Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0766.Seq
         (451 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    26   0.71 
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   6.6  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   8.7  

>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 121 GHPVSLLFFFDLILCCTTVVDIAITKQHS*TTIQYLWSKF 2
           G  +S+L     +L   T+  +   K H+ T + YLW +F
Sbjct: 174 GKLLSMLLHLAGLLLPITLQMLTFLKNHTKTALLYLWGRF 213


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 206 LDLLNVPVFATVRKQ*SVYGGVLCHKCVKQ 295
           L + ++ VFA +  Q  +Y GVL  KC+K+
Sbjct: 276 LTMFSLSVFALMGLQ--IYMGVLTQKCIKE 303


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 278 GRGHHHKHFTVFLR 237
           GR HHH H +  +R
Sbjct: 431 GRHHHHHHHSALVR 444


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 219 FSRSSWLDTTEFALALTTP 163
           FSRS W D+  F   +T P
Sbjct: 293 FSRSIWADSIVFDSIITDP 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 439,266
Number of Sequences: 2352
Number of extensions: 9690
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)