Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0762.Seq
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 30 1.8
07_03_1315 - 25722757-25722876,25722972-25723328,25723924-257245... 30 1.8
05_01_0522 - 4506667-4507254,4507474-4507824,4507967-4508163,450... 30 1.8
11_01_0370 + 2814888-2814979,2815450-2815620,2815753-2815834,281... 29 2.4
05_05_0323 - 24098962-24099866,24099941-24100442 29 3.1
05_01_0608 + 5429901-5429982,5430610-5431058,5436758-5437183,543... 29 4.1
04_04_1334 - 32723950-32724121,32724527-32724558,32724665-327247... 29 4.1
05_03_0242 + 10823312-10823342,10823662-10823732,10824010-108240... 28 5.4
04_04_0500 - 25677767-25680850 28 5.4
03_02_0856 - 11815684-11815701,11816019-11816194,11817878-11818670 28 5.4
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273... 28 7.2
07_01_0164 + 1154942-1155124,1155193-1155199,1155900-1157446 28 7.2
01_06_1087 - 34430521-34430899,34432336-34432806,34432926-344331... 28 7.2
11_04_0102 - 13491071-13491415,13491427-13491720,13491799-13492323 27 9.5
11_03_0164 + 10972526-10972723,10972818-10973549,10974148-109742... 27 9.5
10_05_0036 + 8443957-8444112,8446063-8446129,8446685-8446743,844... 27 9.5
09_02_0604 - 11155149-11155542,11155656-11155848,11155929-111559... 27 9.5
07_01_0156 + 1106058-1107596 27 9.5
04_04_0631 - 26728144-26728228,26728321-26728398,26728584-267286... 27 9.5
01_01_0510 - 3723983-3724416,3724895-3725766,3725797-3726791,372... 27 9.5
>10_08_0324 +
16747117-16747330,16747432-16747559,16747675-16747744,
16747832-16747988,16748089-16748701,16749132-16749653,
16749686-16750279,16750359-16750709,16750808-16751395
Length = 1078
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -2
Query: 202 PAEDVRGAWRWSNVTKRLWALSTVLTQLPAKG*KWLPPSRKIHIKKWNIR 53
PA D W S + + +ALS +L QLP KW P +R+ ++ + +R
Sbjct: 234 PAMDAVPLWLASVICELWFALSWILDQLP----KWSPVTRETYLDRLALR 279
>07_03_1315 -
25722757-25722876,25722972-25723328,25723924-25724500,
25724577-25725265,25725487-25725822,25726190-25726527,
25726619-25726746,25726906-25727030,25727547-25727589,
25727714-25727802,25728396-25728511,25729157-25729276,
25729752-25729794
Length = 1026
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +2
Query: 32 YALPQQQPDIPLFYVNLPGRWQPLLPLCWQLRQNRRQCPEALRYVRPAPGPTNIF 196
Y LP Q PDIP + RW +C L ++ RPA G +F
Sbjct: 7 YGLPNQPPDIPQILLEAQNRWLRPTEICHILSNYKKFSIAPEPPNRPASGSLFLF 61
>05_01_0522 -
4506667-4507254,4507474-4507824,4507967-4508163,
4508324-4508582,4508656-4508868,4508946-4509071,
4509159-4509296,4509376-4509721,4509822-4510088,
4510427-4510616,4510700-4510784,4510885-4511072,
4511262-4511457,4512027-4512113
Length = 1076
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 202 PAEDVRGAWRWSNVTKRLWALSTVLTQLPAKG*KWLPPSRKIHIKKWNIR 53
P D G W S + + +ALS +L Q P KW P +R+ ++ + +R
Sbjct: 293 PVRDAYGLWLVSVICEIWFALSWLLDQFP----KWYPINRETYLDRLALR 338
>11_01_0370 +
2814888-2814979,2815450-2815620,2815753-2815834,
2816275-2816316,2816397-2816456,2816817-2816913,
2817382-2819024,2819155-2819256,2819369-2819509,
2819625-2819750,2819935-2820096
Length = 905
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 577 WESGYCSHSGSPAG 618
WE GYC H+ PAG
Sbjct: 35 WEDGYCGHASCPAG 48
>05_05_0323 - 24098962-24099866,24099941-24100442
Length = 468
Score = 29.1 bits (62), Expect = 3.1
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = -1
Query: 272 PLAFMQ----RSTAKTGRMGYALSETGPSGRCSWGLALVERNEAPLGI----VYGSDAVA 117
P+AF Q R A R+GY L E G G CS +V R E + V SDA A
Sbjct: 368 PIAFDQPIVARLVADEWRIGYGLRENGDGGGCS---GVVGREEIAAAVRRLMVMDSDAAA 424
Query: 116 SKGVK 102
++ K
Sbjct: 425 AEEAK 429
>05_01_0608 +
5429901-5429982,5430610-5431058,5436758-5437183,
5437270-5437643,5437655-5438113,5438191-5438361,
5438442-5438760
Length = 759
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 479 FISADQKWMDYAVDKKAIDTXRVRHCSAIAWSL*HRK-PACRKISPSTAKPTGL 321
FI+ D K++ +AIDT ++ S + W HRK P + P+ T L
Sbjct: 570 FIAVDFKYLRDLYRVRAIDTNLLKCYSLLTWKHVHRKAPHVALLDPAVVNKTTL 623
>04_04_1334 -
32723950-32724121,32724527-32724558,32724665-32724708,
32724962-32725123,32725984-32726422
Length = 282
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1
Query: 226 PMRPVFAVLLCINASGNMFR 285
P+ PVF VL I A+GN+FR
Sbjct: 117 PLEPVFRVLREIGAAGNLFR 136
>05_03_0242 +
10823312-10823342,10823662-10823732,10824010-10824021,
10827329-10827394,10827564-10827766,10827977-10828266,
10828377-10828468,10829876-10830344,10830670-10830978,
10831290-10831364,10831457-10831614
Length = 591
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 172 SARPHEHLPLGPVSERAYPMRPVFAVLLCINASGNMFRIANRQATAIQQ*SPVGFAVDGE 351
S R LPL S R Y + V A + + A G R+A + ++Q+ G +
Sbjct: 113 SLRSPFFLPLNRRSSRWYKLAGVLAARIVLGARGRTSRVAQKWRDSLQEGGKAGGVLSCP 172
Query: 352 IF 357
+F
Sbjct: 173 LF 174
>04_04_0500 - 25677767-25680850
Length = 1027
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 174 RQAPRTSSAGASFGESVSHAPSFCSASLHKCQREHVPDRQPPGDRHS 314
R AP +A S ++ S+A S S+ +C H D PP RHS
Sbjct: 27 RLAPAAVAALGSHPDASSYA-SLLSSLSRECHARHPFDASPPRARHS 72
>03_02_0856 - 11815684-11815701,11816019-11816194,11817878-11818670
Length = 328
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +2
Query: 173 APGPTNIFRWGQFRRERIPCAQ-FLQCFFA*MPAGTCSGSPTARRPPFSSEVQLVLLSM 346
A G N+F W Q RR R Q +Q A A S SP+A P ++ V + +
Sbjct: 81 AVGDANVFYWFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGL 139
>08_02_0210 +
14324539-14324609,14324735-14325740,14325838-14327390,
14327473-14327601,14328345-14328510
Length = 974
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = -3
Query: 351 FTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKKHCKNWAHGIRSLRNWPQRK 193
F ++ NWT + A+G P H+ + + CK + ++S+ W + +
Sbjct: 527 FQSETTDNWTWFMQQLHKAIGKPSHL---AISSEACKGLENAVKSVFPWAEHR 576
>07_01_0164 + 1154942-1155124,1155193-1155199,1155900-1157446
Length = 578
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 145 ALSTVLTQLPAKG*KWLPPSRKIH 74
A+ LTQLP + W+P SR +H
Sbjct: 322 AVRKELTQLPTQDFSWVPRSRSVH 345
>01_06_1087 -
34430521-34430899,34432336-34432806,34432926-34433112,
34433470-34433599,34433794-34434125,34434566-34435050,
34435185-34435752,34436579-34436640,34437569-34437636
Length = 893
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 266 PAGTCSGSPTARRPPFSSEVQLVLLSMVK 352
P+G+ SG PT RRPP S+ + +L++ +
Sbjct: 765 PSGS-SGQPTCRRPPQSALAPIAVLTVAR 792
>11_04_0102 - 13491071-13491415,13491427-13491720,13491799-13492323
Length = 387
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/46 (26%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -2
Query: 157 KRLWALSTVLTQLPAKG*KWLPPSRKIHIKKWNIR-LLLWKGITMR 23
K +++ +++ ++ A G ++ P R+ HI+KWN + ++ W+ T +
Sbjct: 170 KGFYSMVSLVVKMYASGAQF-QPQRQDHIEKWNAQDIMKWRDTTSK 214
>11_03_0164 +
10972526-10972723,10972818-10973549,10974148-10974285,
10974522-10974991,10975069-10975239,10975320-10975602,
10975682-10975795
Length = 701
Score = 27.5 bits (58), Expect = 9.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -1
Query: 479 FISADQK--WMDYAVDKKAIDTXRVRHCSAIAWSL*HRK-PACRKISPSTAKPTGL 321
FI+ D K W Y V +AIDT ++ S++ W HRK P + P+ T L
Sbjct: 486 FIAVDFKDLWDLYRV--RAIDTNLLKCYSSLTWKHVHRKVPHVALLDPAVVNETTL 539
>10_05_0036 +
8443957-8444112,8446063-8446129,8446685-8446743,
8446855-8446930,8447118-8447189,8447326-8447413,
8447489-8447744,8447934-8448049,8448247-8448470,
8448685-8448716,8448882-8449018,8449200-8449289,
8449383-8449557
Length = 515
Score = 27.5 bits (58), Expect = 9.5
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 96 NHFYPFAGNCVRTVDNAQRRFVTFDQRQAPRTSSAGASFGESVSHAPSFCSASLH 260
N + +A C + + + ++TF++ P T + A +S HAP CS LH
Sbjct: 174 NDYAVYAETCFQAFGDRVKHWITFNE---PHTVAVQAY--DSGMHAPGRCSVLLH 223
>09_02_0604 -
11155149-11155542,11155656-11155848,11155929-11155997,
11157088-11157214,11157362-11157615,11157725-11157879,
11158029-11158103,11158497-11158568,11158662-11158797,
11158892-11159367,11159994-11160601
Length = 852
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -3
Query: 417 TRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAG 265
T LLG +L + K + DS+T+ ++ + G + DPE+ G
Sbjct: 677 TNNILLGRNLKAKIADFGLSKTYHSDSQTHISASIAAGSMGYIDPEYYTTG 727
>07_01_0156 + 1106058-1107596
Length = 512
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 130 LTQLPAKG*KWLPPSRKIHIKKWN 59
LTQLP++ W+P + H K W+
Sbjct: 255 LTQLPSQDFTWVPYAESCHKKHWD 278
>04_04_0631 -
26728144-26728228,26728321-26728398,26728584-26728650,
26728748-26728824,26729961-26730012,26730248-26730294,
26730457-26730527
Length = 158
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 217 SPKLAPAEDVRGAWRWSNVTKRLWALSTVLTQLPAKG*KWL 95
S + AE + G+WR T+RL A++T+ Q+ WL
Sbjct: 16 SERAPMAEWMTGSWRSRTSTRRLSAITTLRVQIMVYCGSWL 56
>01_01_0510 -
3723983-3724416,3724895-3725766,3725797-3726791,
3727332-3727439
Length = 802
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = -3
Query: 327 WTSLLNGGRLAVGDPE-HVPAGIYAKKHCKNWAHGIRSLR 211
W + + R VG+ + HV + +NWA G+RS +
Sbjct: 129 WLDICDNNREPVGESKIHVKLQYFDVSKDRNWARGVRSTK 168
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,528,888
Number of Sequences: 37544
Number of extensions: 486478
Number of successful extensions: 1543
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1543
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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