Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0766.Seq
         (451 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p pro...   107   5e-24
AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,...   107   5e-24
AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,...   107   5e-24
AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB...   107   9e-24
AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA...   107   9e-24
AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p pro...   103   8e-23
AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA...    31   0.71 
AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-P...    29   3.8  
BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p pro...    28   6.7  
BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p pro...    28   6.7  
AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p pro...    28   6.7  
AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-P...    28   6.7  

>AY089676-1|AAL90414.1|  168|Drosophila melanogaster RH48056p
           protein.
          Length = 168

 Score =  107 bits (258), Expect = 5e-24
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = +1

Query: 61  RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
           RRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+ER R+  R
Sbjct: 9   RRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSERPRMSKR 68

Query: 241 KKTV 252
            KTV
Sbjct: 69  LKTV 72



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-925|AAN13422.1|  168|Drosophila melanogaster CG9354-PB,
           isoform B protein.
          Length = 168

 Score =  107 bits (258), Expect = 5e-24
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = +1

Query: 61  RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
           RRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+ER R+  R
Sbjct: 9   RRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSERPRMSKR 68

Query: 241 KKTV 252
            KTV
Sbjct: 69  LKTV 72



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-924|AAF54369.1|  168|Drosophila melanogaster CG9354-PA,
           isoform A protein.
          Length = 168

 Score =  107 bits (258), Expect = 5e-24
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = +1

Query: 61  RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
           RRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL+GI P+RP+ER R+  R
Sbjct: 9   RRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLKGITPSRPSERPRMSKR 68

Query: 241 KKTV 252
            KTV
Sbjct: 69  LKTV 72



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3917|AAN14070.1|  162|Drosophila melanogaster CG6090-PB,
           isoform B protein.
          Length = 162

 Score =  107 bits (256), Expect = 9e-24
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = +1

Query: 61  RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
           RRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+ER R+  R
Sbjct: 9   RRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPSERPRMSKR 68

Query: 241 KKTV 252
            KTV
Sbjct: 69  LKTV 72



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014297-3916|AAF56564.2|  162|Drosophila melanogaster CG6090-PA,
           isoform A protein.
          Length = 162

 Score =  107 bits (256), Expect = 9e-24
 Identities = 48/64 (75%), Positives = 54/64 (84%)
 Frame = +1

Query: 61  RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
           RRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI P+RP+ER R+  R
Sbjct: 9   RRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITPSRPSERPRMSKR 68

Query: 241 KKTV 252
            KTV
Sbjct: 69  LKTV 72



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AY071577-1|AAL49199.1|  162|Drosophila melanogaster RE63456p
           protein.
          Length = 162

 Score =  103 bits (248), Expect = 8e-23
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = +1

Query: 61  RRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYR 240
           RRLSYNT+SN+RRIVRTPGGRLVYQYVKK   +PRCGQCK KL GI  +RP+ER R+  R
Sbjct: 9   RRLSYNTRSNKRRIVRTPGGRLVYQYVKKNPTVPRCGQCKEKLHGITASRPSERPRMSKR 68

Query: 241 KKTV 252
            KTV
Sbjct: 69  LKTV 72



 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +2

Query: 260 YGGVLCHKCVKQRIVRAFLIEEQKIVKVL 346
           YGGVLCH C+++RIVRAFLIEEQKIVK L
Sbjct: 76  YGGVLCHSCLRERIVRAFLIEEQKIVKAL 104


>AE014134-1389|AAF52597.3| 2898|Drosophila melanogaster CG7466-PA
           protein.
          Length = 2898

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = -1

Query: 199 GYHG-VCSCTDHTLGSSWAFLHTD 131
           GY G +C  +DH  GSSW +L TD
Sbjct: 204 GYSGRLCDLSDHPAGSSWRWLATD 227


>AE014297-3919|AAF56566.1|  201|Drosophila melanogaster CG14551-PA
           protein.
          Length = 201

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +1

Query: 106 RTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRKKT 249
           + P G L+Y  + KP  + RC  C       + A P +R+     +K+
Sbjct: 115 KQPPGPLIYGMLPKPAVVGRCPTCSGNPERTEVAIPEQRTPWAPERKS 162


>BT022454-1|AAY54870.1|  135|Drosophila melanogaster IP05788p
           protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +1

Query: 64  RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRK 243
           +LSY TKSN   +++ P        VK  KK+ +  +CK + R ++  +  ++ +   +K
Sbjct: 80  QLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKVEKKKKKKKKKKKKKK 133

Query: 244 K 246
           K
Sbjct: 134 K 134


>BT022433-1|AAY54849.1|  135|Drosophila melanogaster IP05688p
           protein.
          Length = 135

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +1

Query: 64  RLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPRCGQCKSKLRGIQPARPAERSRLCYRK 243
           +LSY TKSN   +++ P        VK  KK+ +  +CK + R ++  +  ++ +   +K
Sbjct: 80  QLSYITKSNVNSVIKFPA-----MSVKDKKKLNKKNKCK-RTRKVEKKKKKKKKKKKKKK 133

Query: 244 K 246
           K
Sbjct: 134 K 134


>AY113610-1|AAM29615.1|  827|Drosophila melanogaster RH61467p
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 115 GGRLVYQYVKKPKKIPRCGQC 177
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


>AE014298-1218|AAF46401.2|  827|Drosophila melanogaster CG12772-PA
           protein.
          Length = 827

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 115 GGRLVYQYVKKPKKIPRCGQC 177
           GG L+Y + +K ++  RCG C
Sbjct: 777 GGELIYPWQRKVQRCDRCGAC 797


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,332,295
Number of Sequences: 53049
Number of extensions: 390777
Number of successful extensions: 1346
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)