Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0761.Seq
(765 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 35 0.28
AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 35 0.28
AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 35 0.28
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 35 0.28
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 35 0.28
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 33 1.1
Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)... 33 1.5
Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)... 33 1.5
Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)... 33 1.5
Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)... 33 1.5
DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding p... 33 1.5
BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein. 33 1.5
BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisia... 33 1.5
AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC... 33 1.5
AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b var... 33 1.5
AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens ... 33 1.5
AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein. 33 1.5
AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein. 33 1.5
AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding p... 33 1.5
BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein. 32 2.0
BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 2.0
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 32 2.0
AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein. 32 2.0
D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein. 31 6.0
BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type)... 31 6.0
BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type)... 31 6.0
BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type)... 31 6.0
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 35.1 bits (77), Expect = 0.28
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 347 RAAIKKNSCEDQKELRSTQQISRTPET-GRGRSKRARNIRGRNTSRG-RANRSRSTVE 514
R+ I++ S + RS ++ SR+P RGR R+R +R R+ SRG R RSRS V+
Sbjct: 444 RSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSR-LRRRSRSRGGRRRRSRSKVK 500
>AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 35.1 bits (77), Expect = 0.28
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 347 RAAIKKNSCEDQKELRSTQQISRTPET-GRGRSKRARNIRGRNTSRG-RANRSRSTVE 514
R+ I++ S + RS ++ SR+P RGR R+R +R R+ SRG R RSRS V+
Sbjct: 444 RSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSR-LRRRSRSRGGRRRRSRSKVK 500
>AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 35.1 bits (77), Expect = 0.28
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 347 RAAIKKNSCEDQKELRSTQQISRTPET-GRGRSKRARNIRGRNTSRG-RANRSRSTVE 514
R+ I++ S + RS ++ SR+P RGR R+R +R R+ SRG R RSRS V+
Sbjct: 444 RSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSR-LRRRSRSRGGRRRRSRSKVK 500
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 35.1 bits (77), Expect = 0.28
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 347 RAAIKKNSCEDQKELRSTQQISRTPET-GRGRSKRARNIRGRNTSRG-RANRSRSTVE 514
R+ I++ S + RS ++ SR+P RGR R+R +R R+ SRG R RSRS V+
Sbjct: 444 RSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSR-LRRRSRSRGGRRRRSRSKVK 500
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 35.1 bits (77), Expect = 0.28
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +2
Query: 347 RAAIKKNSCEDQKELRSTQQISRTPET-GRGRSKRARNIRGRNTSRG-RANRSRSTVE 514
R+ I++ S + RS ++ SR+P RGR R+R +R R+ SRG R RSRS V+
Sbjct: 465 RSPIRRRSRSPLRRSRSPRRRSRSPRRRDRGRRSRSR-LRRRSRSRGGRRRRSRSKVK 521
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +2
Query: 347 RAAIKKNSCEDQKELRSTQQISR-TPETGRGRSKRARNIRGRNTSRG-RANRSRSTVE 514
R+ I++ S + RS ++ SR T RGR R+R +R R+ SRG R RSRS V+
Sbjct: 444 RSPIRRRSRSPLRRSRSPRRRSRSTRRRDRGRRSRSR-LRRRSRSRGGRRRRSRSKVK 500
>Z69890-5|CAM26672.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>Z69890-4|CAM26671.1| 371|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 371
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>Z69890-2|CAM26670.1| 272|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 272
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 191 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 240
>Z69890-1|CAM26669.1| 170|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 170
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 43 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 92
>DQ431198-12|ABD95913.1| 325|Homo sapiens putative RNA-binding
protein Luc7-like 1 protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>BC065198-1|AAH65198.1| 354|Homo sapiens LUC7L protein protein.
Length = 354
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 227 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 276
>BC003194-1|AAH03194.1| 325|Homo sapiens LUC7-like (S. cerevisiae)
protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>AY005111-1|AAG22846.1| 371|Homo sapiens putative SR protein LUC7B1
protein.
Length = 371
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>AK223084-1|BAD96804.1| 371|Homo sapiens LUC7-like isoform b
variant protein.
Length = 371
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>AK001093-1|BAA91500.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ10231 fis, clone HEMBB1000226, weakly similar to
PUTATIVE PRE-MRNA SPLICING FACTOR ATP-DEPENDENT RNA
HELICASE ).
Length = 325
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>AJ404326-2|CAB93982.1| 371|Homo sapiens SR+89 protein.
Length = 371
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>AJ404326-1|CAB93981.1| 325|Homo sapiens SR+89 protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>AE006462-10|AAK61218.1| 325|Homo sapiens putative RNA binding
protein protein.
Length = 325
Score = 32.7 bits (71), Expect = 1.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 356 IKKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ +++E S + SRT + R RS+ R R R+TSR R SRS
Sbjct: 244 LRRREEREREERLSRRSGSRTRDRRRSRSRDRRRRRSRSTSRERRKLSRS 293
>BC105598-1|AAI05599.1| 259|Homo sapiens DDX46 protein protein.
Length = 259
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 359 KKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ D+K LR ++ R R RS+ R R+ SRGR +RS S
Sbjct: 58 RRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSS 106
>BC012304-1|AAH12304.1| 1031|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46 protein.
Length = 1031
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 359 KKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ D+K LR ++ R R RS+ R R+ SRGR +RS S
Sbjct: 58 RRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSS 106
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 359 KKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ D+K LR ++ R R RS+ R R+ SRGR +RS S
Sbjct: 58 RRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSS 106
>AB018344-1|BAA34521.2| 1058|Homo sapiens KIAA0801 protein protein.
Length = 1058
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +2
Query: 359 KKNSCEDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+++ D+K LR ++ R R RS+ R R+ SRGR +RS S
Sbjct: 84 RRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSS 132
>D49677-1|BAA08533.1| 482|Homo sapiens U2AF1-RS2 protein.
Length = 482
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 RSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+S ++ S++ E RS+ R R+ SRGR +RSRS
Sbjct: 406 KSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRS 443
>BC113480-1|AAI13481.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 RSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+S ++ S++ E RS+ R R+ SRGR +RSRS
Sbjct: 406 KSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRS 443
>BC113454-1|AAI13455.1| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 RSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+S ++ S++ E RS+ R R+ SRGR +RSRS
Sbjct: 406 KSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRS 443
>BC050451-1|AAH50451.2| 482|Homo sapiens zinc finger (CCCH type),
RNA-binding motif and serine/arginine rich 2 protein.
Length = 482
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +2
Query: 392 RSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
+S ++ S++ E RS+ R R+ SRGR +RSRS
Sbjct: 406 KSHKRTSKSRERHNSRSRGRNRDRSRDRSRGRGSRSRS 443
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,443,049
Number of Sequences: 237096
Number of extensions: 2060553
Number of successful extensions: 9040
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9015
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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