Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0762.Seq
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p pro...    29   4.0  
AE014296-1808|AAN11924.1|  233|Drosophila melanogaster CG32056-P...    29   4.0  
AE014296-1807|AAN11923.1|  332|Drosophila melanogaster CG32056-P...    29   4.0  
AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-P...    29   4.0  
AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA...    29   5.3  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   5.3  
AY089286-1|AAL90024.1|  488|Drosophila melanogaster AT08344p pro...    29   7.0  
AJ012588-1|CAA10070.1|  480|Drosophila melanogaster Notchless pr...    29   7.0  
AE014134-128|AAF51479.2|  488|Drosophila melanogaster CG2863-PA ...    29   7.0  
AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA...    28   9.3  

>AY058486-1|AAL13715.1|  416|Drosophila melanogaster GM13876p
           protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 228 HAPSFCSASLHKCQREHVPDRQPPGDRHSAVKSSWFCC 341
           H P  CS+ L  C  + +    PPG+    ++  W  C
Sbjct: 274 HRPLACSSCLFPCCLQSIEVSAPPGNVIGTIEQEWSIC 311


>AE014296-1808|AAN11924.1|  233|Drosophila melanogaster CG32056-PB,
           isoform B protein.
          Length = 233

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 228 HAPSFCSASLHKCQREHVPDRQPPGDRHSAVKSSWFCC 341
           H P  CS+ L  C  + +    PPG+    ++  W  C
Sbjct: 91  HRPLACSSCLFPCCLQSIEVSAPPGNVIGTIEQEWSIC 128


>AE014296-1807|AAN11923.1|  332|Drosophila melanogaster CG32056-PC,
           isoform C protein.
          Length = 332

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 228 HAPSFCSASLHKCQREHVPDRQPPGDRHSAVKSSWFCC 341
           H P  CS+ L  C  + +    PPG+    ++  W  C
Sbjct: 190 HRPLACSSCLFPCCLQSIEVSAPPGNVIGTIEQEWSIC 227


>AE014296-1806|AAF50165.3|  416|Drosophila melanogaster CG32056-PA,
           isoform A protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = +3

Query: 228 HAPSFCSASLHKCQREHVPDRQPPGDRHSAVKSSWFCC 341
           H P  CS+ L  C  + +    PPG+    ++  W  C
Sbjct: 274 HRPLACSSCLFPCCLQSIEVSAPPGNVIGTIEQEWSIC 311


>AE014134-908|AAF52239.3| 2267|Drosophila melanogaster CG14023-PA
           protein.
          Length = 2267

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +3

Query: 171 QRQAPRTSSAGASFGESVSHAPSFCSASLHKCQREHVPDRQPPGDRHSAVKSSW 332
           Q+Q P+  S  A+ G +   APS  +  L     +HVP   PP    +AV S W
Sbjct: 594 QQQQPQMVSPAATPGPT---APSEMAGQLMPAN-QHVPAAPPPDYNQAAVNSRW 643


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
            protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +1

Query: 19   TVALLCPSTTATGYSTFLCESSGKVATT--FTPLLATASEP*TMPRGASLRSTSARPHEH 192
            T    CP+TT    +T  C +SG   TT   T   +T +   T PR  +  STS RP   
Sbjct: 965  TTCTSCPTTTTPRSTTTTC-TSGPTTTTPRSTTKTSTCAPTTTTPRSTTTTSTS-RPTTT 1022

Query: 193  LP 198
             P
Sbjct: 1023 TP 1024


>AY089286-1|AAL90024.1|  488|Drosophila melanogaster AT08344p
           protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 410 RHCSAIAWSL*HRKPACRKISPST 339
           +H + +AW   HR P CRK++ ++
Sbjct: 205 KHINCLAWEPYHRDPECRKLASAS 228


>AJ012588-1|CAA10070.1|  480|Drosophila melanogaster Notchless
           protein protein.
          Length = 480

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 410 RHCSAIAWSL*HRKPACRKISPST 339
           +H + +AW   HR P CRK++ ++
Sbjct: 197 KHINCLAWEPYHRDPECRKLASAS 220


>AE014134-128|AAF51479.2|  488|Drosophila melanogaster CG2863-PA
           protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -1

Query: 410 RHCSAIAWSL*HRKPACRKISPST 339
           +H + +AW   HR P CRK++ ++
Sbjct: 205 KHINCLAWEPYHRDPECRKLASAS 228


>AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA
           protein.
          Length = 548

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +2

Query: 59  IPLFYVNLPGRWQPLLPL--CWQLRQNRRQCPEALRYVRPAPGP 184
           +  F   +    +P  P+  C  L+ N+ +CP+    V+P P P
Sbjct: 377 VDAFLARMDSCLEPATPIKICHLLKNNKPKCPQIRLLVKPTPPP 420


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,935,684
Number of Sequences: 53049
Number of extensions: 764034
Number of successful extensions: 1963
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)