Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0739.Seq
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.1  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    23   9.1  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 461 KPRAGRFAAIFKKKCNEIIFYFYIFKLIREAK 556
           K  A R+A++ K++C+E   +F +FKL    K
Sbjct: 213 KQEADRYASL-KQECSEKQVHFQLFKLYHNEK 243


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 274  YDFHSKIIKCDKFHG 230
            YD H ++IK   FHG
Sbjct: 2273 YDDHDQLIKAKYFHG 2287


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 274  YDFHSKIIKCDKFHG 230
            YD H ++IK   FHG
Sbjct: 2283 YDDHDQLIKAKYFHG 2297


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +2

Query: 599 MKIPTLIENIEK 634
           MKIPT++ N+EK
Sbjct: 146 MKIPTVVANLEK 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,637
Number of Sequences: 2352
Number of extensions: 14317
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)