Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0766.Seq
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   1.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   2.3  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   5.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   9.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   9.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   9.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.4  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 298 ALLDTFMAEDTTINTSLFSYGSKDGNV 218
           +LL +F    TT    LF YG   GNV
Sbjct: 366 SLLTSFGGALTTFLVILFQYGGIHGNV 392


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 130 YQYVKKPKKI 159
           YQ VKKPKKI
Sbjct: 292 YQEVKKPKKI 301



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
 Frame = +1

Query: 199 QPARP-AERSRLCYRKKTVKCLWW 267
           QPA P     R CYR   V   WW
Sbjct: 247 QPAVPYVPFYRYCYRPYPVYNQWW 270


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 89  FDFVLYDSRRYCH 51
           FD+V Y+SR + H
Sbjct: 82  FDWVYYESRAHIH 94


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 99  NSKDTGWPLGLSVCK 143
           NS+   W LG  +CK
Sbjct: 130 NSRPETWVLGREMCK 144


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 99  NSKDTGWPLGLSVCK 143
           NS+   W LG  +CK
Sbjct: 130 NSRPETWVLGREMCK 144


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 157 SSWAFLHTDKPSGHPVSL 104
           +SWA    DK   HP ++
Sbjct: 31  ASWAIYRPDKGEYHPKNI 48


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 328 LFFNEEGSDNALLDTFMA 275
           +F+ +EGS + L D F A
Sbjct: 74  IFYCQEGSVDFLFDNFSA 91


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 328 LFFNEEGSDNALLDTFMA 275
           +F+ +EGS + L D F A
Sbjct: 307 IFYCQEGSVDFLFDNFSA 324


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 328 LFFNEEGSDNALLDTFMA 275
           +F+ +EGS + L D F A
Sbjct: 307 IFYCQEGSVDFLFDNFSA 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,763
Number of Sequences: 336
Number of extensions: 2157
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)