Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0768.Seq
(284 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 48 4e-06
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 47 1e-05
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 47 1e-05
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 47 1e-05
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 47 1e-05
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 35 0.042
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 35 0.042
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 35 0.042
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 35 0.042
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 35 0.042
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 35 0.042
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 35 0.042
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 35 0.042
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 35 0.042
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 35 0.042
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 35 0.042
U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase prot... 30 1.6
J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein. 30 1.6
CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein. 30 1.6
BC034918-1|AAH34918.1| 167|Homo sapiens C9orf45 protein protein. 30 1.6
BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,... 30 1.6
AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,... 30 1.6
AL365338-2|CAH70297.1| 167|Homo sapiens chromosome 9 open readi... 30 1.6
AF251293-1|AAG44593.1| 167|Homo sapiens GL012 protein. 30 1.6
BC100967-1|AAI00968.1| 193|Homo sapiens chromosome 17 open read... 29 2.1
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 29 2.7
AY236486-1|AAP74806.1| 245|Homo sapiens proliferation-inducing ... 29 2.7
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 29 2.7
X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxid... 29 3.6
BC009448-1|AAH09448.2| 193|Homo sapiens chromosome 17 open read... 28 4.8
BC100965-1|AAI00966.1| 193|Homo sapiens chromosome 17 open read... 28 6.3
BC100964-1|AAI00965.2| 193|Homo sapiens chromosome 17 open read... 28 6.3
L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase prot... 27 8.3
BC069017-1|AAH69017.1| 364|Homo sapiens rhomboid domain contain... 27 8.3
BC033066-1|AAH33066.1| 539|Homo sapiens F-box and leucine-rich ... 27 8.3
BC006234-1|AAH06234.2| 233|Homo sapiens RHBDD2 protein protein. 27 8.3
AL031847-3|CAI19439.1| 180|Homo sapiens hairy and enhancer of s... 27 8.3
AK223088-1|BAD96808.1| 533|Homo sapiens F-box and leucine-rich ... 27 8.3
AK123170-1|BAC85547.1| 330|Homo sapiens protein ( Homo sapiens ... 27 8.3
AK026590-1|BAB15503.1| 223|Homo sapiens protein ( Homo sapiens ... 27 8.3
AK026541-1|BAB15499.1| 533|Homo sapiens protein ( Homo sapiens ... 27 8.3
AC005067-2|AAD45960.1| 364|Homo sapiens WUGSC:H_RG122E10.2b pro... 27 8.3
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -3
Query: 150 RLVADGXIDGLSPGRHGLHXYEXGDLSQGCNS 55
R + DG IDGL PG HGLH ++ GDL+ CNS
Sbjct: 112 RCLIDGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 150 RLVADGXIDGLSPGRHGLHXYEXGDLSQGCNS 55
R + +G IDGL PG HGLH ++ GDL+ CNS
Sbjct: 112 RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 150 RLVADGXIDGLSPGRHGLHXYEXGDLSQGCNS 55
R + +G IDGL PG HGLH ++ GDL+ CNS
Sbjct: 112 RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 150 RLVADGXIDGLSPGRHGLHXYEXGDLSQGCNS 55
R + +G IDGL PG HGLH ++ GDL+ CNS
Sbjct: 112 RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -3
Query: 150 RLVADGXIDGLSPGRHGLHXYEXGDLSQGCNS 55
R + +G IDGL PG HGLH ++ GDL+ CNS
Sbjct: 112 RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNS 143
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 35.1 bits (77), Expect = 0.042
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGDLSQGCNS 55
G I GL+ G HG H +E GD + GC S
Sbjct: 34 GSIKGLTEGLHGFHVHEFGDNTAGCTS 60
>U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase
protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 159 PRARLVADGXIDGL----SPGRHGLHXYEXGDLSQGCNS 55
PRA+L A ++G + +H ++ GDLSQGC S
Sbjct: 89 PRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 159 PRARLVADGXIDGL----SPGRHGLHXYEXGDLSQGCNS 55
PRA+L A ++G + +H ++ GDLSQGC S
Sbjct: 89 PRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 159 PRARLVADGXIDGL----SPGRHGLHXYEXGDLSQGCNS 55
PRA+L A ++G + +H ++ GDLSQGC S
Sbjct: 89 PRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>BC034918-1|AAH34918.1| 167|Homo sapiens C9orf45 protein protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 57 NCSPDLN-PRX-HIXGARASRGLVRRXCRQPPGG 152
NC P PR H+ G + S G +R C QPPGG
Sbjct: 71 NCRPPTRGPRSLHLPGTKGSSGSLRS-CLQPPGG 103
>BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 159 PRARLVADGXIDGL----SPGRHGLHXYEXGDLSQGCNS 55
PRA+L A ++G + +H ++ GDLSQGC S
Sbjct: 89 PRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = -3
Query: 159 PRARLVADGXIDGL----SPGRHGLHXYEXGDLSQGCNS 55
PRA+L A ++G + +H ++ GDLSQGC S
Sbjct: 89 PRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCES 127
>AL365338-2|CAH70297.1| 167|Homo sapiens chromosome 9 open reading
frame 45 protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 57 NCSPDLN-PRX-HIXGARASRGLVRRXCRQPPGG 152
NC P PR H+ G + S G +R C QPPGG
Sbjct: 71 NCRPPTRGPRSLHLPGTKGSSGSLRS-CLQPPGG 103
>AF251293-1|AAG44593.1| 167|Homo sapiens GL012 protein.
Length = 167
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 57 NCSPDLN-PRX-HIXGARASRGLVRRXCRQPPGG 152
NC P PR H+ G + S G +R C QPPGG
Sbjct: 71 NCRPPTRGPRSLHLPGTKGSSGSLRS-CLQPPGG 103
>BC100967-1|AAI00968.1| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 132 CRQPPGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPG 257
C QPPG PG C +GPRP T +PG
Sbjct: 80 CAQPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +3
Query: 114 GLVRRXCRQPPGGPSAVCLXPDHXPGSYCXTI-----GPRPWSTADC 239
G + CR PGG S VC G C + G +P STA+C
Sbjct: 2026 GTCSQWCRCGPGGGSLVCTPASCGLGEVCGLLPSGQHGCQPVSTAEC 2072
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +3
Query: 114 GLVRRXCRQPPGGPSAVCLXPDHXPGSYCXTI-----GPRPWSTADC 239
G + CR PGG S VC G C + G +P STA+C
Sbjct: 3227 GTCSQWCRCGPGGGSLVCTPASCGLGEVCGLLPSGQHGCQPVSTAEC 3273
>AY236486-1|AAP74806.1| 245|Homo sapiens proliferation-inducing
gene 5 protein.
Length = 245
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +3
Query: 114 GLVRRXCRQPPGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPGSR 263
GL R P GPS C D P + P CV P P R
Sbjct: 177 GLPARHAHLPVQGPSGPCTVADADPAVPVRQLPTTPAGKQFCVHPHPAGR 226
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Frame = +3
Query: 114 GLVRRXCRQPPGGPSAVCLXPDHXPGSYCXTI-----GPRPWSTADC 239
G + CR PGG S VC G C + G +P STA+C
Sbjct: 2026 GTCSQWCRCGPGGGSLVCTPASCGLGEVCGLLPSGQHGCQPVSTAEC 2072
>X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 2. ).
Length = 32
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGD 76
G I GL+ G HG H +E GD
Sbjct: 10 GSIKGLTEGLHGFHVHEFGD 29
>BC009448-1|AAH09448.2| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 132 CRQPPGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPG 257
C +PPG PG C +GPRP T +PG
Sbjct: 80 CARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPRSAQSRPG 121
>BC100965-1|AAI00966.1| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 132 CRQPPGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPG 257
C +PPG PG C +GPRP T +PG
Sbjct: 80 CARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
>BC100964-1|AAI00965.2| 193|Homo sapiens chromosome 17 open reading
frame 65 protein.
Length = 193
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 132 CRQPPGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPG 257
C +PPG PG C +GPRP T +PG
Sbjct: 80 CARPPGHQLQPPGAGAPQPGVACSYLGPRPQRTPCSAQSRPG 121
>L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase
protein.
Length = 32
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 135 GXIDGLSPGRHGLHXYEXGD 76
G I GL+ G HG H E GD
Sbjct: 10 GSIKGLTEGLHGFHVQEFGD 29
>BC069017-1|AAH69017.1| 364|Homo sapiens rhomboid domain containing
2 protein.
Length = 364
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 80 PXSYXWSPCLPGLSPSMXPSATRRALGRLSAX*P 181
P SY C P LSPS S T+ A G+ A P
Sbjct: 251 PGSYPTQSCHPHLSPSHPVSQTQHASGQKLASWP 284
>BC033066-1|AAH33066.1| 539|Homo sapiens F-box and leucine-rich
repeat protein 6 protein.
Length = 539
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 102 RASRGLVRRXCRQPPGGPSA 161
RA R RR RQPP GPSA
Sbjct: 58 RAQRRASRRTPRQPPRGPSA 77
>BC006234-1|AAH06234.2| 233|Homo sapiens RHBDD2 protein protein.
Length = 233
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 80 PXSYXWSPCLPGLSPSMXPSATRRALGRLSAX*P 181
P SY C P LSPS S T+ A G+ A P
Sbjct: 120 PGSYPTQSCHPHLSPSHPVSQTQHASGQKLASWP 153
>AL031847-3|CAI19439.1| 180|Homo sapiens hairy and enhancer of
split 3 (Drosophila) protein.
Length = 180
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 144 PGGPSAVCLXPDHXPGSYCXTIGPRPWSTADCVSPKPGSRLVLP 275
P P + L P+ PGS P+P S+ SP G R+ P
Sbjct: 134 PRSPPPLLLLPESLPGSSASVPPPQPASSRCAESPGLGLRVWRP 177
>AK223088-1|BAD96808.1| 533|Homo sapiens F-box and leucine-rich
repeat protein 6 isoform 2 variant protein.
Length = 533
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 102 RASRGLVRRXCRQPPGGPSA 161
RA R RR RQPP GPSA
Sbjct: 58 RAQRRASRRTPRQPPRGPSA 77
>AK123170-1|BAC85547.1| 330|Homo sapiens protein ( Homo sapiens
cDNA FLJ41175 fis, clone BRACE2042550, highly similar
to Bos taurus mRNA for SCO-spondin. ).
Length = 330
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 95 WSPCLPGLSPSMXPSATRRAL 157
WSPC P L PS A+R AL
Sbjct: 194 WSPCGPCLPPSALAPASRTAL 214
>AK026590-1|BAB15503.1| 223|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22937 fis, clone KAT07960. ).
Length = 223
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 80 PXSYXWSPCLPGLSPSMXPSATRRALGRLSAX*P 181
P SY C P LSPS S T+ A G+ A P
Sbjct: 110 PGSYPTQSCHPHLSPSHPVSQTQHASGQKLASWP 143
>AK026541-1|BAB15499.1| 533|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22888 fis, clone KAT03934. ).
Length = 533
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 102 RASRGLVRRXCRQPPGGPSA 161
RA R RR RQPP GPSA
Sbjct: 58 RAQRRASRRTPRQPPRGPSA 77
>AC005067-2|AAD45960.1| 364|Homo sapiens WUGSC:H_RG122E10.2b
protein.
Length = 364
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 80 PXSYXWSPCLPGLSPSMXPSATRRALGRLSAX*P 181
P SY C P LSPS S T+ A G+ A P
Sbjct: 251 PGSYPTQSCHPHLSPSHPVSQTQHASGQKLASWP 284
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,740,736
Number of Sequences: 237096
Number of extensions: 1042767
Number of successful extensions: 2816
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2816
length of database: 76,859,062
effective HSP length: 71
effective length of database: 60,025,246
effective search space used: 1380580658
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -