Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0761.Seq
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical p...    31   0.90 
Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical p...    31   0.90 
AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical...    31   0.90 
AC024777-4|AAF60561.3|  627|Caenorhabditis elegans Hypothetical ...    30   1.6  
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U41105-14|AAA82408.2|  399|Caenorhabditis elegans Hypothetical p...    29   2.7  
AL117207-22|CAO82073.1|  505|Caenorhabditis elegans Hypothetical...    29   4.8  
AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical ...    29   4.8  
AF125459-6|AAN60503.1|  219|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC024859-13|AAK29965.2|  338|Caenorhabditis elegans Hypothetical...    28   6.3  

>Z81038-14|CAI79153.1|  696|Caenorhabditis elegans Hypothetical
           protein C25A1.10b protein.
          Length = 696

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 240 NKRPRYVQVVKETVPKNNKRVTRSKGNVEAVIVDPVEPPSKRTRAKTKKNSEVRS----R 407
           N+ P+   +V + V K  KR+  S GN         EPP K+  AK   +S+       +
Sbjct: 42  NEAPKLKDIVTDNVFKKRKRIASSSGN---------EPPVKKMAAKDSSDSDSSDDGAVK 92

Query: 408 FHGRPRPAEVAQKE 449
            +G  +P  VA K+
Sbjct: 93  KNGVQKPVNVAAKK 106


>Z81038-13|CAB02755.1|  971|Caenorhabditis elegans Hypothetical
           protein C25A1.10a protein.
          Length = 971

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = +3

Query: 240 NKRPRYVQVVKETVPKNNKRVTRSKGNVEAVIVDPVEPPSKRTRAKTKKNSEVRS----R 407
           N+ P+   +V + V K  KR+  S GN         EPP K+  AK   +S+       +
Sbjct: 42  NEAPKLKDIVTDNVFKKRKRIASSSGN---------EPPVKKMAAKDSSDSDSSDDGAVK 92

Query: 408 FHGRPRPAEVAQKE 449
            +G  +P  VA K+
Sbjct: 93  KNGVQKPVNVAAKK 106


>AL117203-10|CAB60424.2|  855|Caenorhabditis elegans Hypothetical
           protein Y48C3A.14 protein.
          Length = 855

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 377 DQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGR 487
           ++   R+TQ   R    GRGR  R R  RGR   RGR
Sbjct: 819 EESRQRNTQAPRRGGGGGRGRGGRGRGGRGRGRGRGR 855


>AC024777-4|AAF60561.3|  627|Caenorhabditis elegans Hypothetical
           protein Y42H9AR.4 protein.
          Length = 627

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = +3

Query: 318 NVEAVIVDPVEPPSKRTRAKTKKNSEVRSRFHGRPRPAEVAQ----KELGILGVEIPAEV 485
           N  + + + V   SK   +  +KN ++RS F   P+PA         E G   +E+P+++
Sbjct: 386 NGHSSLTNGVNGHSKGPTSPKRKNGDIRSYFSATPKPATTTNTRKLSENGSEDIEMPSDI 445

Query: 486 VPIEA 500
              +A
Sbjct: 446 EDFDA 450


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 687 CTGKSSGNILNFNKENYRKLENRYS 761
           C+G S+G+++ FN  N RK   +YS
Sbjct: 93  CSGSSTGSVVMFNGSNVRKFGAKYS 117


>Z73978-2|CAA98292.2|  728|Caenorhabditis elegans Hypothetical
           protein ZC302.1 protein.
          Length = 728

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 377 DQKELRSTQQISRTPET-GRGRSKRARNIRGRNTSRGRANRSRSTVEV 517
           D++   S  + S+ P T GRGR  R      R T+RGR+N+  ST ++
Sbjct: 642 DEEMGSSISRHSKQPTTRGRGRGARGAGA-SRETTRGRSNKVVSTRQI 688


>U41105-14|AAA82408.2|  399|Caenorhabditis elegans Hypothetical
           protein T02G5.13a protein.
          Length = 399

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 509 QYSGFYWHDLCWYFDP*YS*LFLSDLCRSRASVKSA 402
           QYS  +W D   Y DP    LF S +  SRA++ SA
Sbjct: 50  QYSRVHWDDSVTYDDPNVQKLFKSLMSGSRAALASA 85


>AL117207-22|CAO82073.1|  505|Caenorhabditis elegans Hypothetical
           protein Y60A3A.27 protein.
          Length = 505

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 404 QISRTPETGRGRSKRARNIRGRNTSRGR 487
           Q +  P++GRG S R    RG N +RG+
Sbjct: 307 QWNSNPQSGRGNSYRQNGYRGANGNRGQ 334


>AF077531-1|AAC64610.1|  374|Caenorhabditis elegans Hypothetical
           protein F13C5.2 protein.
          Length = 374

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 413 RTPETGRGRSKRARNIRGRNTSRGRANRSRSTVEVG 520
           RTP +GRGR  R R   GR   RG A  + +TVE G
Sbjct: 32  RTP-SGRGRGGRGR---GRGRGRGGATAAGATVEGG 63


>AF125459-6|AAN60503.1|  219|Caenorhabditis elegans Hypothetical
           protein Y25C1A.8b protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 374 EDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
           E +K+ R   + SR  +    R KR+ + R R+  RG+ +RSRS
Sbjct: 122 EKEKDRRKMHKTSRERDRESHR-KRSNSPRDRDRKRGKRSRSRS 164


>AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical
           protein Y25C1A.8a protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +2

Query: 374 EDQKELRSTQQISRTPETGRGRSKRARNIRGRNTSRGRANRSRS 505
           E +K+ R   + SR  +    R KR+ + R R+  RG+ +RSRS
Sbjct: 248 EKEKDRRKMHKTSRERDRESHR-KRSNSPRDRDRKRGKRSRSRS 290


>AC084159-2|AAK39359.1|  659|Caenorhabditis elegans Hypothetical
           protein Y73B3A.1 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 282 PKNNKRVTRSKGNVEAVIVDPVEPPSKRTRAK--TKKNSEV 398
           PK+ K V +++  VE     P +PP+K T  K   KK  EV
Sbjct: 449 PKSEKAVEKAEEKVEKKPKSPQKPPAKPTAQKPPLKKTEEV 489


>AC024859-13|AAK29965.2|  338|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.17 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +3

Query: 285 KNNKRVTRSKGNVEAVIVDPVEPPSKRTRAKTKKNSEVRSRFHGR 419
           KNN++++RS+ +   V++ PV+         T++ + VR   + R
Sbjct: 109 KNNEKMSRSRMDAGGVVIQPVDEDDGGNELSTRRLAGVRFERNNR 153


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,535,913
Number of Sequences: 27780
Number of extensions: 344101
Number of successful extensions: 1226
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)