Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0761.Seq
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          27   0.63 
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    25   2.6  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    24   4.5  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   5.9  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   5.9  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   5.9  
DQ990877-1|ABJ90145.1|  105|Anopheles gambiae putative salivary ...    23   7.8  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 27.1 bits (57), Expect = 0.63
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 347 RAAIKKNSCEDQKELRS-TQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRSTVEVGA 523
           R+  K  S   +   RS ++ +SR+    RG   R+R  + R+ S+ R +RSRS   + A
Sbjct: 407 RSRSKSLSKSSRSRSRSLSRSVSRS--RSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPA 464



 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 377 DQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRST 508
           D K+  S  +     ++ R RS+       R+ SRG  +RSR++
Sbjct: 400 DGKKRSSRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSRSRSRTS 443


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 270 KETVPKNN-KRVTRSKGNVEAVIVDPVEPPSKR 365
           K+  P+N   RV R K   EA      EPPSKR
Sbjct: 106 KKYRPENPIARVQRLKAKAEAKAAGKEEPPSKR 138


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 262 WTYRGLLLTYPCS 224
           WTY G L T PCS
Sbjct: 194 WTYLGSLTTPPCS 206


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 589 TSSLRKHYSLPNPKTXSF*TQRTWDNEELFRQSVL 693
           +SSL K Y LP+ +  +   +R    E LF+ S L
Sbjct: 234 SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 589 TSSLRKHYSLPNPKTXSF*TQRTWDNEELFRQSVL 693
           +SSL K Y LP+ +  +   +R    E LF+ S L
Sbjct: 234 SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 589 TSSLRKHYSLPNPKTXSF*TQRTWDNEELFRQSVL 693
           +SSL K Y LP+ +  +   +R    E LF+ S L
Sbjct: 234 SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFL 268


>DQ990877-1|ABJ90145.1|  105|Anopheles gambiae putative salivary
           secreted peptide protein.
          Length = 105

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -3

Query: 133 SYLIIFVVTFVLHSRSSRLLNPMNSSLVTQFLIE 32
           SYLI ++V FVL S + R   P  +      L+E
Sbjct: 40  SYLIDYLVQFVLGSGNDRKTPPEAADYYQTALVE 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,029
Number of Sequences: 2352
Number of extensions: 15165
Number of successful extensions: 38
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)