Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0736.Seq
         (347 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010293-1|AAQ23611.1| 1103|Drosophila melanogaster LD19434p pro...    27   4.9  
AE014296-3549|AAF51732.2| 1103|Drosophila melanogaster CG33214-P...    27   4.9  
AY061004-1|AAL28552.1|  124|Drosophila melanogaster HL01958p pro...    27   6.5  

>BT010293-1|AAQ23611.1| 1103|Drosophila melanogaster LD19434p
           protein.
          Length = 1103

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 80  YPISHALARVCRDDIE 127
           Y +SH LA+ C+DDI+
Sbjct: 273 YRVSHGLAKACKDDIK 288


>AE014296-3549|AAF51732.2| 1103|Drosophila melanogaster CG33214-PA
           protein.
          Length = 1103

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 80  YPISHALARVCRDDIE 127
           Y +SH LA+ C+DDI+
Sbjct: 273 YRVSHGLAKACKDDIK 288


>AY061004-1|AAL28552.1|  124|Drosophila melanogaster HL01958p
           protein.
          Length = 124

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 23  IYLYIYTHAYIRSFLIFIVYPISHALARVC 112
           IY++IYTH YI S L+ ++  I +  AR+C
Sbjct: 67  IYIHIYTHTYI-SVLVSLLLRI-YRPARLC 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,714,886
Number of Sequences: 53049
Number of extensions: 128025
Number of successful extensions: 370
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)