Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0736.Seq
         (347 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    27   0.055
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.17 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.39 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.39 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.39 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.39 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   4.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   6.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   6.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   6.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   6.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    20   8.3  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    20   8.3  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   8.3  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.055
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +2

Query: 14  ILFIYLYIYTHAYIRSFLIFIVYPISHALARVCRD 118
           +L ++LYI+T+  +  ++ +   PI H  + +  D
Sbjct: 132 VLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIIND 166


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = +1

Query: 1   VICKYFIYLF--IYIYACIH-SIVLNF 72
           V C YFIYLF   YIY  +H + ++NF
Sbjct: 146 VFC-YFIYLFTVYYIYYSVHEASIINF 171


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  KYFIYLFIYIYACI 51
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  KYFIYLFIYIYACI 51
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  KYFIYLFIYIYACI 51
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.39
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  KYFIYLFIYIYACI 51
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 1   VICKYFIYLFIYIYACIH 54
           ++C Y+ Y  + I  CI+
Sbjct: 282 LLCIYYFYCALIILLCIY 299



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = +1

Query: 1   VICKYFIYLFIYIYACIH 54
           ++C Y+ Y    I  C++
Sbjct: 97  LLCTYYFYYAFIILLCVY 114


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 208 SARIVLCVCCRARAVR 161
           +AR+V CVC  +   R
Sbjct: 914 TARVVRCVCAGSTGTR 929


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 160 CVLHAHGSTRIKLY 201
           C LH H S  +KL+
Sbjct: 227 CYLHQHLSKSVKLF 240


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   VICKYFIYLFIYIYACI 51
           V  ++F+Y+ +YI A +
Sbjct: 135 VSVQFFVYVILYILATV 151


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   VICKYFIYLFIYIYACI 51
           V  ++F+Y+ +YI A +
Sbjct: 135 VSVQFFVYVILYILATV 151


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 160 CVLHAHGSTRIKLY 201
           C LH H S  +KL+
Sbjct: 245 CYLHQHLSKSVKLF 258


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 160 CVLHAHGSTRIKLY 201
           C LH H S  +KL+
Sbjct: 506 CALHHHLSKLVKLF 519


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 160 CVLHAHGSTRIKLY 201
           C LH H S  +KL+
Sbjct: 231 CALHHHLSKLVKLF 244


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 74  IVYPISHALARVCRDD 121
           +  P +  LAR CRD+
Sbjct: 239 VTSPRARPLARTCRDN 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,172
Number of Sequences: 336
Number of extensions: 867
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)