 248 RGVPAVIGVLGTIKLPYPSRAFDMAHCSRCL 278
>07_03_0742 +
21113682-21114567,21115413-21115552,21115637-21115847,
21115947-21116184,21116281-21116431,21116535-21116825
Length = 638
Score = 25.8 bits (54), Expect = 5.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 80 PXSYXWSPCLPGLSPSMXPSATRRALG 160
P Y W+ C P L+P+ S + +G
Sbjct: 200 PKVYSWAQCTPDLTPASCRSCLAQIIG 226
>02_02_0059 -
6432945-6433115,6433975-6434061,6434585-6434787,
6435281-6435392,6435473-6435517,6435622-6435726,
6435946-6435996,6436026-6436103,6437258-6437313,
6437784-6437853,6438288-6438392,6438525-6438637,
6439354-6439534,6439635-6440390
Length = 710
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 208 LVRDHGRRPIVFPQNLDHG 264
L+RDHGR P P + HG
Sbjct: 55 LIRDHGRPPFPPPPGMLHG 73
>08_02_0620 + 19387935-19388279
Length = 114
Score = 25.4 bits (53), Expect = 7.1
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +3
Query: 111 RGLVRRXCRQP-PGGPSAVCLXPDHXPGS 194
RG RR CR+P GG C H P S
Sbjct: 70 RGCERRWCRKPMSGGGGGGCWGGGHQPRS 98
>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
Length = 508
Score = 25.4 bits (53), Expect = 7.1
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 283 PLTGSTSRDPGFGETQSAVD-HGLGPIVLQ*DPGXWSG 173
PLTG R P F T++ VD H G I+ Q D G G
Sbjct: 202 PLTGELFRLPDFDGTENTVDVHHTG-ILTQRDGGGEDG 238
>04_04_1384 + 33152452-33153408
Length = 318
Score = 25.4 bits (53), Expect = 7.1
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Frame = +2
Query: 95 WSPCLPGLSPSMXPSATRRALGRLSAX*PRPRIL--LQXDWSETMVDGRLCFPKTWITAG 268
W+P PG PS+ +A G +A P ++ Q + + + LC +G
Sbjct: 223 WNPTSPGRMPSIFTTAVLARTGATAAKGPTDVLVHDFQFELEQVLSKEFLCDENRVAGSG 282
Query: 269 TP 274
TP
Sbjct: 283 TP 284
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 25.4 bits (53), Expect = 7.1
Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +3
Query: 213 PRPWSTADCVSPKP-GSRLVLPVN 281
P+PW A+ + P P G +V+P++
Sbjct: 541 PQPWEAAELIRPMPLGEIVVVPLH 564
>03_03_0076 - 14281757-14282201,14282227-14282579
Length = 265
Score = 25.4 bits (53), Expect = 7.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 201 CNKILGRGQXADRRPRARLVADGXIDGLSPGR 106
C GRG A RPRAR + + G+ G+
Sbjct: 11 CEDEEGRGTAAGLRPRARAWEEDLLGGVGTGQ 42
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 25.4 bits (53), Expect = 7.1
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 48 PXWNCSPDLNPRXHIXGARASRGLVRRXCRQPPGGPSAVCLXPDHXPGS 194
P N P NP + +RR R+P GP+A P P S
Sbjct: 50 PRKNPKPPPNPSPSSSPLAQTLASIRRSIRRPEDGPAAPRPDPPAAPAS 98
>12_02_1046 + 25662715-25662884,25663163-25663757
Length = 254
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/49 (24%), Positives = 19/49 (38%)
Frame = -3
Query: 192 ILGRGQXADRRPRARLVADGXIDGLSPGRHGLHXYEXGDLSQGCNSXRG 46
++ R DRRP G + P RHG + + G ++ G
Sbjct: 159 VVRRRDQFDRRPLHHAAPAGLLSRRRPSRHGARDAQPAEADSGGDAVAG 207
>09_02_0342 + 7464679-7464691,7466689-7468136
Length = 486
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 141 PPGGPSAVCLXPDH 182
PP P+AVC+ P+H
Sbjct: 43 PPQRPAAVCIGPNH 56
>06_03_1373 +
29667871-29668782,29668872-29669851,29670156-29670350,
29670460-29670676
Length = 767
Score = 25.0 bits (52), Expect = 9.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 226 RRPIVFPQNLDHGWYS 273
RRPI +P++ D WYS
Sbjct: 293 RRPIEWPKSRDRVWYS 308
>05_02_0060 + 6236624-6237040
Length = 138
Score = 25.0 bits (52), Expect = 9.4
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 99 ARASRGLVRRXCRQPPGG-PSAVCLXP 176
A ASRG RQPPG P+ CL P
Sbjct: 101 APASRGEGGEAARQPPGPLPTRGCLAP 127
>04_04_0416 +
25042937-25043350,25044038-25044238,25044343-25044525,
25044975-25045084,25045317-25045376,25045620-25045911,
25046780-25046967,25047275-25048149,25048846-25049805,
25050025-25050068,25050860-25050925,25051176-25051364
Length = 1193
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 210 GPRPWSTADCVSPKPGSRLVLPVN 281
GP S ++ VS PG RLV+P+N
Sbjct: 775 GPSGNSESNDVSLPPGRRLVVPLN 798
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,683,114
Number of Sequences: 37544
Number of extensions: 179845
Number of successful extensions: 429
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 291966432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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