Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0766.Seq
(451 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62; Fungi/... 71 1e-11
UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n... 71 2e-11
UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative... 69 6e-11
UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29; Euka... 66 3e-10
UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55; Euka... 63 3e-09
UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5; ... 62 5e-09
UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2; Cryptos... 62 5e-09
UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1; B... 61 9e-09
UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n... 60 3e-08
UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1; Encepha... 56 3e-07
UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3; ... 54 1e-06
UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, wh... 53 3e-06
UniRef50_Q9UZJ7 Cluster: 50S ribosomal protein L34e; n=8; Archae... 51 1e-05
UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1; A... 45 9e-04
UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3; ... 45 9e-04
UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3; Archae... 45 9e-04
UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=... 44 0.001
UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3; Methan... 42 0.005
UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilu... 42 0.006
UniRef50_Q8ZTJ2 Cluster: 50S ribosomal protein L34e; n=3; Pyroba... 39 0.058
UniRef50_UPI000155D215 Cluster: PREDICTED: similar to fucokinase... 36 0.41
UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4; Thermo... 36 0.41
UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5; Methanococ... 33 3.8
UniRef50_Q893X7 Cluster: Flagellin; n=1; Clostridium tetani|Rep:... 32 5.0
UniRef50_A1IBG0 Cluster: Glycosyltransferases involved in cell w... 32 5.0
UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;... 32 6.6
>UniRef50_P49207 Cluster: 60S ribosomal protein L34; n=62;
Fungi/Metazoa group|Rep: 60S ribosomal protein L34 -
Homo sapiens (Human)
Length = 117
Score = 70.9 bits (166), Expect = 1e-11
Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAERSRLC 234
RRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP RL
Sbjct: 9 RRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVLMRLS 68
Query: 235 YRKKTV 252
KK V
Sbjct: 69 KTKKHV 74
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/30 (76%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 346
YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 78 YGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>UniRef50_Q6E6C0 Cluster: Large subunit ribosomal protein L34e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L34e - Antonospora locustae (Nosema locustae)
Length = 113
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = +1
Query: 64 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRK 243
R +YN SNQ++I RTPG R VY KKP ++P+C +C+SKLRGI RPA +RL +
Sbjct: 10 RRTYNNASNQKKIRRTPGNRRVYIPKKKPGRVPKCVKCRSKLRGIDICRPAAFARLRKSQ 69
Query: 244 KTV 252
+TV
Sbjct: 70 RTV 72
Score = 33.9 bits (74), Expect = 1.6
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Frame = +2
Query: 206 LDLLNVPVFATVRK-Q*SV---YGGVLCHKCVKQRIVRAFLIEEQKIV 337
+D+ FA +RK Q +V YGG LC C++ RI+ AFL E++++
Sbjct: 54 IDICRPAAFARLRKSQRTVARTYGGNLCGSCLENRILDAFLSAEEQLL 101
>UniRef50_Q4WI54 Cluster: Ribosomal protein L34 protein, putative;
n=10; Eukaryota|Rep: Ribosomal protein L34 protein,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 192
Score = 68.5 bits (160), Expect = 6e-11
Identities = 31/60 (51%), Positives = 40/60 (66%)
Frame = +1
Query: 73 YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKKTV 252
YNT+SN+ RI++TPGG L Y ++KK P+CG C KL GI RP E S++ KKTV
Sbjct: 89 YNTRSNKVRIIKTPGGELRYLHIKKKGTAPKCGDCGIKLPGIPALRPREYSQISRPKKTV 148
Score = 47.2 bits (107), Expect = 2e-04
Identities = 22/27 (81%), Positives = 22/27 (81%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGG C CVK RIVRAFLIEEQKIVK
Sbjct: 152 YGGSRCAGCVKDRIVRAFLIEEQKIVK 178
>UniRef50_Q42351 Cluster: 60S ribosomal protein L34-1; n=29;
Eukaryota|Rep: 60S ribosomal protein L34-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 120
Score = 66.1 bits (154), Expect = 3e-10
Identities = 36/68 (52%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Frame = +1
Query: 58 YR-RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAE--RSR 228
YR R SY TKSNQ RIV+TPGG+LVYQ KK P+C +++GI RP+E RSR
Sbjct: 7 YRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSR 66
Query: 229 LCYRKKTV 252
L ++TV
Sbjct: 67 LSRNRRTV 74
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGGVL V++RI+RAFL+EEQKIVK
Sbjct: 78 YGGVLSGSAVRERIIRAFLVEEQKIVK 104
>UniRef50_P87262 Cluster: 60S ribosomal protein L34-A; n=55;
Eukaryota|Rep: 60S ribosomal protein L34-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 121
Score = 62.9 bits (146), Expect = 3e-09
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
RR YNT+SN+ ++V+TPGG L Q+VKK P+CG C S L+GI RP + + +
Sbjct: 9 RRNPYNTRSNKIKVVKTPGGILRAQHVKKLATRPKCGDCGSALQGISTLRPRQYATVSKT 68
Query: 241 KKTV 252
KTV
Sbjct: 69 HKTV 72
Score = 48.4 bits (110), Expect = 7e-05
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGG C CVK+RI+RAFLIEEQKIVK
Sbjct: 76 YGGSRCANCVKERIIRAFLIEEQKIVK 102
>UniRef50_Q7RF49 Cluster: Ribosomal protein L34e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L34e, putative -
Plasmodium yoelii yoelii
Length = 164
Score = 62.1 bits (144), Expect = 5e-09
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 YRRLS-YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLC 234
YR+ + YNTKSN+ R +RTPGG+L +KK P+C CK+ ++G++ RPA+ R
Sbjct: 7 YRKHNHYNTKSNKVRPIRTPGGKLTIHVIKKKAGKPKCADCKNPIQGVKALRPADNQRA- 65
Query: 235 YRKKTVK 255
RKK K
Sbjct: 66 -RKKDRK 71
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +2
Query: 242 RKQ*SVYGGVLCHKCVKQRIVRAFLIEEQKIVK 340
RK YGG +C KC K+RI+RAFL EEQK V+
Sbjct: 70 RKVSRAYGGSICAKCXKERIMRAFLFEEQKCVR 102
>UniRef50_Q5CVM8 Cluster: 60S ribosomal protein L34; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L34 -
Cryptosporidium parvum Iowa II
Length = 138
Score = 62.1 bits (144), Expect = 5e-09
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
R+ YNT SN+ R+V+TPGGR + Q + K P+CG CK L GI P E L R
Sbjct: 12 RKCRYNTPSNRVRVVKTPGGRNLIQNIGKVYSRPKCGDCKKPLAGIPACAPYEMKHLKKR 71
Query: 241 KKTV 252
++TV
Sbjct: 72 ERTV 75
Score = 46.8 bits (106), Expect = 2e-04
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGG C CV+QRI+RAFL+EEQK+VK
Sbjct: 79 YGGTKCPTCVRQRILRAFLLEEQKVVK 105
>UniRef50_A7AVD9 Cluster: Ribosomal protein L34, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L34, putative -
Babesia bovis
Length = 157
Score = 61.3 bits (142), Expect = 9e-09
Identities = 31/64 (48%), Positives = 39/64 (60%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
R YNT+SN++R V+TPGGRLV Q K + P+CG CK KL GI RP L R
Sbjct: 9 RHCRYNTRSNKQRKVKTPGGRLVVQRRVKVAQGPKCGDCKCKLAGIPALRPHLYRNLKKR 68
Query: 241 KKTV 252
++ V
Sbjct: 69 ERRV 72
Score = 50.0 bits (114), Expect = 2e-05
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGGV CHKCVK RI+RAFL EEQK +K
Sbjct: 76 YGGVRCHKCVKDRIIRAFLKEEQKALK 102
>UniRef50_Q4MZM9 Cluster: 60S ribosomal protein L34a, putative; n=4;
Eukaryota|Rep: 60S ribosomal protein L34a, putative -
Theileria parva
Length = 138
Score = 59.7 bits (138), Expect = 3e-08
Identities = 31/64 (48%), Positives = 35/64 (54%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
RR Y T SN + VRTPG RLV +KK K PRCG CK L G+ RP L R
Sbjct: 9 RRNKYKTPSNVVKRVRTPGARLVLHNLKKVGKRPRCGDCKRTLAGVSAVRPFLYKNLKRR 68
Query: 241 KKTV 252
+TV
Sbjct: 69 NRTV 72
Score = 45.6 bits (103), Expect = 5e-04
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGG CH CVK RI+RAFL EEQK V+
Sbjct: 76 YGGSRCHNCVKDRIIRAFLKEEQKCVR 102
>UniRef50_Q8SSA2 Cluster: 60S ribosomal protein L34; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L34
- Encephalitozoon cuniculi
Length = 110
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1
Query: 58 YRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSR 228
++ +Y T+SN+RR VRTP G+LV + VKK K RC +C + L I RPAE SR
Sbjct: 7 HKGATYKTRSNRRRKVRTPSGKLVNRRVKKHSKKHRCHECNAILGSIARMRPAEFSR 63
Score = 33.5 bits (73), Expect = 2.2
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIV 337
YG C +CV+++I+ AFL E++IV
Sbjct: 75 YGATTCGRCVREKIISAFLGNEERIV 100
>UniRef50_UPI000049A50B Cluster: 60S ribosomal protein L34; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L34 - Entamoeba histolytica HM-1:IMSS
Length = 137
Score = 54.4 bits (125), Expect = 1e-06
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
R+ SYNTKSN RIV+T GG + Q+ +K RCG C L GI+ RP + L
Sbjct: 9 RKHSYNTKSNGIRIVKTAGGNMTVQHRQKISNGVRCGDCGCVLAGIRHIRPHQYGWLGKS 68
Query: 241 KKTV 252
K+TV
Sbjct: 69 KRTV 72
Score = 46.0 bits (104), Expect = 4e-04
Identities = 17/28 (60%), Positives = 24/28 (85%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKV 343
YGGV CHKCV+++I+RAFLI E ++K+
Sbjct: 76 YGGVRCHKCVQKKILRAFLINEHNLIKL 103
>UniRef50_A0D0J3 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 108
Score = 52.8 bits (121), Expect = 3e-06
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSK--LRGIQPARPAERSRLC 234
RR SYNT+SN+ R V+TPGG +V QY K C L G++ RP + +L
Sbjct: 9 RRTSYNTRSNKIRKVKTPGGNVVVQYPNKKTSASTCADSNLNVVLNGLKRIRPTKLKQLA 68
Query: 235 YRKKTV 252
R++TV
Sbjct: 69 RRQRTV 74
Score = 39.5 bits (88), Expect = 0.033
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGGVL +K RI+RAFL+EE KIVK
Sbjct: 78 YGGVLSAGALKNRIIRAFLVEEVKIVK 104
>UniRef50_Q9UZJ7 Cluster: 50S ribosomal protein L34e; n=8;
Archaea|Rep: 50S ribosomal protein L34e - Pyrococcus
abyssi
Length = 91
Score = 51.2 bits (117), Expect = 1e-05
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 73 YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKK 246
Y ++S +R+ VRTPGGR+V + ++ KI C C L GI RP E +L KK
Sbjct: 5 YRSRSWRRKYVRTPGGRVVIHFERRKPKIAHCAICGRPLNGIPRGRPVEMRKLPKTKK 62
>UniRef50_Q17JY6 Cluster: Ribosomal protein L34, putative; n=1;
Aedes aegypti|Rep: Ribosomal protein L34, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 123
Score = 44.8 bits (101), Expect = 9e-04
Identities = 21/42 (50%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +1
Query: 64 RLSYNTKSNQRRIVRTPGG-RLVYQYVKKPKKIPRCGQCKSK 186
++SYNT N+RR+VRT G RLVY ++KK + + +C QCK +
Sbjct: 9 KMSYNT--NKRRVVRTLGSDRLVYLFIKKQRIVSKCCQCKGE 48
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
+GGV+CH+ +RI+RAFLI+EQK+VKVL
Sbjct: 71 FGGVICHR---ERIIRAFLIDEQKVVKVL 96
>UniRef50_A2DT99 Cluster: Ribosomal protein L34e, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein L34e,
putative - Trichomonas vaginalis G3
Length = 116
Score = 44.8 bits (101), Expect = 9e-04
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +1
Query: 61 RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
R L ++T N+ VRTPG +LV Y+ K + P C + ++ GI+ + E R+
Sbjct: 10 RSLGFHTIRNRVAPVRTPGNKLVAHYIAKRQNGPHCAETGKRINGIKCVKTCELRRMKKN 69
Query: 241 KKTV 252
++TV
Sbjct: 70 QRTV 73
>UniRef50_Q8TZB2 Cluster: 50S ribosomal protein L34e; n=3;
Archaea|Rep: 50S ribosomal protein L34e - Methanopyrus
kandleri
Length = 113
Score = 44.8 bits (101), Expect = 9e-04
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +1
Query: 73 YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAE 219
Y ++S +R RTPGGR V + KK P+CG C +L G+ R E
Sbjct: 6 YRSRSCRRVYKRTPGGRTVIHFEKKIPNWPKCGACGRRLNGVMRGRNVE 54
>UniRef50_Q4Q141 Cluster: 60S ribosomal protein L34, putative; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L34,
putative - Leishmania major
Length = 168
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +2
Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVK 340
YGGVL H V+ R+VRAFL+EEQ+IVK
Sbjct: 79 YGGVLSHDQVRDRVVRAFLVEEQRIVK 105
Score = 33.9 bits (74), Expect = 1.6
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 55 QYRR-LSYNTKSNQRRIVRTPGGRLVYQ 135
QYRR + Y T+ N+ ++VRTPG +LV Q
Sbjct: 7 QYRRRMHYATRGNRMKMVRTPGNKLVMQ 34
>UniRef50_O14396 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 97
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 100 IVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKKTVK 255
+++TPG + Y ++KK IPRCG L+GI +RL + KKTV+
Sbjct: 26 VIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALVLVSLTRLSHNKKTVQ 77
>UniRef50_O26137 Cluster: 50S ribosomal protein L34e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L34e -
Methanobacterium thermoautotrophicum
Length = 88
Score = 42.3 bits (95), Expect = 0.005
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +1
Query: 67 LSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKK 246
L Y ++S +R +TPGGR V Y +K C C L G+ RP E +L KK
Sbjct: 4 LRYRSRSYKRIFKKTPGGRTVTHYRRKKPSKHVCAGCGKPLHGVPRGRPYEIRKLSKSKK 63
>UniRef50_A1RXV1 Cluster: Ribosomal protein L34e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L34e - Thermofilum
pendens (strain Hrk 5)
Length = 91
Score = 41.9 bits (94), Expect = 0.006
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 64 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGI 198
R + ++S +R++VRTPGGRL + K P+C C ++G+
Sbjct: 3 RPALRSRSKKRKLVRTPGGRLALHVIDKKHDYPKCAICGRPIQGV 47
>UniRef50_Q8ZTJ2 Cluster: 50S ribosomal protein L34e; n=3;
Pyrobaculum|Rep: 50S ribosomal protein L34e -
Pyrobaculum aerophilum
Length = 84
Score = 38.7 bits (86), Expect = 0.058
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 64 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRC 168
R +Y ++S +R V+TPGGR V Y K+ K +P+C
Sbjct: 3 RPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPKC 37
>UniRef50_UPI000155D215 Cluster: PREDICTED: similar to fucokinase;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
fucokinase - Ornithorhynchus anatinus
Length = 853
Score = 35.9 bits (79), Expect = 0.41
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +1
Query: 58 YRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKI-PRCGQCKSKLRGIQPARPAERSRLC 234
Y ++ + + + R + R PG +LVY V++P+ + C S L G P + C
Sbjct: 381 YDYMTTSARDHLRNLTRPPGAQLVYSQVEEPQLLEDGCSVANSLLEGDVCLGPGSAIQHC 440
Query: 235 YRKKTVKCL 261
+ + V CL
Sbjct: 441 HLQSPVLCL 449
>UniRef50_P58026 Cluster: 50S ribosomal protein L34e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L34e - Aeropyrum
pernix
Length = 95
Score = 35.9 bits (79), Expect = 0.41
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +1
Query: 64 RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRL 231
R ++S +R RTPGG V Y ++ RC +C L G+ RP RL
Sbjct: 8 RPGLRSRSLRRVYRRTPGGSTVVHYERRKPGPARCARCGRPLGGVPRGRPPRVRRL 63
>UniRef50_Q6LZK0 Cluster: Ribosomal protein L34e; n=5;
Methanococcus|Rep: Ribosomal protein L34e -
Methanococcus maripaludis
Length = 89
Score = 32.7 bits (71), Expect = 3.8
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 73 YNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKK 246
Y + S+++ + PG + Y +K + CG C + L G+ R E ++L +K
Sbjct: 6 YKSGSSKKVYRKAPGNSSIVHYRRKKQSKAVCGACGALLNGVPRGRAVEITKLAKTEK 63
>UniRef50_Q893X7 Cluster: Flagellin; n=1; Clostridium tetani|Rep:
Flagellin - Clostridium tetani
Length = 280
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 16 DIVLLSMNVVS*WQYRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRG 195
+I+ L+ N+ S YR S N KSN + R G+ + P + + + + +RG
Sbjct: 3 NIMRLNHNLASLNVYREYSKNLKSNSVAMKRVSSGQKINSAKDDPNNLAKSERMRMNIRG 62
Query: 196 IQPA 207
+Q A
Sbjct: 63 LQMA 66
>UniRef50_A1IBG0 Cluster: Glycosyltransferases involved in cell wall
biogenesis-like; n=2; Candidatus Desulfococcus
oleovorans Hxd3|Rep: Glycosyltransferases involved in
cell wall biogenesis-like - Candidatus Desulfococcus
oleovorans Hxd3
Length = 720
Score = 32.3 bits (70), Expect = 5.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -1
Query: 235 SKDGNVQQV*LAGYHGVCSCTDHTLGSSWAFLHTDK-PSGHPVSLLFFFDLI 83
++ G + + G GV G+SW F + K PS HP+SL F+D +
Sbjct: 442 TRQGRLTALLCLGAIGVSQLVPALTGNSWFFYYLYKVPSSHPLSLENFYDFL 493
>UniRef50_UPI00003AD95B Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 1221
Score = 31.9 bits (69), Expect = 6.6
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 372 DLVLACCALRTFTIFCSSMRKALTMRCLTHLWQR 271
DL LA C T C+ AL CLT LW R
Sbjct: 421 DLTLAVCLSVFITFLCAFCLGALARPCLTRLWMR 454
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,759,804
Number of Sequences: 1657284
Number of extensions: 8206862
Number of successful extensions: 20916
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20910
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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